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The map label for this gene is ytfE [H]

Identifier: 153934980

GI number: 153934980

Start: 732472

End: 733170

Strand: Direct

Name: ytfE [H]

Synonym: CLC_0712

Alternate gene names: 153934980

Gene position: 732472-733170 (Clockwise)

Preceding gene: 153937456

Following gene: 153937277

Centisome position: 19.48

GC content: 26.47

Gene sequence:

>699_bases
ATGAAAAACACTATTAATATAAATCAAAAGCTTGGGGAGGTTGTTTCCATATTCCCAGGATCAAGTAGAATATTCAATGA
TGTAAAAATAGATTATTGCTGTGGTGGACATGATACTTTAGGAGAAGCCTTAAAGGAAAAAGGAATAAATTCAGATGAAT
TCATAGAAAAACTTAATGAAGAATATGAAAAGTTTGTAGAATCTAATGAAGAGTATATAGATTGGAGAAAAGAAAAACCA
GTAAATCTTATGGAAAATATAGTAGATACTCATCATGATTATACAAAAAGAGAGCTTAAAGAAATAGATGCACTACTATC
AAAAATATTAAAAGTTCATTTTGGACATCATGGAGAAGAATTATTAAAAGTTCATAGATTATTTGGACTTTTAAAGATAG
AATTAGAAGAACATTTAATAAAGGAAGAAGAAAATTTATTTCCATTAATAAAAGAATATGAAGTGACTAAAGATGAAAAT
GTAAAAAGAGAAATAGACAAATTTATAAAAGAAACAGAAGATGAACATGATAAAGCCGGAGATATATTAAAAGAATTAGA
AAAAATAACAAGAGATTTCAAAGCACCAGAGGATGCATGTACAAGCTATAGATTAACTTATGATAAGATTCATAGCTTAG
AGAAGGATTTATTTATCCATATATACAAAGAAAACAGCGTATTATTTGAGATGATTTAA

Upstream 100 bases:

>100_bases
CAACTATATTTATAGCAGATTTATTATTAAATTCAATATAAGGATTATACTAAGTAATTATGAGAAATAAATTAGTTACT
TTAATTTAGGAGGAATTGTT

Downstream 100 bases:

>100_bases
AGCTGGTATAGAGGAGATGATTTAAATGGACAATAAAAGAATCCAGGAATTAAAGGAAGTCTTAAAAAATTTAAATAAAG
TTGGAATTAATGATGAAATA

Product: putative scdA protein

Products: NA

Alternate protein names: RCMNS [H]

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MKNTININQKLGEVVSIFPGSSRIFNDVKIDYCCGGHDTLGEALKEKGINSDEFIEKLNEEYEKFVESNEEYIDWRKEKP
VNLMENIVDTHHDYTKRELKEIDALLSKILKVHFGHHGEELLKVHRLFGLLKIELEEHLIKEEENLFPLIKEYEVTKDEN
VKREIDKFIKETEDEHDKAGDILKELEKITRDFKAPEDACTSYRLTYDKIHSLEKDLFIHIYKENSVLFEMI

Sequences:

>Translated_232_residues
MKNTININQKLGEVVSIFPGSSRIFNDVKIDYCCGGHDTLGEALKEKGINSDEFIEKLNEEYEKFVESNEEYIDWRKEKP
VNLMENIVDTHHDYTKRELKEIDALLSKILKVHFGHHGEELLKVHRLFGLLKIELEEHLIKEEENLFPLIKEYEVTKDEN
VKREIDKFIKETEDEHDKAGDILKELEKITRDFKAPEDACTSYRLTYDKIHSLEKDLFIHIYKENSVLFEMI
>Mature_232_residues
MKNTININQKLGEVVSIFPGSSRIFNDVKIDYCCGGHDTLGEALKEKGINSDEFIEKLNEEYEKFVESNEEYIDWRKEKP
VNLMENIVDTHHDYTKRELKEIDALLSKILKVHFGHHGEELLKVHRLFGLLKIELEEHLIKEEENLFPLIKEYEVTKDEN
VKREIDKFIKETEDEHDKAGDILKELEKITRDFKAPEDACTSYRLTYDKIHSLEKDLFIHIYKENSVLFEMI

Specific function: Involved in anaerobic NO protection [H]

COG id: COG2846

COG function: function code D; Regulator of cell morphogenesis and NO signaling

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790654, Length=222, Percent_Identity=31.5315315315315, Blast_Score=114, Evalue=5e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007500
- InterPro:   IPR019903
- InterPro:   IPR012312 [H]

Pfam domain/function: PF01814 Hemerythrin; PF04405 ScdA_N [H]

EC number: NA

Molecular weight: Translated: 27428; Mature: 27428

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTININQKLGEVVSIFPGSSRIFNDVKIDYCCGGHDTLGEALKEKGINSDEFIEKLNE
CCCCCCHHHHHHHHHHHCCCCCHHHHCCEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHH
EYEKFVESNEEYIDWRKEKPVNLMENIVDTHHDYTKRELKEIDALLSKILKVHFGHHGEE
HHHHHHHCCHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LLKVHRLFGLLKIELEEHLIKEEENLFPLIKEYEVTKDENVKREIDKFIKETEDEHDKAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHH
DILKELEKITRDFKAPEDACTSYRLTYDKIHSLEKDLFIHIYKENSVLFEMI
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEECC
>Mature Secondary Structure
MKNTININQKLGEVVSIFPGSSRIFNDVKIDYCCGGHDTLGEALKEKGINSDEFIEKLNE
CCCCCCHHHHHHHHHHHCCCCCHHHHCCEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHH
EYEKFVESNEEYIDWRKEKPVNLMENIVDTHHDYTKRELKEIDALLSKILKVHFGHHGEE
HHHHHHHCCHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LLKVHRLFGLLKIELEEHLIKEEENLFPLIKEYEVTKDENVKREIDKFIKETEDEHDKAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHH
DILKELEKITRDFKAPEDACTSYRLTYDKIHSLEKDLFIHIYKENSVLFEMI
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA