Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

Click here to switch to the map view.

The map label for this gene is 150401091

Identifier: 150401091

GI number: 150401091

Start: 679969

End: 680418

Strand: Reverse

Name: 150401091

Synonym: Maeo_0661

Alternate gene names: NA

Gene position: 680418-679969 (Counterclockwise)

Preceding gene: 150401092

Following gene: 150401090

Centisome position: 43.35

GC content: 26.67

Gene sequence:

>450_bases
ATGGGACAAACTTTTAAACCTACCATAATATTTTTGGGAAATAGTATGAAACGAAAAGAGTATTTGGAAAAACTAATTGA
AATAATTGAGGAACTTAAAGAAGAAAGTAAAAAAGGCACACCATTACTTGTTGAGGGAAAAAATGACATATTATCTTTAA
AAAATTTGGGTATTGATGGATATTTTATAAAAGTTTCTAATATTCCTTTTTTTGAGATTGCAGATGAGCTTGTAAAGCAT
AATATCAAAGAAGTTATCTTATTAACTGATTTTGATAGGGCTGGAAGAGATTATGCAAAAGAAATAATTAAAGAATTCCA
AATTAGGGGGATTAAAGTTAATAATGAGATAAGGAAGAATATTTTAAGATATAGTCATGGAGATTTAAAAGATATTGAAG
GATTGCATAGTTATCTAAAAAACAAGGTAATAATGGTAGATAGAGAATGA

Upstream 100 bases:

>100_bases
AATAAGCATAAATCTCAGCCTATTCCTATTCCTAACTAATTTTAATTATAAATTTTATAGTTTATTATATTTTGTGGCAC
ATTAGATTTTTTAGGGCTAT

Downstream 100 bases:

>100_bases
ATAATGAAATAAACACTGAAAATATAGAAATAGAAAATAATAATAAAAATAACAATACAGATAATATAAATGTAAAACCT
TTCGTAATATCAAATGTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MGQTFKPTIIFLGNSMKRKEYLEKLIEIIEELKEESKKGTPLLVEGKNDILSLKNLGIDGYFIKVSNIPFFEIADELVKH
NIKEVILLTDFDRAGRDYAKEIIKEFQIRGIKVNNEIRKNILRYSHGDLKDIEGLHSYLKNKVIMVDRE

Sequences:

>Translated_149_residues
MGQTFKPTIIFLGNSMKRKEYLEKLIEIIEELKEESKKGTPLLVEGKNDILSLKNLGIDGYFIKVSNIPFFEIADELVKH
NIKEVILLTDFDRAGRDYAKEIIKEFQIRGIKVNNEIRKNILRYSHGDLKDIEGLHSYLKNKVIMVDRE
>Mature_148_residues
GQTFKPTIIFLGNSMKRKEYLEKLIEIIEELKEESKKGTPLLVEGKNDILSLKNLGIDGYFIKVSNIPFFEIADELVKHN
IKEVILLTDFDRAGRDYAKEIIKEFQIRGIKVNNEIRKNILRYSHGDLKDIEGLHSYLKNKVIMVDRE

Specific function: Unknown

COG id: COG1658

COG function: function code L; Small primase-like proteins (Toprim domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006171
- InterPro:   IPR022972 [H]

Pfam domain/function: PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 17353; Mature: 17221

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQTFKPTIIFLGNSMKRKEYLEKLIEIIEELKEESKKGTPLLVEGKNDILSLKNLGIDG
CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEHHHHCCCCE
YFIKVSNIPFFEIADELVKHNIKEVILLTDFDRAGRDYAKEIIKEFQIRGIKVNNEIRKN
EEEEECCCCHHHHHHHHHHCCHHHEEEEECCCCCCHHHHHHHHHHHHHCCEEECHHHHHH
ILRYSHGDLKDIEGLHSYLKNKVIMVDRE
HHHCCCCCHHHHHHHHHHHHCCEEEEECC
>Mature Secondary Structure 
GQTFKPTIIFLGNSMKRKEYLEKLIEIIEELKEESKKGTPLLVEGKNDILSLKNLGIDG
CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEHHHHCCCCE
YFIKVSNIPFFEIADELVKHNIKEVILLTDFDRAGRDYAKEIIKEFQIRGIKVNNEIRKN
EEEEECCCCHHHHHHHHHHCCHHHEEEEECCCCCCHHHHHHHHHHHHHCCEEECHHHHHH
ILRYSHGDLKDIEGLHSYLKNKVIMVDRE
HHHCCCCCHHHHHHHHHHHHCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]