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The map label for this gene is trbE [H]

Identifier: 153930569

GI number: 153930569

Start: 7823

End: 10360

Strand: Direct

Name: trbE [H]

Synonym: YpsIP31758_A0050

Alternate gene names: 153930569

Gene position: 7823-10360 (Clockwise)

Preceding gene: 153930599

Following gene: 153930573

Centisome position: 13.33

GC content: 39.6

Gene sequence:

>2538_bases
ATGATTGAATATATTCCTATAGCCTATGGAATATTAGGATTTTTATTGGTTCTAATCCTATTTTCCTTAATACGCGCTGC
AAATAACGAGATCAGCTTAAAAAAATTTCGGTCAAAAGATGCTGGGGTATCCGATTTACTTAACTATGCAGCTGTTGTAG
CAGATGGCGTAATCGTGGGTAAAAATGGCTCCTTTATGTCCGCATGGTTATATAAAGGTGATGATAATGCGAGTAGCACT
GACGCCCAACGGGAGCTAATTTCATTTCGTATCAATCAAGCATTTGCCAAAATGGGTTCTGGCTGGATGGTACATATAGA
TGCCGTTCGTCGCCCTGCGCCAAATTACAGTGAGACAGGAGCATCACACTTCAGAGATCCAATATCAGCGGCAGTTGATG
AAGAACGTCGTCAATACTTTGAAAGTTTAGGGACGTTATATGAAGGCTTTTTTGTCTTAACCTTAACGTGGTTCCCTCCA
TTACTGGCGCAAAGAAAAATAATAGAATTGATGTTTGATGATGATTCAGAAAAACACAGTAAAACATCACAAACTCATCA
CTTAATCGAGCAATTCCAAACAGAAACAAAAAATTTCGCAGATCGCCTTTCTTCATCAATATCCCTAGTTCAATTATGTA
GTGAAAAAGTAATCAATGAAGATGGCAGCGAAGTTACCCATGATAATCTACTGAGTTGGTTGCAATTCTGTTTAACCGGA
ATTATTCAACCTATATTATTACCAAACAATCCAATGTATATAGATGCTCTAATTGGTGGCCAAGAGCTTTATGCGGGCGT
TGTTCCGCGAATAGGCCGCAAATTTATTCAATGTGTGGCCATTGAAGGTTTCCCATTAAATTCTTATCCAGGAATATTAT
CTTCATTGGCTGAGTTATCTATTGAATATCGCTGGTCAACACGATTTATATTTTTAGATAATTTTGAAGCGGTAAGTCAT
TTAGAAAAATTCCGTAAAAAATGGAAGCAAAAAATTCATGGTTTCTTTGATCAGCTATTCAACACTGGTCGCGGAGATGT
CAATGAAGATGCTTTAAGCATGGTTGGGGATGCCTCAGCAGCCATAGCAGAAACAAATAGTGGCATGGTTAATCAAGGAT
ACTACACAAATAACATCATCTTAATGGGGGAAGATAGGGCGCTTGTAGAAGCTTCAGCACGTCGAGTTGAAAAAGAGATT
CAGCGTCTAGGGTTTGCATCCAGAACCGAAACGATAAATACAATGGACGCATTCTTTGGGTCTTTACCTGGTCATGGTGT
GGAAAATGTTAGGCGACCTCTCATGAACACCATGAACGTTGCTGATATGATTCCAACCAGCACTATTTGGACTGGTGAAA
ACTACGCCCCTAGCCCTCTATATCAGCCAAATGCTCCAGCACTCATGAGTTGTGTTACAAACGGTAGCTCTCCTTTTAGG
TTAAATCTACACGTTCGTGATTTAGGTCATGGTTTTATGTTTGGCCCAACGCGGTCAGGGAAATCAACCCATTTATCAAC
TATTGCCATGCAGTTTCTAAGATATTTTGGCTCTCGCGTTTATAGTTTTGATAAAGGGATGTCAATGTATCCCACTTGTA
AAGCTGTTGGGGGAAATCATTTCACTGTTGCTGCCAATGATGACAAATTATCTTTTGCTCCTTTATCAATATTAAAAACC
AGGAGTGATAAAGCGTGGGCAATGGAATGGATAGATACGATTCTGGCTTTAAACGGAGTTATAACAACAGCTGCTCAGCG
CAACGAAATTGCAAAAGCAATCGTCAATATGGCGGAGAGTAATTCTAAAACCATATCTGAGTTTTCATTATTAATTCAAG
ATGAAGGTATAAGGAATGCACTGAAACAATATACAGTTGATGGCTTGATGGGTCATTTACTTGATGCTGAGGAAGATGGA
TTAACCCTTGCTGACTTCATAACATTTGAAATTGAAGATTTAATGAACCTAGGCGAAAAATTTGCGCTTCCAGTTCTTCT
TTATTTATTCAGACGTATAGAAACATCTTTAGATGGTCGACCAACATTAATCATTCTTGACGAAGCATGGTTAATGTTAG
GCCATGAGGTATTCCGTGAAAAAATTCGTGAGTGGCTTAAAACCCTCGCAAAATTGAATTGCAGTGTATTAATGGCTACT
CAAAACCTTTCTGACGCAAGTAATTCTGGAATATTAGACGTTATTGTCGAATCTACCGCCACGAAAATTTATCTTCCTAA
TGTTAACGCCAGAGAAGAATCTGCGGCAGCTCTCTATACCCGAATGGGCCTTAACCCTCGCCAAATTGAGATCATCGCTT
CAGCGGTACCAAAACAAGATTACTACTTCGTAAGTGAGAAGGGTCGCAGATTATACAACCTTGCATTAGGCCCGTTAGCA
CTCGCATTCGTGGGAAGTACAGATAAAGAGTCCATTGCTGCGATCAAGGAGTTAGAAGCACGATACGGTGATGCTTGGGT
ACATGAATGGTTACGAATCAAAGGCATTAGCCTTAATGATTATGGAGTTGCAGCATGA

Upstream 100 bases:

>100_bases
ATGCGACAAATTTATATGCGCCAGCGCCTCTATAAAAAATATTATCCTGCAAGATCAACTCCGTTTCGAATCAATACAGA
AGCGCAAGGAAAGCAATACA

Downstream 100 bases:

>100_bases
TTTTCAATCTGTTCAAAAAGAAAGAAAAAACTTTAGCGGCTAAAGTTTCTCAAACCGATAACCCCTATTTGAATGCACGT
CGTACGTGGAATGGTCATGT

Product: conjugal transfer protein TrbE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 845; Mature: 845

Protein sequence:

>845_residues
MIEYIPIAYGILGFLLVLILFSLIRAANNEISLKKFRSKDAGVSDLLNYAAVVADGVIVGKNGSFMSAWLYKGDDNASST
DAQRELISFRINQAFAKMGSGWMVHIDAVRRPAPNYSETGASHFRDPISAAVDEERRQYFESLGTLYEGFFVLTLTWFPP
LLAQRKIIELMFDDDSEKHSKTSQTHHLIEQFQTETKNFADRLSSSISLVQLCSEKVINEDGSEVTHDNLLSWLQFCLTG
IIQPILLPNNPMYIDALIGGQELYAGVVPRIGRKFIQCVAIEGFPLNSYPGILSSLAELSIEYRWSTRFIFLDNFEAVSH
LEKFRKKWKQKIHGFFDQLFNTGRGDVNEDALSMVGDASAAIAETNSGMVNQGYYTNNIILMGEDRALVEASARRVEKEI
QRLGFASRTETINTMDAFFGSLPGHGVENVRRPLMNTMNVADMIPTSTIWTGENYAPSPLYQPNAPALMSCVTNGSSPFR
LNLHVRDLGHGFMFGPTRSGKSTHLSTIAMQFLRYFGSRVYSFDKGMSMYPTCKAVGGNHFTVAANDDKLSFAPLSILKT
RSDKAWAMEWIDTILALNGVITTAAQRNEIAKAIVNMAESNSKTISEFSLLIQDEGIRNALKQYTVDGLMGHLLDAEEDG
LTLADFITFEIEDLMNLGEKFALPVLLYLFRRIETSLDGRPTLIILDEAWLMLGHEVFREKIREWLKTLAKLNCSVLMAT
QNLSDASNSGILDVIVESTATKIYLPNVNAREESAAALYTRMGLNPRQIEIIASAVPKQDYYFVSEKGRRLYNLALGPLA
LAFVGSTDKESIAAIKELEARYGDAWVHEWLRIKGISLNDYGVAA

Sequences:

>Translated_845_residues
MIEYIPIAYGILGFLLVLILFSLIRAANNEISLKKFRSKDAGVSDLLNYAAVVADGVIVGKNGSFMSAWLYKGDDNASST
DAQRELISFRINQAFAKMGSGWMVHIDAVRRPAPNYSETGASHFRDPISAAVDEERRQYFESLGTLYEGFFVLTLTWFPP
LLAQRKIIELMFDDDSEKHSKTSQTHHLIEQFQTETKNFADRLSSSISLVQLCSEKVINEDGSEVTHDNLLSWLQFCLTG
IIQPILLPNNPMYIDALIGGQELYAGVVPRIGRKFIQCVAIEGFPLNSYPGILSSLAELSIEYRWSTRFIFLDNFEAVSH
LEKFRKKWKQKIHGFFDQLFNTGRGDVNEDALSMVGDASAAIAETNSGMVNQGYYTNNIILMGEDRALVEASARRVEKEI
QRLGFASRTETINTMDAFFGSLPGHGVENVRRPLMNTMNVADMIPTSTIWTGENYAPSPLYQPNAPALMSCVTNGSSPFR
LNLHVRDLGHGFMFGPTRSGKSTHLSTIAMQFLRYFGSRVYSFDKGMSMYPTCKAVGGNHFTVAANDDKLSFAPLSILKT
RSDKAWAMEWIDTILALNGVITTAAQRNEIAKAIVNMAESNSKTISEFSLLIQDEGIRNALKQYTVDGLMGHLLDAEEDG
LTLADFITFEIEDLMNLGEKFALPVLLYLFRRIETSLDGRPTLIILDEAWLMLGHEVFREKIREWLKTLAKLNCSVLMAT
QNLSDASNSGILDVIVESTATKIYLPNVNAREESAAALYTRMGLNPRQIEIIASAVPKQDYYFVSEKGRRLYNLALGPLA
LAFVGSTDKESIAAIKELEARYGDAWVHEWLRIKGISLNDYGVAA
>Mature_845_residues
MIEYIPIAYGILGFLLVLILFSLIRAANNEISLKKFRSKDAGVSDLLNYAAVVADGVIVGKNGSFMSAWLYKGDDNASST
DAQRELISFRINQAFAKMGSGWMVHIDAVRRPAPNYSETGASHFRDPISAAVDEERRQYFESLGTLYEGFFVLTLTWFPP
LLAQRKIIELMFDDDSEKHSKTSQTHHLIEQFQTETKNFADRLSSSISLVQLCSEKVINEDGSEVTHDNLLSWLQFCLTG
IIQPILLPNNPMYIDALIGGQELYAGVVPRIGRKFIQCVAIEGFPLNSYPGILSSLAELSIEYRWSTRFIFLDNFEAVSH
LEKFRKKWKQKIHGFFDQLFNTGRGDVNEDALSMVGDASAAIAETNSGMVNQGYYTNNIILMGEDRALVEASARRVEKEI
QRLGFASRTETINTMDAFFGSLPGHGVENVRRPLMNTMNVADMIPTSTIWTGENYAPSPLYQPNAPALMSCVTNGSSPFR
LNLHVRDLGHGFMFGPTRSGKSTHLSTIAMQFLRYFGSRVYSFDKGMSMYPTCKAVGGNHFTVAANDDKLSFAPLSILKT
RSDKAWAMEWIDTILALNGVITTAAQRNEIAKAIVNMAESNSKTISEFSLLIQDEGIRNALKQYTVDGLMGHLLDAEEDG
LTLADFITFEIEDLMNLGEKFALPVLLYLFRRIETSLDGRPTLIILDEAWLMLGHEVFREKIREWLKTLAKLNCSVLMAT
QNLSDASNSGILDVIVESTATKIYLPNVNAREESAAALYTRMGLNPRQIEIIASAVPKQDYYFVSEKGRRLYNLALGPLA
LAFVGSTDKESIAAIKELEARYGDAWVHEWLRIKGISLNDYGVAA

Specific function: Unknown

COG id: COG3451

COG function: function code U; Type IV secretory pathway, VirB4 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbE/virB4 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004346
- InterPro:   IPR018145 [H]

Pfam domain/function: PF03135 CagE_TrbE_VirB [H]

EC number: NA

Molecular weight: Translated: 94284; Mature: 94284

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEYIPIAYGILGFLLVLILFSLIRAANNEISLKKFRSKDAGVSDLLNYAAVVADGVIVG
CCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCEEEC
KNGSFMSAWLYKGDDNASSTDAQRELISFRINQAFAKMGSGWMVHIDAVRRPAPNYSETG
CCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC
ASHFRDPISAAVDEERRQYFESLGTLYEGFFVLTLTWFPPLLAQRKIIELMFDDDSEKHS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
KTSQTHHLIEQFQTETKNFADRLSSSISLVQLCSEKVINEDGSEVTHDNLLSWLQFCLTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
IIQPILLPNNPMYIDALIGGQELYAGVVPRIGRKFIQCVAIEGFPLNSYPGILSSLAELS
HHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHCE
IEYRWSTRFIFLDNFEAVSHLEKFRKKWKQKIHGFFDQLFNTGRGDVNEDALSMVGDASA
EEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHH
AIAETNSGMVNQGYYTNNIILMGEDRALVEASARRVEKEIQRLGFASRTETINTMDAFFG
HHEECCCCCEECCEEECEEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
SLPGHGVENVRRPLMNTMNVADMIPTSTIWTGENYAPSPLYQPNAPALMSCVTNGSSPFR
CCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCEE
LNLHVRDLGHGFMFGPTRSGKSTHLSTIAMQFLRYFGSRVYSFDKGMSMYPTCKAVGGNH
EEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCE
FTVAANDDKLSFAPLSILKTRSDKAWAMEWIDTILALNGVITTAAQRNEIAKAIVNMAES
EEEEECCCCCEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NSKTISEFSLLIQDEGIRNALKQYTVDGLMGHLLDAEEDGLTLADFITFEIEDLMNLGEK
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHCCHHH
FALPVLLYLFRRIETSLDGRPTLIILDEAWLMLGHEVFREKIREWLKTLAKLNCSVLMAT
HHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
QNLSDASNSGILDVIVESTATKIYLPNVNAREESAAALYTRMGLNPRQIEIIASAVPKQD
CCCCCCCCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHCCCCCHHEEHHHHHCCCCC
YYFVSEKGRRLYNLALGPLALAFVGSTDKESIAAIKELEARYGDAWVHEWLRIKGISLND
EEEEECCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC
YGVAA
CCCCC
>Mature Secondary Structure
MIEYIPIAYGILGFLLVLILFSLIRAANNEISLKKFRSKDAGVSDLLNYAAVVADGVIVG
CCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCEEEC
KNGSFMSAWLYKGDDNASSTDAQRELISFRINQAFAKMGSGWMVHIDAVRRPAPNYSETG
CCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCC
ASHFRDPISAAVDEERRQYFESLGTLYEGFFVLTLTWFPPLLAQRKIIELMFDDDSEKHS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
KTSQTHHLIEQFQTETKNFADRLSSSISLVQLCSEKVINEDGSEVTHDNLLSWLQFCLTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
IIQPILLPNNPMYIDALIGGQELYAGVVPRIGRKFIQCVAIEGFPLNSYPGILSSLAELS
HHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHCE
IEYRWSTRFIFLDNFEAVSHLEKFRKKWKQKIHGFFDQLFNTGRGDVNEDALSMVGDASA
EEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHH
AIAETNSGMVNQGYYTNNIILMGEDRALVEASARRVEKEIQRLGFASRTETINTMDAFFG
HHEECCCCCEECCEEECEEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC
SLPGHGVENVRRPLMNTMNVADMIPTSTIWTGENYAPSPLYQPNAPALMSCVTNGSSPFR
CCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCEE
LNLHVRDLGHGFMFGPTRSGKSTHLSTIAMQFLRYFGSRVYSFDKGMSMYPTCKAVGGNH
EEEEEEECCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCE
FTVAANDDKLSFAPLSILKTRSDKAWAMEWIDTILALNGVITTAAQRNEIAKAIVNMAES
EEEEECCCCCEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NSKTISEFSLLIQDEGIRNALKQYTVDGLMGHLLDAEEDGLTLADFITFEIEDLMNLGEK
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHCCHHH
FALPVLLYLFRRIETSLDGRPTLIILDEAWLMLGHEVFREKIREWLKTLAKLNCSVLMAT
HHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE
QNLSDASNSGILDVIVESTATKIYLPNVNAREESAAALYTRMGLNPRQIEIIASAVPKQD
CCCCCCCCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHHHCCCCCHHEEHHHHHCCCCC
YYFVSEKGRRLYNLALGPLALAFVGSTDKESIAAIKELEARYGDAWVHEWLRIKGISLND
EEEEECCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC
YGVAA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]