Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is gap

Identifier: 150401057

GI number: 150401057

Start: 646396

End: 647418

Strand: Direct

Name: gap

Synonym: Maeo_0627

Alternate gene names: 150401057

Gene position: 646396-647418 (Clockwise)

Preceding gene: 150401054

Following gene: 150401058

Centisome position: 41.18

GC content: 34.6

Gene sequence:

>1023_bases
ATGGCAAAAGTCTTAATAAATGGATATGGTTCAATCGGAAAAAGAGTAGCTGATGCTGTATCAATGCAAAAAGATATGGA
AGTAATAGGAGTTACAAAAACAAGACCGAACTTTGAAGCCGATATGGCAGTTCAAAAAGGATATGATTTATACAGTGCAG
TTGAAGGTAGAGAATCATTATTTGAGGAAAAAGGAATAGATATTCAAGGAAATATATTTGATATTATTGAGGAGGCAGAT
ATTGTTGTAGATTGTGCCCCGGGAGGAATTGGTAAAGATAATATCGAAAATATTTACAAAAAATACAACAAAAAGGCAAT
AGTCCAAGGAGGGGAAAAAGCACCATTTGTAGAGGATAGCTTTAACTCGTTATGGAGCTATGATAGATGCTATGGTAAAA
ATATTATTAGGGCAGTATCTTGTAATACCACAGGATTATGTAGGACGCTATATGCCATAAACTCCACAACAGACATATTA
AAGGCAAGAGTTGTATTAATTAGAAGAGGAGCTGACCCGAACGATGCAAAAAGAGGACCTATTAATGCAATAGTGCCAAA
TCCTCCAACAGTTCCATCTCACCACGGACCAGATGTAGGAACAGTAATTCCAGAATTCAAGGATAAAATAATTACTTCGG
CAATAATTGTTCCTACTACGCTAATGCATATGCACTCTTTAATGGTTGAAACCACTGGAACAACCAAAGACGATGTTATT
GATGCCATCGAAAAAACTCCAAGAATATTTACAGTTAGTGCGGAAAATGGATTGGATTCAACTGCCACAATTATAGAATA
TGCAAGAGATATTGGAAGACCTAGATATGATTTATGGGAAATTCCAGTATGGGAAGAAAGTGTAAATGTTGTAGATAATG
AAATATTTTTAATGCAGGCAGTTCATCAAGAAAGCGATGTAATCCCCGAAAATATCGACTGTATAAGGTCAATGTTAAAA
ATGGAAGAAGATAATATTAAATCCATTGAAATGACAAATAAAGCTATGGGAATATTGAAATAA

Upstream 100 bases:

>100_bases
GACTGTTAATGTAGCATATACATACATAAAAAATATATGTAAAATCTACAAAACATATGATGTAAATTATGAATTATAAA
AACATAAAATAGGTGGCACA

Downstream 100 bases:

>100_bases
AATATTATTTTTAATAAATTTTTTTTATATTCTATTTTTTTATATTTATTAATTTAATTTACACAATTTTAGGGAAATTA
TGAAAACAACATATTTGGAT

Product: glyceraldehyde-3-phosphate dehydrogenase

Products: NA

Alternate protein names: GAPDH; NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MAKVLINGYGSIGKRVADAVSMQKDMEVIGVTKTRPNFEADMAVQKGYDLYSAVEGRESLFEEKGIDIQGNIFDIIEEAD
IVVDCAPGGIGKDNIENIYKKYNKKAIVQGGEKAPFVEDSFNSLWSYDRCYGKNIIRAVSCNTTGLCRTLYAINSTTDIL
KARVVLIRRGADPNDAKRGPINAIVPNPPTVPSHHGPDVGTVIPEFKDKIITSAIIVPTTLMHMHSLMVETTGTTKDDVI
DAIEKTPRIFTVSAENGLDSTATIIEYARDIGRPRYDLWEIPVWEESVNVVDNEIFLMQAVHQESDVIPENIDCIRSMLK
MEEDNIKSIEMTNKAMGILK

Sequences:

>Translated_340_residues
MAKVLINGYGSIGKRVADAVSMQKDMEVIGVTKTRPNFEADMAVQKGYDLYSAVEGRESLFEEKGIDIQGNIFDIIEEAD
IVVDCAPGGIGKDNIENIYKKYNKKAIVQGGEKAPFVEDSFNSLWSYDRCYGKNIIRAVSCNTTGLCRTLYAINSTTDIL
KARVVLIRRGADPNDAKRGPINAIVPNPPTVPSHHGPDVGTVIPEFKDKIITSAIIVPTTLMHMHSLMVETTGTTKDDVI
DAIEKTPRIFTVSAENGLDSTATIIEYARDIGRPRYDLWEIPVWEESVNVVDNEIFLMQAVHQESDVIPENIDCIRSMLK
MEEDNIKSIEMTNKAMGILK
>Mature_339_residues
AKVLINGYGSIGKRVADAVSMQKDMEVIGVTKTRPNFEADMAVQKGYDLYSAVEGRESLFEEKGIDIQGNIFDIIEEADI
VVDCAPGGIGKDNIENIYKKYNKKAIVQGGEKAPFVEDSFNSLWSYDRCYGKNIIRAVSCNTTGLCRTLYAINSTTDILK
ARVVLIRRGADPNDAKRGPINAIVPNPPTVPSHHGPDVGTVIPEFKDKIITSAIIVPTTLMHMHSLMVETTGTTKDDVID
AIEKTPRIFTVSAENGLDSTATIIEYARDIGRPRYDLWEIPVWEESVNVVDNEIFLMQAVHQESDVIPENIDCIRSMLKM
EEDNIKSIEMTNKAMGILK

Specific function: Unknown

COG id: COG0057

COG function: function code G; Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glyceraldehyde-3-phosphate dehydrogenase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): G3P_META3 (A6UUN9)

Other databases:

- EMBL:   CP000743
- RefSeq:   YP_001324823.1
- ProteinModelPortal:   A6UUN9
- SMR:   A6UUN9
- STRING:   A6UUN9
- GeneID:   5327230
- GenomeReviews:   CP000743_GR
- KEGG:   mae:Maeo_0627
- eggNOG:   arNOG04694
- HOGENOM:   HBG392099
- OMA:   HHGPDVQ
- ProtClustDB:   PRK04207
- BioCyc:   MAEO419665:MAEO_0627-MONOMER
- GO:   GO:0005737
- GO:   GO:0006096
- HAMAP:   MF_00559
- InterPro:   IPR020831
- InterPro:   IPR020830
- InterPro:   IPR020829
- InterPro:   IPR020828
- InterPro:   IPR006436
- InterPro:   IPR016040
- Gene3D:   G3DSA:3.40.50.720
- PIRSF:   PIRSF000149
- SMART:   SM00846
- TIGRFAMs:   TIGR01546

Pfam domain/function: PF02800 Gp_dh_C; PF00044 Gp_dh_N

EC number: =1.2.1.59

Molecular weight: Translated: 37688; Mature: 37556

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS00071 GAPDH

Important sites: ACT_SITE 141-141 BINDING 111-111 BINDING 169-169 BINDING 303-303

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKVLINGYGSIGKRVADAVSMQKDMEVIGVTKTRPNFEADMAVQKGYDLYSAVEGRESL
CCEEEEECCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHHH
FEEKGIDIQGNIFDIIEEADIVVDCAPGGIGKDNIENIYKKYNKKAIVQGGEKAPFVEDS
HHHCCCCCCCCHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCHHEECCCCCCCCHHHH
FNSLWSYDRCYGKNIIRAVSCNTTGLCRTLYAINSTTDILKARVVLIRRGADPNDAKRGP
HHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHEEECCCCCCCCCCCC
INAIVPNPPTVPSHHGPDVGTVIPEFKDKIITSAIIVPTTLMHMHSLMVETTGTTKDDVI
CEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
DAIEKTPRIFTVSAENGLDSTATIIEYARDIGRPRYDLWEIPVWEESVNVVDNEIFLMQA
HHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHH
VHQESDVIPENIDCIRSMLKMEEDNIKSIEMTNKAMGILK
HHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEHHHHHCCCC
>Mature Secondary Structure 
AKVLINGYGSIGKRVADAVSMQKDMEVIGVTKTRPNFEADMAVQKGYDLYSAVEGRESL
CEEEEECCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHHH
FEEKGIDIQGNIFDIIEEADIVVDCAPGGIGKDNIENIYKKYNKKAIVQGGEKAPFVEDS
HHHCCCCCCCCHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCHHEECCCCCCCCHHHH
FNSLWSYDRCYGKNIIRAVSCNTTGLCRTLYAINSTTDILKARVVLIRRGADPNDAKRGP
HHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHEEECCCCCCCCCCCC
INAIVPNPPTVPSHHGPDVGTVIPEFKDKIITSAIIVPTTLMHMHSLMVETTGTTKDDVI
CEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
DAIEKTPRIFTVSAENGLDSTATIIEYARDIGRPRYDLWEIPVWEESVNVVDNEIFLMQA
HHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHH
VHQESDVIPENIDCIRSMLKMEEDNIKSIEMTNKAMGILK
HHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA