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The map label for this gene is yadS [H]

Identifier: 153947152

GI number: 153947152

Start: 3739710

End: 3740324

Strand: Direct

Name: yadS [H]

Synonym: YpsIP31758_3327

Alternate gene names: 153947152

Gene position: 3739710-3740324 (Clockwise)

Preceding gene: 153946963

Following gene: 153949232

Centisome position: 79.18

GC content: 50.73

Gene sequence:

>615_bases
ATGCTGGTTTATTGGCTGGATATCTTAGGTACTGCGGTATTTGCTATCTCTGGTGTATTACTGGCAGGAAAACTACGTAT
GGATCCATTTGGCGTACTGGTTTTGGGGGTGGTTACTGCCGTCGGGGGTGGCACGATCCGTGACATGGCATTAGCCAATG
GCCCGGTATTTTGGGTGAAAGATCCCACCGATCTAGTCGTGGCCATGGTGACCTGTCTGGCTACCATCGTACTGGTACGT
CAACCCAGGCGCACGGCAAAATGGATCCTGCCGGTGTTAGATGCGATTGGTTTAGCGGTGTTCGTCGGTATCGGGGTTAA
TAAAGCTTTTGCCGCCGATGCCAGCCCATTAGTGGCTATCTGTATGGGCGTAATAACTGGTGTCGGAGGTGGGATTATTC
GTGACGTCTTAGCCCGTGAGATTCCGATGATCCTGCGTACTGAGATTTATGCGACGGCCTGTATTATTGGCGGGATCGTG
CATGCCACCGCGTTCTATACATTTAACATGCCATTACAGCAAGCCATGATGTTGGGCATGGTGATAACCCTCGGTATTCG
GCTCGCCGCAATCCGTTGGCATTTAAAACTACCAACCTTCGAAATAGAGCATTGA

Upstream 100 bases:

>100_bases
AAGACTGGTTTAATCGCGCCAGCCCACGTATCCTGCTGGCCGCTCAACAGCTGTGCCAACAAATGGCCAGCATTCCAACC
CCTGTCGCGGAGTCACATTA

Downstream 100 bases:

>100_bases
GATATTACTGTCGAATAATCATCTTTGAGCATAAAAAACCGCGGCCATTCTCATGGTCACGGTTTTTTAGCGATGCTTTA
GTTTTAACGATGCTTTAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MLVYWLDILGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALANGPVFWVKDPTDLVVAMVTCLATIVLVR
QPRRTAKWILPVLDAIGLAVFVGIGVNKAFAADASPLVAICMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIV
HATAFYTFNMPLQQAMMLGMVITLGIRLAAIRWHLKLPTFEIEH

Sequences:

>Translated_204_residues
MLVYWLDILGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALANGPVFWVKDPTDLVVAMVTCLATIVLVR
QPRRTAKWILPVLDAIGLAVFVGIGVNKAFAADASPLVAICMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIV
HATAFYTFNMPLQQAMMLGMVITLGIRLAAIRWHLKLPTFEIEH
>Mature_204_residues
MLVYWLDILGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALANGPVFWVKDPTDLVVAMVTCLATIVLVR
QPRRTAKWILPVLDAIGLAVFVGIGVNKAFAADASPLVAICMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIV
HATAFYTFNMPLQQAMMLGMVITLGIRLAAIRWHLKLPTFEIEH

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI1786352, Length=204, Percent_Identity=86.2745098039216, Blast_Score=328, Evalue=2e-91,
Organism=Escherichia coli, GI87082304, Length=152, Percent_Identity=40.1315789473684, Blast_Score=108, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 21768; Mature: 21768

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVYWLDILGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALANGPVFWVK
CEEEHHHHHHHHHHHHHHHHHHCEECCCHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEE
DPTDLVVAMVTCLATIVLVRQPRRTAKWILPVLDAIGLAVFVGIGVNKAFAADASPLVAI
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHH
CMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIVHATAFYTFNMPLQQAMMLGM
HHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHH
VITLGIRLAAIRWHLKLPTFEIEH
HHHHHHHHHHHEEEEECCEEECCC
>Mature Secondary Structure
MLVYWLDILGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGGTIRDMALANGPVFWVK
CEEEHHHHHHHHHHHHHHHHHHCEECCCHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEE
DPTDLVVAMVTCLATIVLVRQPRRTAKWILPVLDAIGLAVFVGIGVNKAFAADASPLVAI
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHH
CMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIVHATAFYTFNMPLQQAMMLGM
HHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHH
VITLGIRLAAIRWHLKLPTFEIEH
HHHHHHHHHHHEEEEECCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]