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The map label for this gene is yoaA [C]

Identifier: 150401403

GI number: 150401403

Start: 999079

End: 1001199

Strand: Reverse

Name: yoaA [C]

Synonym: Maeo_0979

Alternate gene names: 150401403

Gene position: 1001199-999079 (Counterclockwise)

Preceding gene: 150401404

Following gene: 150401402

Centisome position: 63.79

GC content: 29.51

Gene sequence:

>2121_bases
ATGAACATAAAGGACAGGGATTTTTTAGAATTTAAAGAGTATTATTCCTCTAATTTTCCATATTATGAACCGCGACCACA
ACAAAAGAAAATGATGGAAAGCATATTTTACAGCATAGTCAATAAAAAAAATTTAGTTGTGGAAGCTCCAACGGGGGTTG
GAAAAACTTTATCCTACTTATTACCTTCTTTATATTTTGCAAAACAGGGAAAAAGAGTAATGATATTAACGGAAACAATA
GACCAACAGGAGCGAATTTTTGAGGATTTAAATTCTTTAAAACATAATTTAAAAGTATCTTTTATGATGGGAAAAGGGAA
TTTCTATTGTAAAGCTAAGGAGGATAAGGCAAATAGGCTGTATTGCCAATACAATAAAAAATGCTCCCATAGACCCAATA
AAAAACCATATTGCAATTGTGGAACTAAAAAGGAGATTATAAAACTAAATGATGATGAGCCAAAATATTATTGTCCTTTT
TGTATATGTGATTATCAAAAGGCAAAAATACAGGGGCTTGATGCCGATATTATAGTAATGAACAATAGCATATATTACTA
TATTAAAGATGAAATTGATGTAAAAAGAAATACTGATATAATAATCTGCGATGAAGCCCATAAATTAGAGGGAAGTATAA
GAAATTCTGCAACAATATCCATAAATCCAGATAATGCCTTAAATAGATTAAGAATTATGGCATATAATTATGCTCCAAAT
ACAATAAAAAAGTATATTAAAAGACTAAATGATGAATATGAACAATATGATGAGAATTACAATAGATTGGGATATTTTAA
TCAATCCTACAATGAGGAGTTTTGGAATATTATAAATAATTTCGTTTCAAAATATGCCGATATATCGGATTGTAAAAATA
CTTTAATATTTGACGGAGAAAGGATTACATCATTTGGGTTAAAAGAGGATGTTGCAATATTGGGAACTCTTCTTGATGGA
TACAACCAAATAATAAAAATTAAAAATAAAATAAATTTATTTGAGGAAAACAGGGAGCTCCGTAAAAAAGAGCTTGACTT
TAAAATTGATAATAAGGCATTGGTGCCTATTGAGTTTCAATATATATTTGATAGAAGGGTATCCGATATGCCACTTATGG
AGTTTTTGGATAGCATAAAGGATTTAAAAACCATAAATAGCAATTTTGTAATATATAAAAGCGGAAATAGTAATAATAAT
AATAATAATAATAATAATAGTAATAATAATAGTAATAATAATAGTGGCAGTAGAAGCAATAGTAATTTACTGTGTGAGCC
TGTTGCCGTATCAAATTATCTTAAAAATCTATACAATGGAGCAACAGTTATTCACTGTTCCGCTACGCTGGGAAACTTAA
AAATCCATGCACTTAAAACAGGTATGGGGAGCTCCCAAACATTAACTCTGGATAGTCCATTTTCAGAGCACAGAAGAAAA
ATAATTGCATTACGGGACGGAGAGGAAATGAAATATGATAGTAATAAGGAAAAAAAACGAAATAAGGCAAATAATAATAT
ATTAAAATTGTTAAAATCTGCTAAATGTAATAGTTTGGTGCTTTTTAAAAGTTTTGAGGATTTAAATAGCTGTTATGCTC
ATTTATTAAACAACAACAATTTATTAAATCAAAAAATTTATATTTATGAGGCTGGAATGGACGGAAAAGAGGCAAAAGAA
TTAAAGGAAAAATTTGAAAGAAATGGGGGCATATTACTTGCAACGGGTAGATTTGCCGAGGGTGTCGATATTCCACGGGA
GGCATTAACAATGGTAATTATAGATAGCCTTCCGTTCCCTGTTCCAACTCCATTAATTAACAGAGAGCAAAAAATGATAG
AAGACGGATTAAAAAGAAAAAAAGTAAATAACGCAAATTGGACTGCCTTTTTAATGACTTCATTTCATATTATGTCAAGA
ACAATTATTCAAATGATAGGTAGATTAATTAGGACCGAGGAAGATTATGGTGTCGTAGTTATTCAAGATAAGCGATTTAA
TGATTGGGTTGCCGATAAAATGAAGGAGAGAGGATATTTAAAATATGACCATCTTTCTATGAATTTAAAAGATGCCGAGG
AATTTATACCGCGATTTTTAAATGAATTTAGAAATAAATAA

Upstream 100 bases:

>100_bases
ATAATCACAGAAAACACATATATATTATATATTATAGCTCCGAACAAACTAAAACAACATACAGCAAATACAACACACTA
CATAATAAATTGGTGATTTA

Downstream 100 bases:

>100_bases
TATATAATAAATATACAAATATTTAATAATAAAAATAATAAAAATTAACAATAATAAAAATAATATGGGTAATATTATAT
GATTACAGTAGGAATAGACC

Product: helicase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 706; Mature: 706

Protein sequence:

>706_residues
MNIKDRDFLEFKEYYSSNFPYYEPRPQQKKMMESIFYSIVNKKNLVVEAPTGVGKTLSYLLPSLYFAKQGKRVMILTETI
DQQERIFEDLNSLKHNLKVSFMMGKGNFYCKAKEDKANRLYCQYNKKCSHRPNKKPYCNCGTKKEIIKLNDDEPKYYCPF
CICDYQKAKIQGLDADIIVMNNSIYYYIKDEIDVKRNTDIIICDEAHKLEGSIRNSATISINPDNALNRLRIMAYNYAPN
TIKKYIKRLNDEYEQYDENYNRLGYFNQSYNEEFWNIINNFVSKYADISDCKNTLIFDGERITSFGLKEDVAILGTLLDG
YNQIIKIKNKINLFEENRELRKKELDFKIDNKALVPIEFQYIFDRRVSDMPLMEFLDSIKDLKTINSNFVIYKSGNSNNN
NNNNNNSNNNSNNNSGSRSNSNLLCEPVAVSNYLKNLYNGATVIHCSATLGNLKIHALKTGMGSSQTLTLDSPFSEHRRK
IIALRDGEEMKYDSNKEKKRNKANNNILKLLKSAKCNSLVLFKSFEDLNSCYAHLLNNNNLLNQKIYIYEAGMDGKEAKE
LKEKFERNGGILLATGRFAEGVDIPREALTMVIIDSLPFPVPTPLINREQKMIEDGLKRKKVNNANWTAFLMTSFHIMSR
TIIQMIGRLIRTEEDYGVVVIQDKRFNDWVADKMKERGYLKYDHLSMNLKDAEEFIPRFLNEFRNK

Sequences:

>Translated_706_residues
MNIKDRDFLEFKEYYSSNFPYYEPRPQQKKMMESIFYSIVNKKNLVVEAPTGVGKTLSYLLPSLYFAKQGKRVMILTETI
DQQERIFEDLNSLKHNLKVSFMMGKGNFYCKAKEDKANRLYCQYNKKCSHRPNKKPYCNCGTKKEIIKLNDDEPKYYCPF
CICDYQKAKIQGLDADIIVMNNSIYYYIKDEIDVKRNTDIIICDEAHKLEGSIRNSATISINPDNALNRLRIMAYNYAPN
TIKKYIKRLNDEYEQYDENYNRLGYFNQSYNEEFWNIINNFVSKYADISDCKNTLIFDGERITSFGLKEDVAILGTLLDG
YNQIIKIKNKINLFEENRELRKKELDFKIDNKALVPIEFQYIFDRRVSDMPLMEFLDSIKDLKTINSNFVIYKSGNSNNN
NNNNNNSNNNSNNNSGSRSNSNLLCEPVAVSNYLKNLYNGATVIHCSATLGNLKIHALKTGMGSSQTLTLDSPFSEHRRK
IIALRDGEEMKYDSNKEKKRNKANNNILKLLKSAKCNSLVLFKSFEDLNSCYAHLLNNNNLLNQKIYIYEAGMDGKEAKE
LKEKFERNGGILLATGRFAEGVDIPREALTMVIIDSLPFPVPTPLINREQKMIEDGLKRKKVNNANWTAFLMTSFHIMSR
TIIQMIGRLIRTEEDYGVVVIQDKRFNDWVADKMKERGYLKYDHLSMNLKDAEEFIPRFLNEFRNK
>Mature_706_residues
MNIKDRDFLEFKEYYSSNFPYYEPRPQQKKMMESIFYSIVNKKNLVVEAPTGVGKTLSYLLPSLYFAKQGKRVMILTETI
DQQERIFEDLNSLKHNLKVSFMMGKGNFYCKAKEDKANRLYCQYNKKCSHRPNKKPYCNCGTKKEIIKLNDDEPKYYCPF
CICDYQKAKIQGLDADIIVMNNSIYYYIKDEIDVKRNTDIIICDEAHKLEGSIRNSATISINPDNALNRLRIMAYNYAPN
TIKKYIKRLNDEYEQYDENYNRLGYFNQSYNEEFWNIINNFVSKYADISDCKNTLIFDGERITSFGLKEDVAILGTLLDG
YNQIIKIKNKINLFEENRELRKKELDFKIDNKALVPIEFQYIFDRRVSDMPLMEFLDSIKDLKTINSNFVIYKSGNSNNN
NNNNNNSNNNSNNNSGSRSNSNLLCEPVAVSNYLKNLYNGATVIHCSATLGNLKIHALKTGMGSSQTLTLDSPFSEHRRK
IIALRDGEEMKYDSNKEKKRNKANNNILKLLKSAKCNSLVLFKSFEDLNSCYAHLLNNNNLLNQKIYIYEAGMDGKEAKE
LKEKFERNGGILLATGRFAEGVDIPREALTMVIIDSLPFPVPTPLINREQKMIEDGLKRKKVNNANWTAFLMTSFHIMSR
TIIQMIGRLIRTEEDYGVVVIQDKRFNDWVADKMKERGYLKYDHLSMNLKDAEEFIPRFLNEFRNK

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR001650
- InterPro:   IPR006935 [H]

Pfam domain/function: PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 82189; Mature: 82189

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKDRDFLEFKEYYSSNFPYYEPRPQQKKMMESIFYSIVNKKNLVVEAPTGVGKTLSYL
CCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH
LPSLYFAKQGKRVMILTETIDQQERIFEDLNSLKHNLKVSFMMGKGNFYCKAKEDKANRL
HHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCEEEEEEEECCCEEEEECCCCCCEE
YCQYNKKCSHRPNKKPYCNCGTKKEIIKLNDDEPKYYCPFCICDYQKAKIQGLDADIIVM
EEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEECCEEEECCCHHHHCCCCEEEEEE
NNSIYYYIKDEIDVKRNTDIIICDEAHKLEGSIRNSATISINPDNALNRLRIMAYNYAPN
ECEEEEEEECCCCEECCCCEEEECCCHHHCCCCCCCEEEEECCCHHCCEEEEEEEECCCH
TIKKYIKRLNDEYEQYDENYNRLGYFNQSYNEEFWNIINNFVSKYADISDCKNTLIFDGE
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCEEECCC
RITSFGLKEDVAILGTLLDGYNQIIKIKNKINLFEENRELRKKELDFKIDNKALVPIEFQ
HHCCCCCHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHCCEEECCEEEEEEEEE
YIFDRRVSDMPLMEFLDSIKDLKTINSNFVIYKSGNSNNNNNNNNNSNNNSNNNSGSRSN
EEHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
SNLLCEPVAVSNYLKNLYNGATVIHCSATLGNLKIHALKTGMGSSQTLTLDSPFSEHRRK
CCEEECHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCCCCEEEECCCHHHCCCE
IIALRDGEEMKYDSNKEKKRNKANNNILKLLKSAKCNSLVLFKSFEDLNSCYAHLLNNNN
EEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCC
LLNQKIYIYEAGMDGKEAKELKEKFERNGGILLATGRFAEGVDIPREALTMVIIDSLPFP
EECCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHEECCCCCC
VPTPLINREQKMIEDGLKRKKVNNANWTAFLMTSFHIMSRTIIQMIGRLIRTEEDYGVVV
CCCCCCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
IQDKRFNDWVADKMKERGYLKYDHLSMNLKDAEEFIPRFLNEFRNK
EECCCCCHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNIKDRDFLEFKEYYSSNFPYYEPRPQQKKMMESIFYSIVNKKNLVVEAPTGVGKTLSYL
CCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH
LPSLYFAKQGKRVMILTETIDQQERIFEDLNSLKHNLKVSFMMGKGNFYCKAKEDKANRL
HHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCEEEEEEEECCCEEEEECCCCCCEE
YCQYNKKCSHRPNKKPYCNCGTKKEIIKLNDDEPKYYCPFCICDYQKAKIQGLDADIIVM
EEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEECCEEEECCCHHHHCCCCEEEEEE
NNSIYYYIKDEIDVKRNTDIIICDEAHKLEGSIRNSATISINPDNALNRLRIMAYNYAPN
ECEEEEEEECCCCEECCCCEEEECCCHHHCCCCCCCEEEEECCCHHCCEEEEEEEECCCH
TIKKYIKRLNDEYEQYDENYNRLGYFNQSYNEEFWNIINNFVSKYADISDCKNTLIFDGE
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCEEECCC
RITSFGLKEDVAILGTLLDGYNQIIKIKNKINLFEENRELRKKELDFKIDNKALVPIEFQ
HHCCCCCHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHCCEEECCEEEEEEEEE
YIFDRRVSDMPLMEFLDSIKDLKTINSNFVIYKSGNSNNNNNNNNNSNNNSNNNSGSRSN
EEHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
SNLLCEPVAVSNYLKNLYNGATVIHCSATLGNLKIHALKTGMGSSQTLTLDSPFSEHRRK
CCEEECHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCCCCEEEECCCHHHCCCE
IIALRDGEEMKYDSNKEKKRNKANNNILKLLKSAKCNSLVLFKSFEDLNSCYAHLLNNNN
EEEEECCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCC
LLNQKIYIYEAGMDGKEAKELKEKFERNGGILLATGRFAEGVDIPREALTMVIIDSLPFP
EECCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHEECCCCCC
VPTPLINREQKMIEDGLKRKKVNNANWTAFLMTSFHIMSRTIIQMIGRLIRTEEDYGVVV
CCCCCCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
IQDKRFNDWVADKMKERGYLKYDHLSMNLKDAEEFIPRFLNEFRNK
EECCCCCHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]