| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is cofG [H]
Identifier: 150401338
GI number: 150401338
Start: 935057
End: 936199
Strand: Reverse
Name: cofG [H]
Synonym: Maeo_0911
Alternate gene names: 150401338
Gene position: 936199-935057 (Counterclockwise)
Preceding gene: 150401339
Following gene: 150401337
Centisome position: 59.65
GC content: 29.57
Gene sequence:
>1143_bases ATGAATAATATTAATGAAATAGAAGCGAAGCTTCTATACCCAAATCAAAGATTTGAGGATTTCCTATCGGAAATGGTGGA ATTTCTAAATTCAAAAAATCCACAAGATATAATTGATAAATTAAGTCTGATAAATAATAATGGAAATAAAAATATCGGTA ATGGCAATAAAACCAATAACAAAAAATATATCACTTACTCAAAAAATGTATTTATTCCAATATGTAATTGGTGCAAAAAC ATTTGCGGATATTGCACATTTAGGAGAGAAAACTACAAACTGATGAATAAACAGGAAATAAAAGAAATATTATTAACTGG AAATAAACATGGTTGTAGGGAGGCATTATTTACCTTTGGTGAAACCGTAGACGAAAATCCAAAAATAAAAGAAGATTTAA AGAAAATGGGATACAACAATATTTTAGAATATTTATATGATATTTCCGACTGGTGTTTAACTAATACGGACCTATTGCCA CATACAAATTGCGGGATATTATCCTATGAGGAATTAAAAACATTAAAAGAAGTAAATGCTTCCATGGGGCTCATGCTTGA AAATTCTAGCGATAGGCTGTATAATACGATAGCCCACAAAGATAGCCCCGGAAAAGAACCAAAGAAACGATTAAAAATGA TTGAAGATGCAGGAAAACTCAAAATACCTTTTACAACTGGAATATTGGTTGGTATTGGGGAAACCAATGAAGAAATTGTT CAATCATTAGTTGATATTAACAATATTCATAAAAAATACGGTCATATTCAAGAAGTAATTATTCAAAATTTTAGGGCAAA GGAAAGCATTCCTATGAGTAATTATGAAGAACCAACTCCTTTAAAAATGTTAAAAGTGCTAATTGTGGCAAAATTAATAT TAAAAGATATATCTATTCAAGTTCCTCCTAATTTAAATTCTGAAACAGGTCAGCTGTTTTTATTTGCTGGTGTTGATGAT TGGGGAGGGGTGTCGCCCATTACAAAAGATTTTGTAAATCCAGAGGCACCATGGCCAAAAATAGAGGAATTAAAAAAATA TACCGAAGAATTTGGATATTCGTTAAAAGAAAGATTGCCAGTTTATGAAAAATATATCAATGAAAATTGGTTAAGTTGTA AAGTTTTAGAAAAAATAAAATAG
Upstream 100 bases:
>100_bases TATTATAGGGGATACGATATATTTGATAAAATATGTGAGGAAATGGAACAATTTTTAATTGAAAAAAATATTAAATTAAA AGATATTGTTGGGGGAGCTC
Downstream 100 bases:
>100_bases TAAAAACTTAAAAAAGGTAGATTCAGGTCGGGTAAGTTTCATCATAAAATCAGACAACCCTCTTTTCATCATTATCTACT TTAAGCATGTGTTCGCATGT
Product: FO synthase subunit 1
Products: NA
Alternate protein names: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1 [H]
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MNNINEIEAKLLYPNQRFEDFLSEMVEFLNSKNPQDIIDKLSLINNNGNKNIGNGNKTNNKKYITYSKNVFIPICNWCKN ICGYCTFRRENYKLMNKQEIKEILLTGNKHGCREALFTFGETVDENPKIKEDLKKMGYNNILEYLYDISDWCLTNTDLLP HTNCGILSYEELKTLKEVNASMGLMLENSSDRLYNTIAHKDSPGKEPKKRLKMIEDAGKLKIPFTTGILVGIGETNEEIV QSLVDINNIHKKYGHIQEVIIQNFRAKESIPMSNYEEPTPLKMLKVLIVAKLILKDISIQVPPNLNSETGQLFLFAGVDD WGGVSPITKDFVNPEAPWPKIEELKKYTEEFGYSLKERLPVYEKYINENWLSCKVLEKIK
Sequences:
>Translated_380_residues MNNINEIEAKLLYPNQRFEDFLSEMVEFLNSKNPQDIIDKLSLINNNGNKNIGNGNKTNNKKYITYSKNVFIPICNWCKN ICGYCTFRRENYKLMNKQEIKEILLTGNKHGCREALFTFGETVDENPKIKEDLKKMGYNNILEYLYDISDWCLTNTDLLP HTNCGILSYEELKTLKEVNASMGLMLENSSDRLYNTIAHKDSPGKEPKKRLKMIEDAGKLKIPFTTGILVGIGETNEEIV QSLVDINNIHKKYGHIQEVIIQNFRAKESIPMSNYEEPTPLKMLKVLIVAKLILKDISIQVPPNLNSETGQLFLFAGVDD WGGVSPITKDFVNPEAPWPKIEELKKYTEEFGYSLKERLPVYEKYINENWLSCKVLEKIK >Mature_380_residues MNNINEIEAKLLYPNQRFEDFLSEMVEFLNSKNPQDIIDKLSLINNNGNKNIGNGNKTNNKKYITYSKNVFIPICNWCKN ICGYCTFRRENYKLMNKQEIKEILLTGNKHGCREALFTFGETVDENPKIKEDLKKMGYNNILEYLYDISDWCLTNTDLLP HTNCGILSYEELKTLKEVNASMGLMLENSSDRLYNTIAHKDSPGKEPKKRLKMIEDAGKLKIPFTTGILVGIGETNEEIV QSLVDINNIHKKYGHIQEVIIQNFRAKESIPMSNYEEPTPLKMLKVLIVAKLILKDISIQVPPNLNSETGQLFLFAGVDD WGGVSPITKDFVNPEAPWPKIEELKKYTEEFGYSLKERLPVYEKYINENWLSCKVLEKIK
Specific function: Catalyzes the radical-mediated transfer of the hydroxybenzyl group from 4-hydroxyphenylpyruvate (HPP) to 5-amino- 6-ribitylamino-2,4(1H,3H)-pyrimidinedione to form 7,8-didemethyl- 8-hydroxy-5-deazariboflavin (FO) [H]
COG id: COG1060
COG function: function code HR; Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the radical SAM superfamily. CofG family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006638 - InterPro: IPR019939 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 43809; Mature: 43809
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNINEIEAKLLYPNQRFEDFLSEMVEFLNSKNPQDIIDKLSLINNNGNKNIGNGNKTNN CCCHHHHHHEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC KKYITYSKNVFIPICNWCKNICGYCTFRRENYKLMNKQEIKEILLTGNKHGCREALFTFG CEEEEECCCEEEEHHHHHHHHHHHEEECCCCCHHCCHHHHHHHHHCCCCCHHHHHHHHHC ETVDENPKIKEDLKKMGYNNILEYLYDISDWCLTNTDLLPHTNCGILSYEELKTLKEVNA CCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH SMGLMLENSSDRLYNTIAHKDSPGKEPKKRLKMIEDAGKLKIPFTTGILVGIGETNEEIV HHCEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEECCEEEECCCCHHHHH QSLVDINNIHKKYGHIQEVIIQNFRAKESIPMSNYEEPTPLKMLKVLIVAKLILKDISIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEE VPPNLNSETGQLFLFAGVDDWGGVSPITKDFVNPEAPWPKIEELKKYTEEFGYSLKERLP CCCCCCCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHCC VYEKYINENWLSCKVLEKIK HHHHHHCCCCCEEHHHHHCC >Mature Secondary Structure MNNINEIEAKLLYPNQRFEDFLSEMVEFLNSKNPQDIIDKLSLINNNGNKNIGNGNKTNN CCCHHHHHHEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC KKYITYSKNVFIPICNWCKNICGYCTFRRENYKLMNKQEIKEILLTGNKHGCREALFTFG CEEEEECCCEEEEHHHHHHHHHHHEEECCCCCHHCCHHHHHHHHHCCCCCHHHHHHHHHC ETVDENPKIKEDLKKMGYNNILEYLYDISDWCLTNTDLLPHTNCGILSYEELKTLKEVNA CCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH SMGLMLENSSDRLYNTIAHKDSPGKEPKKRLKMIEDAGKLKIPFTTGILVGIGETNEEIV HHCEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEEECCEEEECCCCHHHHH QSLVDINNIHKKYGHIQEVIIQNFRAKESIPMSNYEEPTPLKMLKVLIVAKLILKDISIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEE VPPNLNSETGQLFLFAGVDDWGGVSPITKDFVNPEAPWPKIEELKKYTEEFGYSLKERLP CCCCCCCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHCC VYEKYINENWLSCKVLEKIK HHHHHHCCCCCEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA