Definition Yersinia pseudotuberculosis IP 31758 plasmid_59kb, complete sequence.
Accession NC_009704
Length 58,679

Click here to switch to the map view.

The map label for this gene is 153930604

Identifier: 153930604

GI number: 153930604

Start: 28344

End: 28967

Strand: Direct

Name: 153930604

Synonym: YpsIP31758_A0004

Alternate gene names: NA

Gene position: 28344-28967 (Clockwise)

Preceding gene: 153930618

Following gene: 153930583

Centisome position: 48.3

GC content: 40.22

Gene sequence:

>624_bases
TTGGCTAACATCCTGTTTTTTTTAGTATCAATAATCACAACAACGGCTATTGCATATTTACTACCAGCTATTGTTTCAAG
AGCAGAGCAGGAAGTCCTTTCACAGTATGACGAAGTTAAGTTAGCGTCACAATATCGAACAGCGGTTGAACCTTTGCTGG
CTCTTTTCCTGGCTTGTGTGGCTCCTGTTTTTTATGCGGTACAAAGTGATATCACTTTGTCTGTGTTTATTGGCTTGTTA
GCGCTAGTGAGTTACATCGATATAATGAGGCAATGGGTGCCAGATATCTTAATCCATTTGCTGAGCTGGTACAGCCTGAG
TTGCTTAGCGCTTGGATTCATTACTTCAGATGTGCTCTATTCACTGCTTTCCTTACTGCTATTGCTGCTACCGTTCCTTG
CTATCAATGCTTACAGTTGGATAAAGAATAGGAGCTACATCTATGCATCGGGTGATATCTACATTTTACTCTCTGTCGGC
CTATGGCTAGATTATCGTTTTGCTTTATCAGCTGCCGCGCTAAGCATTTTATCCGCATCAATTTACGCAAAAATAGCGGG
AAAAGAGAAAGTACCGTTTGTTCCCTTTATCTTATTTTCGCTACTTGTATTTTCTACTATATAA

Upstream 100 bases:

>100_bases
TAACAGACAGTAACAGCATAATAACCAATTTGGGGCCAATTCCTAAACCGTCCGTAATTCCACAGAACTATATTGTGTAT
ATGATTTGAGGAATATTCTA

Downstream 100 bases:

>100_bases
CCAATTTGGAATGCACAGATGAAAGATATAGCTCAGGGATTTATATTGATACTAACGTTATTAGTGCCACTAAGTAGTTA
TGCATATTGCTTTCAAGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MANILFFLVSIITTTAIAYLLPAIVSRAEQEVLSQYDEVKLASQYRTAVEPLLALFLACVAPVFYAVQSDITLSVFIGLL
ALVSYIDIMRQWVPDILIHLLSWYSLSCLALGFITSDVLYSLLSLLLLLLPFLAINAYSWIKNRSYIYASGDIYILLSVG
LWLDYRFALSAAALSILSASIYAKIAGKEKVPFVPFILFSLLVFSTI

Sequences:

>Translated_207_residues
MANILFFLVSIITTTAIAYLLPAIVSRAEQEVLSQYDEVKLASQYRTAVEPLLALFLACVAPVFYAVQSDITLSVFIGLL
ALVSYIDIMRQWVPDILIHLLSWYSLSCLALGFITSDVLYSLLSLLLLLLPFLAINAYSWIKNRSYIYASGDIYILLSVG
LWLDYRFALSAAALSILSASIYAKIAGKEKVPFVPFILFSLLVFSTI
>Mature_206_residues
ANILFFLVSIITTTAIAYLLPAIVSRAEQEVLSQYDEVKLASQYRTAVEPLLALFLACVAPVFYAVQSDITLSVFIGLLA
LVSYIDIMRQWVPDILIHLLSWYSLSCLALGFITSDVLYSLLSLLLLLLPFLAINAYSWIKNRSYIYASGDIYILLSVGL
WLDYRFALSAAALSILSASIYAKIAGKEKVPFVPFILFSLLVFSTI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23025; Mature: 22893

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANILFFLVSIITTTAIAYLLPAIVSRAEQEVLSQYDEVKLASQYRTAVEPLLALFLACV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APVFYAVQSDITLSVFIGLLALVSYIDIMRQWVPDILIHLLSWYSLSCLALGFITSDVLY
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLLSLLLLLLPFLAINAYSWIKNRSYIYASGDIYILLSVGLWLDYRFALSAAALSILSAS
HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
IYAKIAGKEKVPFVPFILFSLLVFSTI
HHHHHCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ANILFFLVSIITTTAIAYLLPAIVSRAEQEVLSQYDEVKLASQYRTAVEPLLALFLACV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APVFYAVQSDITLSVFIGLLALVSYIDIMRQWVPDILIHLLSWYSLSCLALGFITSDVLY
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLLSLLLLLLPFLAINAYSWIKNRSYIYASGDIYILLSVGLWLDYRFALSAAALSILSAS
HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
IYAKIAGKEKVPFVPFILFSLLVFSTI
HHHHHCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA