| Definition | Yersinia pseudotuberculosis IP 31758 plasmid_59kb, complete sequence. |
|---|---|
| Accession | NC_009704 |
| Length | 58,679 |
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The map label for this gene is 153930609
Identifier: 153930609
GI number: 153930609
Start: 29517
End: 30002
Strand: Direct
Name: 153930609
Synonym: YpsIP31758_A0006
Alternate gene names: NA
Gene position: 29517-30002 (Clockwise)
Preceding gene: 153930583
Following gene: 153930602
Centisome position: 50.3
GC content: 27.78
Gene sequence:
>486_bases ATGAGCATAAACAATAAAGACATTGAATTATTAAAACTAATTCTAATTAATAGAGATAAAGATATAGTTAAAATGAAAAT AAATATACGAAATCATGAGAAAATCCGTGGGAATATCAAGATATCTTTAGCGGCATTTATAATAATATTTATAGGGGGTT TTATTGTTGAATTTAAAGGTTTTACGTTATTTATACTAATTGCATTAGGTGCATCCATACCTATTCATCTATATCAACTA AAAAAACACACTACATCACCAGAGGCGTTAAACATATCATCTTTAAATGATGAGATGATAGCTAACATTAGCAAATCTGG AAGTAAAGAACTTAAAGATGAACTACATAAACTTGTTGTTGCTCATGGTTATATAACATATTCAGGGATAAGTGGTATCT TAAACGAAAACAACAAGGAAGAGAACAAACAAAGACTAAGTGAACTTATTAATAATGTAGGCAGTCAAGTAATATTAAAA CCGTAA
Upstream 100 bases:
>100_bases CAGTAAATACATAAATTTATTGCGTGGCAATAGAGCGATAATTATTGCCAAGGCAAGTCGAGGCGAACGGGTATAAAGTC ATAAATAAAAGGAGTCACAG
Downstream 100 bases:
>100_bases GTTATTAATATAACAACTTAGAGCGATGTTATTATGAAAAAAATAGTTATTCTACTTTTGTCTCTAGCCATTTGTTTTTC ATCTTTACCGGCTAAAGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MSINNKDIELLKLILINRDKDIVKMKINIRNHEKIRGNIKISLAAFIIIFIGGFIVEFKGFTLFILIALGASIPIHLYQL KKHTTSPEALNISSLNDEMIANISKSGSKELKDELHKLVVAHGYITYSGISGILNENNKEENKQRLSELINNVGSQVILK P
Sequences:
>Translated_161_residues MSINNKDIELLKLILINRDKDIVKMKINIRNHEKIRGNIKISLAAFIIIFIGGFIVEFKGFTLFILIALGASIPIHLYQL KKHTTSPEALNISSLNDEMIANISKSGSKELKDELHKLVVAHGYITYSGISGILNENNKEENKQRLSELINNVGSQVILK P >Mature_160_residues SINNKDIELLKLILINRDKDIVKMKINIRNHEKIRGNIKISLAAFIIIFIGGFIVEFKGFTLFILIALGASIPIHLYQLK KHTTSPEALNISSLNDEMIANISKSGSKELKDELHKLVVAHGYITYSGISGILNENNKEENKQRLSELINNVGSQVILKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18062; Mature: 17930
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSINNKDIELLKLILINRDKDIVKMKINIRNHEKIRGNIKISLAAFIIIFIGGFIVEFKG CCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCEEECCEEHHHHHHHHHHHHHHHHHHCC FTLFILIALGASIPIHLYQLKKHTTSPEALNISSLNDEMIANISKSGSKELKDELHKLVV HHHHHHHHHCCCCCEEEEEEHHCCCCCCEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHH AHGYITYSGISGILNENNKEENKQRLSELINNVGSQVILKP HHCCEEECCHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECC >Mature Secondary Structure SINNKDIELLKLILINRDKDIVKMKINIRNHEKIRGNIKISLAAFIIIFIGGFIVEFKG CCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCEEECCEEHHHHHHHHHHHHHHHHHHCC FTLFILIALGASIPIHLYQLKKHTTSPEALNISSLNDEMIANISKSGSKELKDELHKLVV HHHHHHHHHCCCCCEEEEEEHHCCCCCCEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHH AHGYITYSGISGILNENNKEENKQRLSELINNVGSQVILKP HHCCEEECCHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA