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The map label for this gene is pbl [H]

Identifier: 153930583

GI number: 153930583

Start: 28986

End: 29492

Strand: Direct

Name: pbl [H]

Synonym: YpsIP31758_A0005

Alternate gene names: 153930583

Gene position: 28986-29492 (Clockwise)

Preceding gene: 153930604

Following gene: 153930609

Centisome position: 49.4

GC content: 36.69

Gene sequence:

>507_bases
ATGAAAGATATAGCTCAGGGATTTATATTGATACTAACGTTATTAGTGCCACTAAGTAGTTATGCATATTGCTTTCAAGC
AGCTGGTGACACTTATCAAATAGACCCTTTATTGCTTATATCTATCGCTGATGTAGAAAGTAGTATGAATTATAAAGCTA
TCGGGCAAAATAAAAAGAATGGCGTAGTGAAGTCAGAAGACCTTGGGCTAATGCAGATAAATACATCTTGGCTACCAAAG
CTAGGGAAATCATTCGGTATTACTCGTGAGCATCTATTAAATAACCCCTGTCAGAATGTTTATGTCGGGGCTTATGTTTT
AGCAAATAACATATCTAGCAATGGTGTTAATTGGGAGTCAATTGGTGCTTATAACGCCGGTTTTAAAAGCGCGAATGAAG
AGTTTAGGCTTAGGTATGCTAAAAAAGTATACAGTAAATACATAAATTTATTGCGTGGCAATAGAGCGATAATTATTGCC
AAGGCAAGTCGAGGCGAACGGGTATAA

Upstream 100 bases:

>100_bases
TTACGCAAAAATAGCGGGAAAAGAGAAAGTACCGTTTGTTCCCTTTATCTTATTTTCGCTACTTGTATTTTCTACTATAT
AACCAATTTGGAATGCACAG

Downstream 100 bases:

>100_bases
AGTCATAAATAAAAGGAGTCACAGATGAGCATAAACAATAAAGACATTGAATTATTAAAACTAATTCTAATTAATAGAGA
TAAAGATATAGTTAAAATGA

Product: transglycosylase SLT domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MKDIAQGFILILTLLVPLSSYAYCFQAAGDTYQIDPLLLISIADVESSMNYKAIGQNKKNGVVKSEDLGLMQINTSWLPK
LGKSFGITREHLLNNPCQNVYVGAYVLANNISSNGVNWESIGAYNAGFKSANEEFRLRYAKKVYSKYINLLRGNRAIIIA
KASRGERV

Sequences:

>Translated_168_residues
MKDIAQGFILILTLLVPLSSYAYCFQAAGDTYQIDPLLLISIADVESSMNYKAIGQNKKNGVVKSEDLGLMQINTSWLPK
LGKSFGITREHLLNNPCQNVYVGAYVLANNISSNGVNWESIGAYNAGFKSANEEFRLRYAKKVYSKYINLLRGNRAIIIA
KASRGERV
>Mature_168_residues
MKDIAQGFILILTLLVPLSSYAYCFQAAGDTYQIDPLLLISIADVESSMNYKAIGQNKKNGVVKSEDLGLMQINTSWLPK
LGKSFGITREHLLNNPCQNVYVGAYVLANNISSNGVNWESIGAYNAGFKSANEEFRLRYAKKVYSKYINLLRGNRAIIIA
KASRGERV

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iagB/ipgF/P19 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008258 [H]

Pfam domain/function: PF01464 SLT [H]

EC number: NA

Molecular weight: Translated: 18632; Mature: 18632

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDIAQGFILILTLLVPLSSYAYCFQAAGDTYQIDPLLLISIADVESSMNYKAIGQNKKN
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEEEECCCCCCCEEECCCCCCC
GVVKSEDLGLMQINTSWLPKLGKSFGITREHLLNNPCQNVYVGAYVLANNISSNGVNWES
CCEECCCCCEEEECCHHHHHHHHHCCCCHHHHHCCCCCHHEEHHEEEECCCCCCCCCHHH
IGAYNAGFKSANEEFRLRYAKKVYSKYINLLRGNRAIIIAKASRGERV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MKDIAQGFILILTLLVPLSSYAYCFQAAGDTYQIDPLLLISIADVESSMNYKAIGQNKKN
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEEEECCCCCCCEEECCCCCCC
GVVKSEDLGLMQINTSWLPKLGKSFGITREHLLNNPCQNVYVGAYVLANNISSNGVNWES
CCEECCCCCEEEECCHHHHHHHHHCCCCHHHHHCCCCCHHEEHHEEEECCCCCCCCCHHH
IGAYNAGFKSANEEFRLRYAKKVYSKYINLLRGNRAIIIAKASRGERV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]