Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

Click here to switch to the map view.

The map label for this gene is 150401464

Identifier: 150401464

GI number: 150401464

Start: 1070151

End: 1070990

Strand: Direct

Name: 150401464

Synonym: Maeo_1040

Alternate gene names: NA

Gene position: 1070151-1070990 (Clockwise)

Preceding gene: 150401462

Following gene: 150401473

Centisome position: 68.18

GC content: 27.26

Gene sequence:

>840_bases
ATGAATTTAAAAATAAAATATTATTTAGAATTAATAAGGGTAAAAAACTGTTTAACTGCTTCATTTGGAACTATCATTGG
TGGGCTAATAGCTTCAAATTTTAATTTTGGATTAATTGGTTATATATTACTTGCCTCTTTAATTGTATTTTTGGTTTGTG
GCTTTGGAAATGCCTTAAATGATATACAAGACATTGAAATTGATAAAATAAACAAGCCAAACCGACCATTACCATCAAAT
AAAATATCATTAAAAAGTGCAACAATATTTTCTTATTTATTAATGATATCTGGGATTATAATATCATTATTTAATATGAT
TTGTTTTGCAATTGCTTTAATTAATTCCATTGTATTATATTTGTATGCTAAAAAATACAAACGAAACAAAATAATAGGAA
ATTTAATTGTAGCATACCTAACTGGCTCTATTTTTATATTTGGTGGTGCATCGGTTGGAAATGTGGAAATTACACTAATA
TTGTTTCTTTGTGCTTTATTTGCTACATGGAGTAGGGAAATTATAAAAGATTACGAAGACTTAGACGGAGATAAATCCGA
AGGAGTTATTTCACTTCCTATAAAATATGGCAAAAACTCTATTTTCGTAGCGATTGGGTTTTTACTTTGTTCTATACTGC
TAAGTCCATTGCCTTATATATTGGGTATGTTCGGAGCTCCCTATTTAATGGCCATAATGATATGCAATGTTTTATTTATA
TTGGCAGTTTTAAAATTATTAAAAAATCCCTCAAAAGAAATTGCAGGGAGCTCCTCAAAATATATTAAAATAATAATGAA
TTTAGTGCTTTTAAGTTTCGTAATTGGTTCATTGATGTAA

Upstream 100 bases:

>100_bases
TCCTTTTAAATATGATTTACAATAAATTATAATAAATACTATATGTGTATTATTTATGATATTATCAATATTGGCATAAT
ATATGGTGTGTGGTGCAATT

Downstream 100 bases:

>100_bases
AAAAGAATAAAAAATTTTATAATAAATATATAATATTAATTAAATCTTTTTAATATTGCTTTTTCTATCTGCTAACTCCA
TTCTTTTAGCATCATTCCAA

Product: (S)-2,3-di-O-geranylgeranylglyceryl phosphate synthase

Products: NA

Alternate protein names: DGGGP synthase; DGGGPS; (S)-2,3-di-O-geranylgeranylglyceryl phosphate synthase; Geranylgeranylglycerol-phosphate geranylgeranyltransferase

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MNLKIKYYLELIRVKNCLTASFGTIIGGLIASNFNFGLIGYILLASLIVFLVCGFGNALNDIQDIEIDKINKPNRPLPSN
KISLKSATIFSYLLMISGIIISLFNMICFAIALINSIVLYLYAKKYKRNKIIGNLIVAYLTGSIFIFGGASVGNVEITLI
LFLCALFATWSREIIKDYEDLDGDKSEGVISLPIKYGKNSIFVAIGFLLCSILLSPLPYILGMFGAPYLMAIMICNVLFI
LAVLKLLKNPSKEIAGSSSKYIKIIMNLVLLSFVIGSLM

Sequences:

>Translated_279_residues
MNLKIKYYLELIRVKNCLTASFGTIIGGLIASNFNFGLIGYILLASLIVFLVCGFGNALNDIQDIEIDKINKPNRPLPSN
KISLKSATIFSYLLMISGIIISLFNMICFAIALINSIVLYLYAKKYKRNKIIGNLIVAYLTGSIFIFGGASVGNVEITLI
LFLCALFATWSREIIKDYEDLDGDKSEGVISLPIKYGKNSIFVAIGFLLCSILLSPLPYILGMFGAPYLMAIMICNVLFI
LAVLKLLKNPSKEIAGSSSKYIKIIMNLVLLSFVIGSLM
>Mature_279_residues
MNLKIKYYLELIRVKNCLTASFGTIIGGLIASNFNFGLIGYILLASLIVFLVCGFGNALNDIQDIEIDKINKPNRPLPSN
KISLKSATIFSYLLMISGIIISLFNMICFAIALINSIVLYLYAKKYKRNKIIGNLIVAYLTGSIFIFGGASVGNVEITLI
LFLCALFATWSREIIKDYEDLDGDKSEGVISLPIKYGKNSIFVAIGFLLCSILLSPLPYILGMFGAPYLMAIMICNVLFI
LAVLKLLKNPSKEIAGSSSKYIKIIMNLVLLSFVIGSLM

Specific function: Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesi

COG id: COG0382

COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiA prenyltransferase family. DGGGP synthase subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DGGGP_META3 (A6UVU6)

Other databases:

- EMBL:   CP000743
- RefSeq:   YP_001325230.1
- STRING:   A6UVU6
- GeneID:   5326667
- GenomeReviews:   CP000743_GR
- KEGG:   mae:Maeo_1040
- eggNOG:   arNOG05783
- HOGENOM:   HBG667825
- OMA:   INRPERP
- ProtClustDB:   PRK09573
- BioCyc:   MAEO419665:MAEO_1040-MONOMER
- HAMAP:   MF_01286
- InterPro:   IPR000537

Pfam domain/function: PF01040 UbiA

EC number: =2.5.1.42

Molecular weight: Translated: 30703; Mature: 30703

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1f6fa1fc)-; HASH(0x1fca5a54)-; HASH(0x1e540030)-; HASH(0x1e95d510)-; HASH(0x1f8d2d3c)-; HASH(0x1ee75510)-; HASH(0x1fd1db70)-; HASH(0x1f8a53b0)-;

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKIKYYLELIRVKNCLTASFGTIIGGLIASNFNFGLIGYILLASLIVFLVCGFGNALN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHC
DIQDIEIDKINKPNRPLPSNKISLKSATIFSYLLMISGIIISLFNMICFAIALINSIVLY
CHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYAKKYKRNKIIGNLIVAYLTGSIFIFGGASVGNVEITLILFLCALFATWSREIIKDYED
HHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LDGDKSEGVISLPIKYGKNSIFVAIGFLLCSILLSPLPYILGMFGAPYLMAIMICNVLFI
CCCCCCCCEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
LAVLKLLKNPSKEIAGSSSKYIKIIMNLVLLSFVIGSLM
HHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MNLKIKYYLELIRVKNCLTASFGTIIGGLIASNFNFGLIGYILLASLIVFLVCGFGNALN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHC
DIQDIEIDKINKPNRPLPSNKISLKSATIFSYLLMISGIIISLFNMICFAIALINSIVLY
CHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYAKKYKRNKIIGNLIVAYLTGSIFIFGGASVGNVEITLILFLCALFATWSREIIKDYED
HHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LDGDKSEGVISLPIKYGKNSIFVAIGFLLCSILLSPLPYILGMFGAPYLMAIMICNVLFI
CCCCCCCCEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
LAVLKLLKNPSKEIAGSSSKYIKIIMNLVLLSFVIGSLM
HHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA