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The map label for this gene is nuoB [H]

Identifier: 152977486

GI number: 152977486

Start: 3878787

End: 3879305

Strand: Reverse

Name: nuoB [H]

Synonym: Bcer98_3818

Alternate gene names: 152977486

Gene position: 3879305-3878787 (Counterclockwise)

Preceding gene: 152977487

Following gene: 152977485

Centisome position: 94.92

GC content: 41.62

Gene sequence:

>519_bases
ATGGCTATAAATTTCGAAGAACTACATCCACAGGAGCAAGCGGAATTAGAAAGGAATATCTTTTTTACAACATTAGAGCA
GATAAAAGGATGGGCACGTAGCAATTCTTTATGGCCGATGACATTTGGACTGGCATGCTGCGCGATTGAGATGATGGGAG
TAGGTTCCTCACATTACGATTTAGATCGATTTGGCTCTTTTTTCAGGACATCTCCAAGGCAGTCAGATGTCATGATTGTT
TCAGGAACGGTGACAAAGAAAATGGCTCCGATTGTGCGGCGTTTATATGATCAGATGCCGGAACCGAAATGGGTTATTGC
GATGGGATCTTGTGCAACTGCTGGTGGTCCTTACGTAAATTCGTATGCTGTTGTAAAAGGCGTCGATCAAATTGTACCTG
TAGATGTATATATTCCAGGGTGTCCCCCTAACCCAGCTGCCTTAATTTATGGAATTAATAAATTAAAAGAGAAAATTCGT
TACGAAGCAAAGACAGGAAAGCAGGTGACGAATAAATGA

Upstream 100 bases:

>100_bases
CATATGACAAGCTTGGGTTGTTTGCATTAATTGAAATGCTCATTTTTGTCGCTATGTTATTGATAGGATTAGCCTATGCT
TGGAAAAAGAAGGTGTTACA

Downstream 100 bases:

>100_bases
GTGATCCGAATAAAGAGTTAGAGGATATGAAACGAGAAGCGGCTAGGCGTGCAAAGGAAGAGGCACGAAAGCGTCTTGCC
GCTAAGCATGAAGCAGAAAT

Product: NADH dehydrogenase subunit B

Products: NA

Alternate protein names: NADH dehydrogenase I subunit B; NDH-1 subunit B [H]

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MAINFEELHPQEQAELERNIFFTTLEQIKGWARSNSLWPMTFGLACCAIEMMGVGSSHYDLDRFGSFFRTSPRQSDVMIV
SGTVTKKMAPIVRRLYDQMPEPKWVIAMGSCATAGGPYVNSYAVVKGVDQIVPVDVYIPGCPPNPAALIYGINKLKEKIR
YEAKTGKQVTNK

Sequences:

>Translated_172_residues
MAINFEELHPQEQAELERNIFFTTLEQIKGWARSNSLWPMTFGLACCAIEMMGVGSSHYDLDRFGSFFRTSPRQSDVMIV
SGTVTKKMAPIVRRLYDQMPEPKWVIAMGSCATAGGPYVNSYAVVKGVDQIVPVDVYIPGCPPNPAALIYGINKLKEKIR
YEAKTGKQVTNK
>Mature_171_residues
AINFEELHPQEQAELERNIFFTTLEQIKGWARSNSLWPMTFGLACCAIEMMGVGSSHYDLDRFGSFFRTSPRQSDVMIVS
GTVTKKMAPIVRRLYDQMPEPKWVIAMGSCATAGGPYVNSYAVVKGVDQIVPVDVYIPGCPPNPAALIYGINKLKEKIRY
EAKTGKQVTNK

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translo

COG id: COG0377

COG function: function code C; NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I 20 kDa subunit family [H]

Homologues:

Organism=Homo sapiens, GI187281616, Length=140, Percent_Identity=63.5714285714286, Blast_Score=204, Evalue=4e-53,
Organism=Escherichia coli, GI1788624, Length=157, Percent_Identity=50.9554140127389, Blast_Score=173, Evalue=7e-45,
Organism=Escherichia coli, GI1789074, Length=121, Percent_Identity=42.1487603305785, Blast_Score=103, Evalue=9e-24,
Organism=Escherichia coli, GI1788834, Length=131, Percent_Identity=38.1679389312977, Blast_Score=97, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17509685, Length=153, Percent_Identity=52.9411764705882, Blast_Score=190, Evalue=3e-49,
Organism=Drosophila melanogaster, GI18859983, Length=139, Percent_Identity=57.5539568345324, Blast_Score=197, Evalue=2e-51,
Organism=Drosophila melanogaster, GI24642371, Length=139, Percent_Identity=57.5539568345324, Blast_Score=197, Evalue=2e-51,
Organism=Drosophila melanogaster, GI24651058, Length=136, Percent_Identity=61.0294117647059, Blast_Score=196, Evalue=5e-51,

Paralogues:

None

Copy number: 520 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006137
- InterPro:   IPR006138
- InterPro:   IPR014406 [H]

Pfam domain/function: PF01058 Oxidored_q6 [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 19198; Mature: 19067

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAINFEELHPQEQAELERNIFFTTLEQIKGWARSNSLWPMTFGLACCAIEMMGVGSSHYD
CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCC
LDRFGSFFRTSPRQSDVMIVSGTVTKKMAPIVRRLYDQMPEPKWVIAMGSCATAGGPYVN
HHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC
SYAVVKGVDQIVPVDVYIPGCPPNPAALIYGINKLKEKIRYEAKTGKQVTNK
CHHHHHCCCCEEEEEEEECCCCCCCHHEEHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AINFEELHPQEQAELERNIFFTTLEQIKGWARSNSLWPMTFGLACCAIEMMGVGSSHYD
CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCC
LDRFGSFFRTSPRQSDVMIVSGTVTKKMAPIVRRLYDQMPEPKWVIAMGSCATAGGPYVN
HHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC
SYAVVKGVDQIVPVDVYIPGCPPNPAALIYGINKLKEKIRYEAKTGKQVTNK
CHHHHHCCCCEEEEEEEECCCCCCCHHEEHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA