| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401404
Identifier: 150401404
GI number: 150401404
Start: 1001533
End: 1003092
Strand: Reverse
Name: 150401404
Synonym: Maeo_0980
Alternate gene names: NA
Gene position: 1003092-1001533 (Counterclockwise)
Preceding gene: 150401405
Following gene: 150401403
Centisome position: 63.91
GC content: 30.38
Gene sequence:
>1560_bases ATGAAAAATACAGCATATTTTTGTATGGAATTTGGAATTGACCAAATGTTAAAAAATTATGCAGGAGGATTAGGATATTT GGCGGGCTCTCATTTTAGGTCCGCATATAATTTAAATCTACCTCTTGTTGGAGTATCCATGCTATGGAGTTATGGATATT ATGACCAGATAAGGGATAAAGAAGGACAAATGAATGTTCATTATGTTAGAAAATATTATGAATTTTTAGAAGATATTGAT TTAAAAGTTTCTGTAAATATATATGGTTCCACAGTATGGGTAAAAGTATATAAATTAAATAGCGATATTTTTGAAACTTG TCCAATATATTTTTTAACAACAGATATACCCGAAAATTATTATTTATCGCGAACAATATCTCATAAATTATATGATGGCA ATAATTTGACCCATATTGCACAGGAAATAGTTTTAGGTGTGGCAGGATATAAAGTGATGCAAAAATGTGAAAACATTGAT ATATACCATATTAATGAGGCACAATCATTGCCATTAGGGTTTAAAATGATTGAAGAATATGGATTGGATTATGTTAAAAA TCATCTCGTTTTTACTACCCATACACCAGTATCAGCAGGAAATGAAGTTCATGATATAAATTTATTAAATAAAATGGGAT TTTTTAGTGGAGTAGATATAACTGTTGCTAAAAAATTAGGTGGAGCTCCTTTTAATTTAACTGTGGCGGCGTTAAGGATG TCAAAAAAAGCAAATGCTGTTTCAAAATTACATAATGAAACGACAAATAACATGTGGGATTTTATTAAGGATAAATGCGA AATAACATATATAACAAATGCCCAAGACAAAAACTACTGGCAAGACCCAATTATAAGAAATGCTGCAAAAAATTATGATT ATGATAAATTAAGAGACAGAAAAAGGGAATTAAAAGAACTATTATTTGAAGAAGTTGCAGACCAGACAGGAAAAATATTG GACCCAGATATAATGACTGTTGTATGGGCAAGGCGATTTACAGAATATAAAAGACCAAACCTTTTACTGCATGATGAGGA TAAATTAAAAAAGCTTCTTGATGATAAAAAATTACAAGTAATTTGGGCAGGAAAACCACATCCAAATGATACAAATTCTC AAATAACATTTAATTGGATTATTTCAAAAACAAGGAATTTAAAGGGAACTGCCATATTAACAGGATATGAATTAAAATTA AGTAAAATGTTAAAACAGGGTTCAGATGTATGGTTGAATACTCCAAAAAGACCAAATGAGGCTTCTGGAACATCTGGAAT GAGTGCTTCAATGAATGCATCAATACATTTAAGCACCCTTGATGGTTGGCATGCTGAATGGGCTGAAATGTATCCTGACA ACAGCTATACTATAGGAGATTGTAAAAATATCCACGATGCATATGAGGCAAATTGTATGTATAATCACTTTGAAATTATG TCCAATATATATGATACAGAGGAATGGTGGAATAAGGCATGTAATTGTGTAAATGATATTGTTAAATATTTCGATTCCGA GAGAATGGTAAAGGAATATGCGGAAAAAATGTATATTTAA
Upstream 100 bases:
>100_bases ACCATTAGGGTCAGATATTAAATATATTAAATATAATATGGCGATTAGAGATATGAGGATGCAAGTTCTCGGCATATAGT CTGGTTAAGGTGGTGTAATT
Downstream 100 bases:
>100_bases TAATACATTAGATATCTACCTATGAATCCATAGGCTAATAATTTATAAACCATATATTTTTTTAATTATTTTTTATATAG TCAATCTTCGGTCGTTTTCA
Product: alpha-glucan phosphorylase
Products: (1,4-alpha-D-glucosyl)n-1; alpha-D-glucose 1-phosphate
Alternate protein names: NA
Number of amino acids: Translated: 519; Mature: 519
Protein sequence:
>519_residues MKNTAYFCMEFGIDQMLKNYAGGLGYLAGSHFRSAYNLNLPLVGVSMLWSYGYYDQIRDKEGQMNVHYVRKYYEFLEDID LKVSVNIYGSTVWVKVYKLNSDIFETCPIYFLTTDIPENYYLSRTISHKLYDGNNLTHIAQEIVLGVAGYKVMQKCENID IYHINEAQSLPLGFKMIEEYGLDYVKNHLVFTTHTPVSAGNEVHDINLLNKMGFFSGVDITVAKKLGGAPFNLTVAALRM SKKANAVSKLHNETTNNMWDFIKDKCEITYITNAQDKNYWQDPIIRNAAKNYDYDKLRDRKRELKELLFEEVADQTGKIL DPDIMTVVWARRFTEYKRPNLLLHDEDKLKKLLDDKKLQVIWAGKPHPNDTNSQITFNWIISKTRNLKGTAILTGYELKL SKMLKQGSDVWLNTPKRPNEASGTSGMSASMNASIHLSTLDGWHAEWAEMYPDNSYTIGDCKNIHDAYEANCMYNHFEIM SNIYDTEEWWNKACNCVNDIVKYFDSERMVKEYAEKMYI
Sequences:
>Translated_519_residues MKNTAYFCMEFGIDQMLKNYAGGLGYLAGSHFRSAYNLNLPLVGVSMLWSYGYYDQIRDKEGQMNVHYVRKYYEFLEDID LKVSVNIYGSTVWVKVYKLNSDIFETCPIYFLTTDIPENYYLSRTISHKLYDGNNLTHIAQEIVLGVAGYKVMQKCENID IYHINEAQSLPLGFKMIEEYGLDYVKNHLVFTTHTPVSAGNEVHDINLLNKMGFFSGVDITVAKKLGGAPFNLTVAALRM SKKANAVSKLHNETTNNMWDFIKDKCEITYITNAQDKNYWQDPIIRNAAKNYDYDKLRDRKRELKELLFEEVADQTGKIL DPDIMTVVWARRFTEYKRPNLLLHDEDKLKKLLDDKKLQVIWAGKPHPNDTNSQITFNWIISKTRNLKGTAILTGYELKL SKMLKQGSDVWLNTPKRPNEASGTSGMSASMNASIHLSTLDGWHAEWAEMYPDNSYTIGDCKNIHDAYEANCMYNHFEIM SNIYDTEEWWNKACNCVNDIVKYFDSERMVKEYAEKMYI >Mature_519_residues MKNTAYFCMEFGIDQMLKNYAGGLGYLAGSHFRSAYNLNLPLVGVSMLWSYGYYDQIRDKEGQMNVHYVRKYYEFLEDID LKVSVNIYGSTVWVKVYKLNSDIFETCPIYFLTTDIPENYYLSRTISHKLYDGNNLTHIAQEIVLGVAGYKVMQKCENID IYHINEAQSLPLGFKMIEEYGLDYVKNHLVFTTHTPVSAGNEVHDINLLNKMGFFSGVDITVAKKLGGAPFNLTVAALRM SKKANAVSKLHNETTNNMWDFIKDKCEITYITNAQDKNYWQDPIIRNAAKNYDYDKLRDRKRELKELLFEEVADQTGKIL DPDIMTVVWARRFTEYKRPNLLLHDEDKLKKLLDDKKLQVIWAGKPHPNDTNSQITFNWIISKTRNLKGTAILTGYELKL SKMLKQGSDVWLNTPKRPNEASGTSGMSASMNASIHLSTLDGWHAEWAEMYPDNSYTIGDCKNIHDAYEANCMYNHFEIM SNIYDTEEWWNKACNCVNDIVKYFDSERMVKEYAEKMYI
Specific function: Unknown
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011834 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: 2.4.1.1
Molecular weight: Translated: 60108; Mature: 60108
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNTAYFCMEFGIDQMLKNYAGGLGYLAGSHFRSAYNLNLPLVGVSMLWSYGYYDQIRDK CCCCEEHHHHHCHHHHHHHHCCCHHHHHHHHHCCEEECCCCHHHHHHHHHCCCHHHHCCC EGQMNVHYVRKYYEFLEDIDLKVSVNIYGSTVWVKVYKLNSDIFETCPIYFLTTDIPENY CCCCHHHHHHHHHHHHHCCCEEEEEEEECCEEEEEEEEECCCHHHHCCEEEEEECCCCCC YLSRTISHKLYDGNNLTHIAQEIVLGVAGYKVMQKCENIDIYHINEAQSLPLGFKMIEEY EEHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHH GLDYVKNHLVFTTHTPVSAGNEVHDINLLNKMGFFSGVDITVAKKLGGAPFNLTVAALRM CHHHHHCCEEEEECCCCCCCCCEEEHHHHHHHCCCCCCCEEEEHHCCCCCCCHHHHHHHH SKKANAVSKLHNETTNNMWDFIKDKCEITYITNAQDKNYWQDPIIRNAAKNYDYDKLRDR HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHCCCCHHHHHHH KRELKELLFEEVADQTGKILDPDIMTVVWARRFTEYKRPNLLLHDEDKLKKLLDDKKLQV HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCCCEEE IWAGKPHPNDTNSQITFNWIISKTRNLKGTAILTGYELKLSKMLKQGSDVWLNTPKRPNE EECCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEHHHHHHHHHHCCCCEEEECCCCCCC ASGTSGMSASMNASIHLSTLDGWHAEWAEMYPDNSYTIGDCKNIHDAYEANCMYNHFEIM CCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCEECCCCHHHHHHHHCCCHHHHHHHH SNIYDTEEWWNKACNCVNDIVKYFDSERMVKEYAEKMYI HHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC >Mature Secondary Structure MKNTAYFCMEFGIDQMLKNYAGGLGYLAGSHFRSAYNLNLPLVGVSMLWSYGYYDQIRDK CCCCEEHHHHHCHHHHHHHHCCCHHHHHHHHHCCEEECCCCHHHHHHHHHCCCHHHHCCC EGQMNVHYVRKYYEFLEDIDLKVSVNIYGSTVWVKVYKLNSDIFETCPIYFLTTDIPENY CCCCHHHHHHHHHHHHHCCCEEEEEEEECCEEEEEEEEECCCHHHHCCEEEEEECCCCCC YLSRTISHKLYDGNNLTHIAQEIVLGVAGYKVMQKCENIDIYHINEAQSLPLGFKMIEEY EEHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHH GLDYVKNHLVFTTHTPVSAGNEVHDINLLNKMGFFSGVDITVAKKLGGAPFNLTVAALRM CHHHHHCCEEEEECCCCCCCCCEEEHHHHHHHCCCCCCCEEEEHHCCCCCCCHHHHHHHH SKKANAVSKLHNETTNNMWDFIKDKCEITYITNAQDKNYWQDPIIRNAAKNYDYDKLRDR HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHCCCCHHHHHHH KRELKELLFEEVADQTGKILDPDIMTVVWARRFTEYKRPNLLLHDEDKLKKLLDDKKLQV HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCCCEEE IWAGKPHPNDTNSQITFNWIISKTRNLKGTAILTGYELKLSKMLKQGSDVWLNTPKRPNE EECCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEHHHHHHHHHHCCCCEEEECCCCCCC ASGTSGMSASMNASIHLSTLDGWHAEWAEMYPDNSYTIGDCKNIHDAYEANCMYNHFEIM CCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCEECCCCHHHHHHHHCCCHHHHHHHH SNIYDTEEWWNKACNCVNDIVKYFDSERMVKEYAEKMYI HHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: (1,4-alpha-D-glucosyl)n; phosphate
Specific reaction: (1,4-alpha-D-glucosyl)n + phosphate = (1,4-alpha-D-glucosyl)n-1 + alpha-D-glucose 1-phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]