| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is resE [H]
Identifier: 150401859
GI number: 150401859
Start: 1492291
End: 1494213
Strand: Direct
Name: resE [H]
Synonym: Maeo_1437
Alternate gene names: 150401859
Gene position: 1492291-1494213 (Clockwise)
Preceding gene: 150401858
Following gene: 150401861
Centisome position: 95.08
GC content: 31.83
Gene sequence:
>1923_bases ATGGGGGAAATACCCAAAATAAGAAAATTTGGAACTAAATTAACGATTTATTCTATTATTGTCGCACTTATCCCCGTGGT TATTCTTGGAGTGGTGTCCTCACATACTATTACACAAACCATGAATGAGCAGGCACAAGACAAAATAAACACCGACTTAT ATGCTGCGGAAGAGTTTATGGGGCACAACCTTGATAAATTGTCTTCTATATGTGAATATACCGTCAATTCTCCCGATTTA CTGGAGAACATGAAAAATAAGAATATTAAAAATTTAAAAAATATACTATTATTGACAAAAAAATCTAGTGATGCTGATTT TGTTACTTTATTTGATAATACTGGAAATGTAGTATTGAGGTCAAATAACAATAACTATGGAGATAAAGAACTTTCAGACC ATATAAAAAAGGTTTTAAATGGGAGTAATGTCACAGCCACCATAATATTGGATGAAAATACTGTTAAAAAAGAGAATCTT GAAAATAAAACAATTATTTATATATTTGATAAGGGTGATTTTGTACCTCTTGATATGGAGAATAAATCCATTGAATATAG GGGTCTTGCACTGGTATCGATAAAACCAATATATGATAACAATACTGGCGAAATAATGGGGGCCCTGATGATATCAAAAG TGCTCAATAAAGATACATATATTGTAGATAAAATTAAAGCAACTACAAAGGACACCTCCACCATATTTTTAGGAGGGCTT AGAATATCTACAAATGTTCAAGAAAATCACGAACGGGCAATAGGGACCTTTGTATCGCAGAATGTATATGAACAAGTAAT AAAAAAAGGAGAAATATACTATGGGCGTGCATTTGTTGTTGATGATTGGTATTTAACAGCATACAAACCAATTAAAGATG ATAACAATAATATTATCGGAATGATATATGTTGGAGTTCCAGAAAAGCCCTTTATCGCACTCCAAGATAAAATAAAACAC ATAATTTTATGGGTTGGTTTAGTAGCCTTTTTAATGGCCTTGGTGGTTTCGGTAATTATTAACAGCACCATTACAAGACC AATAAAGAAGCTGAAAAAAGGAGTAGAAATGATGGGAAAGGGGGACTATAATTTCAGAGTTAATATTAATAGCAATGATG AATTTGAAGAACTTGCACATGCATTCAACAAAATGGCCGATGAAATTAAAAGCTCACAAGAAAAATTAAAAAAACAAGCC GAAAAGCTGGAAATATCATACAATGAACTGAAAAAACTGGATAAATTCAAATCCGAAATAATATCCATAGTTTCGCATGA GTTAAGAACGCCACTGACCTCAATAAAAGGGTATGTAGAGCTTGTATTAGATGGCACAATGGGCACCATAAACGAATCTC AAAAAAGATGTCTTGAAATTGCCAATGAAAATATTGACCGGTTAAAAAGGTTGATAGATAATATGCTTGATTTATCAAAA ATAGAGCGTGGAGAGCTAAAAATGGACATATCCAAGGTGAATTTAAATGATATCGTTCAAAATGTGGTTCATTCATTAAA GCCATTGGCTGATGGAAAGAATATAAAAATAATAAATAAAGTAGAGCCCATAACTGCAAATTTGGATAAAGATAAAATAA CAGGTGTGCTAACTAATTTAATAGAGAATGCCATAAAATTCTCCCCCGTAAACGAAAATGTAACTATTGAGGCATTTAAA GAAAATAATATGGTACATATAACTGTAAAAGATAACGGTCCAGGTATACCAAAATCTGAATTAACTAAAATATTTGATAT ATTCTATCAAGTTAATTCTTCTGCAAAAAGAATAAAAAGTGGTTCGGGTCTTGGTTTAGCGATATGTAAAAGTATCGTGG AATCCCATGGTGGAAAAATATGGGTAGAAAGTAAGTTTGGAAAAGAAAGTACATTCCATATATTGCTCCCATTGGATAAA TAA
Upstream 100 bases:
>100_bases AGTAAATGAGTTAATATTAAAAATGCAAAAGGGCAATAAATAGGATAAATAAATAGGATATTTAGGTAGATTACTAAATT AATAATATATAGGTGTAAAT
Downstream 100 bases:
>100_bases TGCTGGTTAAGAATTTTATCTTAATGCCGATGGCGAATATAGTTAATCTTAAAAACTATCTCTTTATTGTCCAAAATAAT TAAATAAAATCTCTTCGAGA
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 640; Mature: 639
Protein sequence:
>640_residues MGEIPKIRKFGTKLTIYSIIVALIPVVILGVVSSHTITQTMNEQAQDKINTDLYAAEEFMGHNLDKLSSICEYTVNSPDL LENMKNKNIKNLKNILLLTKKSSDADFVTLFDNTGNVVLRSNNNNYGDKELSDHIKKVLNGSNVTATIILDENTVKKENL ENKTIIYIFDKGDFVPLDMENKSIEYRGLALVSIKPIYDNNTGEIMGALMISKVLNKDTYIVDKIKATTKDTSTIFLGGL RISTNVQENHERAIGTFVSQNVYEQVIKKGEIYYGRAFVVDDWYLTAYKPIKDDNNNIIGMIYVGVPEKPFIALQDKIKH IILWVGLVAFLMALVVSVIINSTITRPIKKLKKGVEMMGKGDYNFRVNINSNDEFEELAHAFNKMADEIKSSQEKLKKQA EKLEISYNELKKLDKFKSEIISIVSHELRTPLTSIKGYVELVLDGTMGTINESQKRCLEIANENIDRLKRLIDNMLDLSK IERGELKMDISKVNLNDIVQNVVHSLKPLADGKNIKIINKVEPITANLDKDKITGVLTNLIENAIKFSPVNENVTIEAFK ENNMVHITVKDNGPGIPKSELTKIFDIFYQVNSSAKRIKSGSGLGLAICKSIVESHGGKIWVESKFGKESTFHILLPLDK
Sequences:
>Translated_640_residues MGEIPKIRKFGTKLTIYSIIVALIPVVILGVVSSHTITQTMNEQAQDKINTDLYAAEEFMGHNLDKLSSICEYTVNSPDL LENMKNKNIKNLKNILLLTKKSSDADFVTLFDNTGNVVLRSNNNNYGDKELSDHIKKVLNGSNVTATIILDENTVKKENL ENKTIIYIFDKGDFVPLDMENKSIEYRGLALVSIKPIYDNNTGEIMGALMISKVLNKDTYIVDKIKATTKDTSTIFLGGL RISTNVQENHERAIGTFVSQNVYEQVIKKGEIYYGRAFVVDDWYLTAYKPIKDDNNNIIGMIYVGVPEKPFIALQDKIKH IILWVGLVAFLMALVVSVIINSTITRPIKKLKKGVEMMGKGDYNFRVNINSNDEFEELAHAFNKMADEIKSSQEKLKKQA EKLEISYNELKKLDKFKSEIISIVSHELRTPLTSIKGYVELVLDGTMGTINESQKRCLEIANENIDRLKRLIDNMLDLSK IERGELKMDISKVNLNDIVQNVVHSLKPLADGKNIKIINKVEPITANLDKDKITGVLTNLIENAIKFSPVNENVTIEAFK ENNMVHITVKDNGPGIPKSELTKIFDIFYQVNSSAKRIKSGSGLGLAICKSIVESHGGKIWVESKFGKESTFHILLPLDK >Mature_639_residues GEIPKIRKFGTKLTIYSIIVALIPVVILGVVSSHTITQTMNEQAQDKINTDLYAAEEFMGHNLDKLSSICEYTVNSPDLL ENMKNKNIKNLKNILLLTKKSSDADFVTLFDNTGNVVLRSNNNNYGDKELSDHIKKVLNGSNVTATIILDENTVKKENLE NKTIIYIFDKGDFVPLDMENKSIEYRGLALVSIKPIYDNNTGEIMGALMISKVLNKDTYIVDKIKATTKDTSTIFLGGLR ISTNVQENHERAIGTFVSQNVYEQVIKKGEIYYGRAFVVDDWYLTAYKPIKDDNNNIIGMIYVGVPEKPFIALQDKIKHI ILWVGLVAFLMALVVSVIINSTITRPIKKLKKGVEMMGKGDYNFRVNINSNDEFEELAHAFNKMADEIKSSQEKLKKQAE KLEISYNELKKLDKFKSEIISIVSHELRTPLTSIKGYVELVLDGTMGTINESQKRCLEIANENIDRLKRLIDNMLDLSKI ERGELKMDISKVNLNDIVQNVVHSLKPLADGKNIKIINKVEPITANLDKDKITGVLTNLIENAIKFSPVNENVTIEAFKE NNMVHITVKDNGPGIPKSELTKIFDIFYQVNSSAKRIKSGSGLGLAICKSIVESHGGKIWVESKFGKESTFHILLPLDK
Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1788393, Length=296, Percent_Identity=28.3783783783784, Blast_Score=140, Evalue=2e-34, Organism=Escherichia coli, GI145693157, Length=244, Percent_Identity=30.7377049180328, Blast_Score=123, Evalue=4e-29, Organism=Escherichia coli, GI1789149, Length=404, Percent_Identity=25.990099009901, Blast_Score=123, Evalue=4e-29, Organism=Escherichia coli, GI1788713, Length=244, Percent_Identity=32.7868852459016, Blast_Score=119, Evalue=5e-28, Organism=Escherichia coli, GI1786912, Length=263, Percent_Identity=28.8973384030418, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1786600, Length=230, Percent_Identity=28.695652173913, Blast_Score=117, Evalue=3e-27, Organism=Escherichia coli, GI48994928, Length=231, Percent_Identity=30.3030303030303, Blast_Score=117, Evalue=3e-27, Organism=Escherichia coli, GI87082128, Length=320, Percent_Identity=26.25, Blast_Score=114, Evalue=2e-26, Organism=Escherichia coli, GI1786783, Length=328, Percent_Identity=24.6951219512195, Blast_Score=112, Evalue=1e-25, Organism=Escherichia coli, GI1787894, Length=322, Percent_Identity=26.0869565217391, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1788279, Length=328, Percent_Identity=30.4878048780488, Blast_Score=105, Evalue=8e-24, Organism=Escherichia coli, GI87081816, Length=342, Percent_Identity=24.5614035087719, Blast_Score=103, Evalue=5e-23, Organism=Escherichia coli, GI1790436, Length=241, Percent_Identity=31.9502074688797, Blast_Score=101, Evalue=2e-22, Organism=Escherichia coli, GI1788549, Length=255, Percent_Identity=28.2352941176471, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1790861, Length=335, Percent_Identity=22.3880597014925, Blast_Score=86, Evalue=1e-17, Organism=Escherichia coli, GI1790346, Length=303, Percent_Identity=22.1122112211221, Blast_Score=83, Evalue=4e-17, Organism=Escherichia coli, GI1789403, Length=203, Percent_Identity=30.0492610837438, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1789808, Length=277, Percent_Identity=24.9097472924188, Blast_Score=79, Evalue=9e-16, Organism=Escherichia coli, GI1790551, Length=303, Percent_Identity=22.4422442244224, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1790300, Length=251, Percent_Identity=25.8964143426295, Blast_Score=72, Evalue=2e-13, Organism=Escherichia coli, GI1787374, Length=281, Percent_Identity=25.6227758007117, Blast_Score=71, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 71939; Mature: 71808
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEIPKIRKFGTKLTIYSIIVALIPVVILGVVSSHTITQTMNEQAQDKINTDLYAAEEFM CCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHH GHNLDKLSSICEYTVNSPDLLENMKNKNIKNLKNILLLTKKSSDADFVTLFDNTGNVVLR CCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHEEEEEECCCCCCEEEEEECCCCEEEE SNNNNYGDKELSDHIKKVLNGSNVTATIILDENTVKKENLENKTIIYIFDKGDFVPLDME CCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEECCC NKSIEYRGLALVSIKPIYDNNTGEIMGALMISKVLNKDTYIVDKIKATTKDTSTIFLGGL CCCEEECCEEEEEEEEEEECCHHHHHHHHHHHHHHCCCCEEEEHHHCCCCCCCEEEEEEE RISTNVQENHERAIGTFVSQNVYEQVIKKGEIYYGRAFVVDDWYLTAYKPIKDDNNNIIG EEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECEEEEEECCCCCCCCCEEE MIYVGVPEKPFIALQDKIKHIILWVGLVAFLMALVVSVIINSTITRPIKKLKKGVEMMGK EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GDYNFRVNINSNDEFEELAHAFNKMADEIKSSQEKLKKQAEKLEISYNELKKLDKFKSEI CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH ISIVSHELRTPLTSIKGYVELVLDGTMGTINESQKRCLEIANENIDRLKRLIDNMLDLSK HHHHHHHHHCCHHHHHHEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH IERGELKMDISKVNLNDIVQNVVHSLKPLADGKNIKIINKVEPITANLDKDKITGVLTNL CCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHH IENAIKFSPVNENVTIEAFKENNMVHITVKDNGPGIPKSELTKIFDIFYQVNSSAKRIKS HHHHHEECCCCCCEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHCC GSGLGLAICKSIVESHGGKIWVESKFGKESTFHILLPLDK CCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCC >Mature Secondary Structure GEIPKIRKFGTKLTIYSIIVALIPVVILGVVSSHTITQTMNEQAQDKINTDLYAAEEFM CCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHH GHNLDKLSSICEYTVNSPDLLENMKNKNIKNLKNILLLTKKSSDADFVTLFDNTGNVVLR CCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHEEEEEECCCCCCEEEEEECCCCEEEE SNNNNYGDKELSDHIKKVLNGSNVTATIILDENTVKKENLENKTIIYIFDKGDFVPLDME CCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEECCC NKSIEYRGLALVSIKPIYDNNTGEIMGALMISKVLNKDTYIVDKIKATTKDTSTIFLGGL CCCEEECCEEEEEEEEEEECCHHHHHHHHHHHHHHCCCCEEEEHHHCCCCCCCEEEEEEE RISTNVQENHERAIGTFVSQNVYEQVIKKGEIYYGRAFVVDDWYLTAYKPIKDDNNNIIG EEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECEEEEEECCCCCCCCCEEE MIYVGVPEKPFIALQDKIKHIILWVGLVAFLMALVVSVIINSTITRPIKKLKKGVEMMGK EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GDYNFRVNINSNDEFEELAHAFNKMADEIKSSQEKLKKQAEKLEISYNELKKLDKFKSEI CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH ISIVSHELRTPLTSIKGYVELVLDGTMGTINESQKRCLEIANENIDRLKRLIDNMLDLSK HHHHHHHHHCCHHHHHHEEEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH IERGELKMDISKVNLNDIVQNVVHSLKPLADGKNIKIINKVEPITANLDKDKITGVLTNL CCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHH IENAIKFSPVNENVTIEAFKENNMVHITVKDNGPGIPKSELTKIFDIFYQVNSSAKRIKS HHHHHEECCCCCCEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHCC GSGLGLAICKSIVESHGGKIWVESKFGKESTFHILLPLDK CCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]