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The map label for this gene is nuoC [H]

Identifier: 152977485

GI number: 152977485

Start: 3877915

End: 3878790

Strand: Reverse

Name: nuoC [H]

Synonym: Bcer98_3817

Alternate gene names: 152977485

Gene position: 3878790-3877915 (Counterclockwise)

Preceding gene: 152977486

Following gene: 152977484

Centisome position: 94.9

GC content: 46.0

Gene sequence:

>876_bases
ATGAGTGATCCGAATAAAGAGTTAGAGGATATGAAACGAGAAGCGGCTAGGCGTGCAAAGGAAGAGGCACGAAAGCGTCT
TGCCGCTAAGCATGAAGCAGAAATATCGAAAATAGAGGCGCGAGAACAAGAAAAAGAGAAAGCGCTATCAAAGGGTGCTG
AAGTAAGCAGAGATGAAGTAACGGAAGCGGAGAAAAAAGCAGCAGCAGCGAAAGCGAAGGCTGCAGCGTTAGCGAAGCGA
AAGATGAAGGAAGAGAGCGCGGCACATGGTGATGAAAAAGCGAAAGCAATCGCTGCCGCAAAAGCAATCGCTGCCGCGAA
GGCAAAAGCAGCGGCTGCTGCGCGAGCAAAGAGTGCTGCTAGTAAAAAGGAAGAAGAGAAAGTGCCAGAAAAGCCGTCGC
CGAATCAGCCATATGTAGAGGCATATGCGAAACTTATTAAGGAAAAAATAGGGGAGCATGCATTGGTAGATTTCTATATC
AATAGATTGTCTAAAGATGTTCCGACGCTTGTTGTTTGCAAGGAGCATTATTATGAAGTAATGGAGTTGTTACGGAGTCA
TGAGCGCCTTGCTTTTCATTATATGTCAGAGCTGCATGCAACGGATTTTGTGACGCATATGGAAGTGTATGTACACCTAT
ATTCATATAGAAAGAAACAATCAGTGGCGGTGAAGGTGAAATTAGAAAGGGAGGCGCCGCAAGTAGCCTCGATTACACCG
CTTTGGGAAGGGGCAAATTGGCCCGAGCGCGAAGCTTATGATTTACTTGGAGTGATTTTTACTGGCCATCCTAATTTAAC
GCGCATTTTAATGCCAGATGACTGGGTAGGGCATCCGCTTCGAAAAGACTATGAACCTTTTGATGTGGAGGTGTAG

Upstream 100 bases:

>100_bases
CAGGGTGTCCCCCTAACCCAGCTGCCTTAATTTATGGAATTAATAAATTAAAAGAGAAAATTCGTTACGAAGCAAAGACA
GGAAAGCAGGTGACGAATAA

Downstream 100 bases:

>100_bases
CGCAGATGATCCGTACAGAAGAAATGTTGCTAAATGTGGGGCCGCAGCACCCGAGTACTCATGGAGTATTCCGGCTTATT
ATTAAAATTGATGGAGAAAC

Product: NADH dehydrogenase subunit C

Products: NA

Alternate protein names: NADH dehydrogenase I subunit C; NDH-1 subunit C [H]

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MSDPNKELEDMKREAARRAKEEARKRLAAKHEAEISKIEAREQEKEKALSKGAEVSRDEVTEAEKKAAAAKAKAAALAKR
KMKEESAAHGDEKAKAIAAAKAIAAAKAKAAAAARAKSAASKKEEEKVPEKPSPNQPYVEAYAKLIKEKIGEHALVDFYI
NRLSKDVPTLVVCKEHYYEVMELLRSHERLAFHYMSELHATDFVTHMEVYVHLYSYRKKQSVAVKVKLEREAPQVASITP
LWEGANWPEREAYDLLGVIFTGHPNLTRILMPDDWVGHPLRKDYEPFDVEV

Sequences:

>Translated_291_residues
MSDPNKELEDMKREAARRAKEEARKRLAAKHEAEISKIEAREQEKEKALSKGAEVSRDEVTEAEKKAAAAKAKAAALAKR
KMKEESAAHGDEKAKAIAAAKAIAAAKAKAAAAARAKSAASKKEEEKVPEKPSPNQPYVEAYAKLIKEKIGEHALVDFYI
NRLSKDVPTLVVCKEHYYEVMELLRSHERLAFHYMSELHATDFVTHMEVYVHLYSYRKKQSVAVKVKLEREAPQVASITP
LWEGANWPEREAYDLLGVIFTGHPNLTRILMPDDWVGHPLRKDYEPFDVEV
>Mature_290_residues
SDPNKELEDMKREAARRAKEEARKRLAAKHEAEISKIEAREQEKEKALSKGAEVSRDEVTEAEKKAAAAKAKAAALAKRK
MKEESAAHGDEKAKAIAAAKAIAAAKAKAAAAARAKSAASKKEEEKVPEKPSPNQPYVEAYAKLIKEKIGEHALVDFYIN
RLSKDVPTLVVCKEHYYEVMELLRSHERLAFHYMSELHATDFVTHMEVYVHLYSYRKKQSVAVKVKLEREAPQVASITPL
WEGANWPEREAYDLLGVIFTGHPNLTRILMPDDWVGHPLRKDYEPFDVEV

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translo

COG id: COG0852

COG function: function code C; NADH:ubiquinone oxidoreductase 27 kD subunit

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I 30 kDa subunit family [H]

Homologues:

Organism=Homo sapiens, GI4758788, Length=108, Percent_Identity=36.1111111111111, Blast_Score=73, Evalue=3e-13,
Organism=Escherichia coli, GI145693162, Length=149, Percent_Identity=35.5704697986577, Blast_Score=95, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI71990788, Length=244, Percent_Identity=27.4590163934426, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI32563621, Length=108, Percent_Identity=38.8888888888889, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24656494, Length=183, Percent_Identity=27.3224043715847, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010218
- InterPro:   IPR001268
- InterPro:   IPR020396
- ProDom:   PD001581 [H]

Pfam domain/function: PF00329 Complex1_30kDa [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 32798; Mature: 32667

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDPNKELEDMKREAARRAKEEARKRLAAKHEAEISKIEAREQEKEKALSKGAEVSRDEV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
TEAEKKAAAAKAKAAALAKRKMKEESAAHGDEKAKAIAAAKAIAAAKAKAAAAARAKSAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKKEEEKVPEKPSPNQPYVEAYAKLIKEKIGEHALVDFYINRLSKDVPTLVVCKEHYYEV
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEHHHHHHHHH
MELLRSHERLAFHYMSELHATDFVTHMEVYVHLYSYRKKQSVAVKVKLEREAPQVASITP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCC
LWEGANWPEREAYDLLGVIFTGHPNLTRILMPDDWVGHPLRKDYEPFDVEV
CCCCCCCCCHHHHHHHHHHEECCCCCEEEECCCCCCCCCHHCCCCCCCCCC
>Mature Secondary Structure 
SDPNKELEDMKREAARRAKEEARKRLAAKHEAEISKIEAREQEKEKALSKGAEVSRDEV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
TEAEKKAAAAKAKAAALAKRKMKEESAAHGDEKAKAIAAAKAIAAAKAKAAAAARAKSAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKKEEEKVPEKPSPNQPYVEAYAKLIKEKIGEHALVDFYINRLSKDVPTLVVCKEHYYEV
HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEHHHHHHHHH
MELLRSHERLAFHYMSELHATDFVTHMEVYVHLYSYRKKQSVAVKVKLEREAPQVASITP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCC
LWEGANWPEREAYDLLGVIFTGHPNLTRILMPDDWVGHPLRKDYEPFDVEV
CCCCCCCCCHHHHHHHHHHEECCCCCEEEECCCCCCCCCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA