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The map label for this gene is 153937277

Identifier: 153937277

GI number: 153937277

Start: 733196

End: 733951

Strand: Direct

Name: 153937277

Synonym: CLC_0713

Alternate gene names: NA

Gene position: 733196-733951 (Clockwise)

Preceding gene: 153934980

Following gene: 153935957

Centisome position: 19.5

GC content: 26.85

Gene sequence:

>756_bases
ATGGACAATAAAAGAATCCAGGAATTAAAGGAAGTCTTAAAAAATTTAAATAAAGTTGGAATTAATGATGAAATAAGAAA
AGAAGCTTTAGATTTAGTAAAAGATATTGATGCTATAGATTTATCTATAGCAGAACAACAACTTATAGAAGAAGGAATGG
AGCCACAGGATTTAAGGCATTTGTGTGATGTACACATGGAAGTTTTAAAGGACGAATTAAGTAAAATAAAGACAAAGATA
AGTAAGGGTCATGTGGTGTATACTTTAATAGATGAACATGATAAGATTTTGAGATTCTTAGAAGATTTAGAAAAAGTGAA
TTCAGATATTCAAAATACTAAAAGCTATAATGAAGCTAAAGAAAAAATTCATAGTCTTCATAATCTAGCAGAAAGTATAT
TAGATGCAGAAAATCATCACCAAAGAGAAGAAAAAGTTTTATTTGTAGAGATGGAAAAAAGAGAAATAACAGGACCTACA
AGAATAATGAGAATGGAACATGATGACCTAAGAGCTAGAAAAAAAGAATTAAAGAGACTTTCTGAAAATGCAGATAAAAT
GGAATTTGATGAGTTCAAAAATAAAGTAGATGAAGTTTCAAAATATATAATTTTTAATTTAAGAGATCATATTTTTAAAG
AAAACTATATTTTATATCCATCATCCTTAGAAGCCATAAAGGGAAAGAATATATGGGATGATATGAAAAAAAGATGTGAT
GAAATAGGATATTGTAGCTTTACATTTGAAAGTTAA

Upstream 100 bases:

>100_bases
AAGATTCATAGCTTAGAGAAGGATTTATTTATCCATATATACAAAGAAAACAGCGTATTATTTGAGATGATTTAAAGCTG
GTATAGAGGAGATGATTTAA

Downstream 100 bases:

>100_bases
AAATAGCTTGATATTTATAAATAAAAAAATAAGACCGTCATTATTGACTGTCTTATTTTTTATAATTTATATTTAAGCTT
TTAAATTAGTTTTATTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: Sensory Box Protein; PAS Domain S-Box

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MDNKRIQELKEVLKNLNKVGINDEIRKEALDLVKDIDAIDLSIAEQQLIEEGMEPQDLRHLCDVHMEVLKDELSKIKTKI
SKGHVVYTLIDEHDKILRFLEDLEKVNSDIQNTKSYNEAKEKIHSLHNLAESILDAENHHQREEKVLFVEMEKREITGPT
RIMRMEHDDLRARKKELKRLSENADKMEFDEFKNKVDEVSKYIIFNLRDHIFKENYILYPSSLEAIKGKNIWDDMKKRCD
EIGYCSFTFES

Sequences:

>Translated_251_residues
MDNKRIQELKEVLKNLNKVGINDEIRKEALDLVKDIDAIDLSIAEQQLIEEGMEPQDLRHLCDVHMEVLKDELSKIKTKI
SKGHVVYTLIDEHDKILRFLEDLEKVNSDIQNTKSYNEAKEKIHSLHNLAESILDAENHHQREEKVLFVEMEKREITGPT
RIMRMEHDDLRARKKELKRLSENADKMEFDEFKNKVDEVSKYIIFNLRDHIFKENYILYPSSLEAIKGKNIWDDMKKRCD
EIGYCSFTFES
>Mature_251_residues
MDNKRIQELKEVLKNLNKVGINDEIRKEALDLVKDIDAIDLSIAEQQLIEEGMEPQDLRHLCDVHMEVLKDELSKIKTKI
SKGHVVYTLIDEHDKILRFLEDLEKVNSDIQNTKSYNEAKEKIHSLHNLAESILDAENHHQREEKVLFVEMEKREITGPT
RIMRMEHDDLRARKKELKRLSENADKMEFDEFKNKVDEVSKYIIFNLRDHIFKENYILYPSSLEAIKGKNIWDDMKKRCD
EIGYCSFTFES

Specific function: Unknown

COG id: COG2461

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29745; Mature: 29745

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNKRIQELKEVLKNLNKVGINDEIRKEALDLVKDIDAIDLSIAEQQLIEEGMEPQDLRH
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LCDVHMEVLKDELSKIKTKISKGHVVYTLIDEHDKILRFLEDLEKVNSDIQNTKSYNEAK
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKIHSLHNLAESILDAENHHQREEKVLFVEMEKREITGPTRIMRMEHDDLRARKKELKRL
HHHHHHHHHHHHHHCCHHHHHHHHHEEEEEEHHHHCCCHHHHHHCCHHHHHHHHHHHHHH
SENADKMEFDEFKNKVDEVSKYIIFNLRDHIFKENYILYPSSLEAIKGKNIWDDMKKRCD
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHCCCCHHHHHHHHHH
EIGYCSFTFES
HCCCCEEEECC
>Mature Secondary Structure
MDNKRIQELKEVLKNLNKVGINDEIRKEALDLVKDIDAIDLSIAEQQLIEEGMEPQDLRH
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LCDVHMEVLKDELSKIKTKISKGHVVYTLIDEHDKILRFLEDLEKVNSDIQNTKSYNEAK
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKIHSLHNLAESILDAENHHQREEKVLFVEMEKREITGPTRIMRMEHDDLRARKKELKRL
HHHHHHHHHHHHHHCCHHHHHHHHHEEEEEEHHHHCCCHHHHHHCCHHHHHHHHHHHHHH
SENADKMEFDEFKNKVDEVSKYIIFNLRDHIFKENYILYPSSLEAIKGKNIWDDMKKRCD
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHCCCCHHHHHHHHHH
EIGYCSFTFES
HCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA