| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401402
Identifier: 150401402
GI number: 150401402
Start: 998017
End: 999000
Strand: Reverse
Name: 150401402
Synonym: Maeo_0978
Alternate gene names: NA
Gene position: 999000-998017 (Counterclockwise)
Preceding gene: 150401403
Following gene: 150401401
Centisome position: 63.65
GC content: 30.79
Gene sequence:
>984_bases ATGATTACAGTAGGAATAGACCACGGAACATCGGGAATTAAAGTATGTATAAAAAACAATGATAAAACCATTACTACATA CTTTAAAATGAGTAGAACAGAATTAAAAAATAAATCTTTTTTAGGAGAATTAAATAAATACGAAAATTTAAGAGACATCG ATTTAATTGCTATGGGCTATTCAATGGGAGATGGTATAAATGAAATACTTCCAATAGAAAAGGTGGAAAATAGGGGAGTA ATAAACATAGAGGGCGTAGGAGAAAAGGTCGGGGGAGGAACTAAAATGTACGATGAAATTAAAAATTCAAATATTCCCAC AGTGGTAATTCCCGGACTTCATAAAAATATTGAATGTATTGATGCGAGATTTAGGGCTTTATACTCTCATATGGCTTCAC CAGAAAAAATATCAATTGCCTACTGTGCCTACAAAACCTATGGATTTAATAACTTCATATTGTCCGATATTTCTTCAAAT ACCGTTAGTTTATTGATAAAGGATAAAAAATTATTTGGTGGATTTGATGCCTGTATCGGAGCTCCCGGGCTATTGCATGG GGCTATTGATTTAGAGATGATAAGAGATATAGATAGTAATAAAATTACGGCAAATGAAGCATTTTCAACAGCAGGAGTAA TAAAAGTTGTTATTGATAAATATAAAGGAGTAGAAAACACCAAAGAGGAAATTTTAAAAAATTATAAAACAGATGAAAAA TGTAAATTGGCAATTGATACATTAATATTAAGTGTTGCTATGGAAATTAATTCTTTAATGTTTTTAAATCCCGATAAAAA CATCGTATTGGCAGGTTCAATTGCTACAACAAAAGAATATAATTTAGTGGATAAATTGAAGGAATATATTAAAGGAAATA TTTATATTTTGGAGGGTGAAAGTGGAGCTCTCGGGGGGGCCCTGATTGCAGAGGACATTTTAAATGGTAAAAAAGATATT TTGGGTATACCAGTTAATATTTAA
Upstream 100 bases:
>100_bases AAATGAATTTAGAAATAAATAATATATAATAAATATACAAATATTTAATAATAAAAATAATAAAAATTAACAATAATAAA AATAATATGGGTAATATTAT
Downstream 100 bases:
>100_bases TTTATTATTAATTAATTAGTTAATTAATAAATTATTATTTTGGGTAATTCTTCGGAGCTCCGAACAATCAATGTCTTGAT ACGATTATAATAAAATAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MITVGIDHGTSGIKVCIKNNDKTITTYFKMSRTELKNKSFLGELNKYENLRDIDLIAMGYSMGDGINEILPIEKVENRGV INIEGVGEKVGGGTKMYDEIKNSNIPTVVIPGLHKNIECIDARFRALYSHMASPEKISIAYCAYKTYGFNNFILSDISSN TVSLLIKDKKLFGGFDACIGAPGLLHGAIDLEMIRDIDSNKITANEAFSTAGVIKVVIDKYKGVENTKEEILKNYKTDEK CKLAIDTLILSVAMEINSLMFLNPDKNIVLAGSIATTKEYNLVDKLKEYIKGNIYILEGESGALGGALIAEDILNGKKDI LGIPVNI
Sequences:
>Translated_327_residues MITVGIDHGTSGIKVCIKNNDKTITTYFKMSRTELKNKSFLGELNKYENLRDIDLIAMGYSMGDGINEILPIEKVENRGV INIEGVGEKVGGGTKMYDEIKNSNIPTVVIPGLHKNIECIDARFRALYSHMASPEKISIAYCAYKTYGFNNFILSDISSN TVSLLIKDKKLFGGFDACIGAPGLLHGAIDLEMIRDIDSNKITANEAFSTAGVIKVVIDKYKGVENTKEEILKNYKTDEK CKLAIDTLILSVAMEINSLMFLNPDKNIVLAGSIATTKEYNLVDKLKEYIKGNIYILEGESGALGGALIAEDILNGKKDI LGIPVNI >Mature_327_residues MITVGIDHGTSGIKVCIKNNDKTITTYFKMSRTELKNKSFLGELNKYENLRDIDLIAMGYSMGDGINEILPIEKVENRGV INIEGVGEKVGGGTKMYDEIKNSNIPTVVIPGLHKNIECIDARFRALYSHMASPEKISIAYCAYKTYGFNNFILSDISSN TVSLLIKDKKLFGGFDACIGAPGLLHGAIDLEMIRDIDSNKITANEAFSTAGVIKVVIDKYKGVENTKEEILKNYKTDEK CKLAIDTLILSVAMEINSLMFLNPDKNIVLAGSIATTKEYNLVDKLKEYIKGNIYILEGESGALGGALIAEDILNGKKDI LGIPVNI
Specific function: Unknown
COG id: COG4020
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0285 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y978_META3 (A6UVN4)
Other databases:
- EMBL: CP000743 - RefSeq: YP_001325168.1 - STRING: A6UVN4 - GeneID: 5327149 - GenomeReviews: CP000743_GR - KEGG: mae:Maeo_0978 - eggNOG: arNOG04862 - HOGENOM: HBG539696 - OMA: DHGTSGI - ProtClustDB: PRK00976 - BioCyc: MAEO419665:MAEO_0978-MONOMER - HAMAP: MF_01087 - InterPro: IPR009927 - InterPro: IPR016735 - PIRSF: PIRSF018783 - TIGRFAMs: TIGR03281
Pfam domain/function: PF07318 DUF1464
EC number: NA
Molecular weight: Translated: 35861; Mature: 35861
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITVGIDHGTSGIKVCIKNNDKTITTYFKMSRTELKNKSFLGELNKYENLRDIDLIAMGY CEEEEECCCCCCEEEEEECCCCEEEEEEEEHHHHHCCHHHHHHHHHCCCCCCEEEEEECC SMGDGINEILPIEKVENRGVINIEGVGEKVGGGTKMYDEIKNSNIPTVVIPGLHKNIECI CCCCCHHHHCCCHHHCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCEEEECCCCCCHHHH DARFRALYSHMASPEKISIAYCAYKTYGFNNFILSDISSNTVSLLIKDKKLFGGFDACIG HHHHHHHHHHHCCCCEEEEEEEEEEECCCCCEEEECCCCCEEEEEEECCHHHCCHHHHHC APGLLHGAIDLEMIRDIDSNKITANEAFSTAGVIKVVIDKYKGVENTKEEILKNYKTDEK CCCHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCH CKLAIDTLILSVAMEINSLMFLNPDKNIVLAGSIATTKEYNLVDKLKEYIKGNIYILEGE HHHHHHHHHHHHHHHHCEEEEECCCCCEEEEECEECCCCHHHHHHHHHHHCCCEEEEECC SGALGGALIAEDILNGKKDILGIPVNI CCCCCHHHHHHHHHCCCCCEEEECCCC >Mature Secondary Structure MITVGIDHGTSGIKVCIKNNDKTITTYFKMSRTELKNKSFLGELNKYENLRDIDLIAMGY CEEEEECCCCCCEEEEEECCCCEEEEEEEEHHHHHCCHHHHHHHHHCCCCCCEEEEEECC SMGDGINEILPIEKVENRGVINIEGVGEKVGGGTKMYDEIKNSNIPTVVIPGLHKNIECI CCCCCHHHHCCCHHHCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCEEEECCCCCCHHHH DARFRALYSHMASPEKISIAYCAYKTYGFNNFILSDISSNTVSLLIKDKKLFGGFDACIG HHHHHHHHHHHCCCCEEEEEEEEEEECCCCCEEEECCCCCEEEEEEECCHHHCCHHHHHC APGLLHGAIDLEMIRDIDSNKITANEAFSTAGVIKVVIDKYKGVENTKEEILKNYKTDEK CCCHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCH CKLAIDTLILSVAMEINSLMFLNPDKNIVLAGSIATTKEYNLVDKLKEYIKGNIYILEGE HHHHHHHHHHHHHHHHCEEEEECCCCCEEEEECEECCCCHHHHHHHHHHHCCCEEEEECC SGALGGALIAEDILNGKKDILGIPVNI CCCCCHHHHHHHHHCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA