| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is gap
Identifier: 150401057
GI number: 150401057
Start: 646396
End: 647418
Strand: Direct
Name: gap
Synonym: Maeo_0627
Alternate gene names: 150401057
Gene position: 646396-647418 (Clockwise)
Preceding gene: 150401054
Following gene: 150401058
Centisome position: 41.18
GC content: 34.6
Gene sequence:
>1023_bases ATGGCAAAAGTCTTAATAAATGGATATGGTTCAATCGGAAAAAGAGTAGCTGATGCTGTATCAATGCAAAAAGATATGGA AGTAATAGGAGTTACAAAAACAAGACCGAACTTTGAAGCCGATATGGCAGTTCAAAAAGGATATGATTTATACAGTGCAG TTGAAGGTAGAGAATCATTATTTGAGGAAAAAGGAATAGATATTCAAGGAAATATATTTGATATTATTGAGGAGGCAGAT ATTGTTGTAGATTGTGCCCCGGGAGGAATTGGTAAAGATAATATCGAAAATATTTACAAAAAATACAACAAAAAGGCAAT AGTCCAAGGAGGGGAAAAAGCACCATTTGTAGAGGATAGCTTTAACTCGTTATGGAGCTATGATAGATGCTATGGTAAAA ATATTATTAGGGCAGTATCTTGTAATACCACAGGATTATGTAGGACGCTATATGCCATAAACTCCACAACAGACATATTA AAGGCAAGAGTTGTATTAATTAGAAGAGGAGCTGACCCGAACGATGCAAAAAGAGGACCTATTAATGCAATAGTGCCAAA TCCTCCAACAGTTCCATCTCACCACGGACCAGATGTAGGAACAGTAATTCCAGAATTCAAGGATAAAATAATTACTTCGG CAATAATTGTTCCTACTACGCTAATGCATATGCACTCTTTAATGGTTGAAACCACTGGAACAACCAAAGACGATGTTATT GATGCCATCGAAAAAACTCCAAGAATATTTACAGTTAGTGCGGAAAATGGATTGGATTCAACTGCCACAATTATAGAATA TGCAAGAGATATTGGAAGACCTAGATATGATTTATGGGAAATTCCAGTATGGGAAGAAAGTGTAAATGTTGTAGATAATG AAATATTTTTAATGCAGGCAGTTCATCAAGAAAGCGATGTAATCCCCGAAAATATCGACTGTATAAGGTCAATGTTAAAA ATGGAAGAAGATAATATTAAATCCATTGAAATGACAAATAAAGCTATGGGAATATTGAAATAA
Upstream 100 bases:
>100_bases GACTGTTAATGTAGCATATACATACATAAAAAATATATGTAAAATCTACAAAACATATGATGTAAATTATGAATTATAAA AACATAAAATAGGTGGCACA
Downstream 100 bases:
>100_bases AATATTATTTTTAATAAATTTTTTTTATATTCTATTTTTTTATATTTATTAATTTAATTTACACAATTTTAGGGAAATTA TGAAAACAACATATTTGGAT
Product: glyceraldehyde-3-phosphate dehydrogenase
Products: NA
Alternate protein names: GAPDH; NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MAKVLINGYGSIGKRVADAVSMQKDMEVIGVTKTRPNFEADMAVQKGYDLYSAVEGRESLFEEKGIDIQGNIFDIIEEAD IVVDCAPGGIGKDNIENIYKKYNKKAIVQGGEKAPFVEDSFNSLWSYDRCYGKNIIRAVSCNTTGLCRTLYAINSTTDIL KARVVLIRRGADPNDAKRGPINAIVPNPPTVPSHHGPDVGTVIPEFKDKIITSAIIVPTTLMHMHSLMVETTGTTKDDVI DAIEKTPRIFTVSAENGLDSTATIIEYARDIGRPRYDLWEIPVWEESVNVVDNEIFLMQAVHQESDVIPENIDCIRSMLK MEEDNIKSIEMTNKAMGILK
Sequences:
>Translated_340_residues MAKVLINGYGSIGKRVADAVSMQKDMEVIGVTKTRPNFEADMAVQKGYDLYSAVEGRESLFEEKGIDIQGNIFDIIEEAD IVVDCAPGGIGKDNIENIYKKYNKKAIVQGGEKAPFVEDSFNSLWSYDRCYGKNIIRAVSCNTTGLCRTLYAINSTTDIL KARVVLIRRGADPNDAKRGPINAIVPNPPTVPSHHGPDVGTVIPEFKDKIITSAIIVPTTLMHMHSLMVETTGTTKDDVI DAIEKTPRIFTVSAENGLDSTATIIEYARDIGRPRYDLWEIPVWEESVNVVDNEIFLMQAVHQESDVIPENIDCIRSMLK MEEDNIKSIEMTNKAMGILK >Mature_339_residues AKVLINGYGSIGKRVADAVSMQKDMEVIGVTKTRPNFEADMAVQKGYDLYSAVEGRESLFEEKGIDIQGNIFDIIEEADI VVDCAPGGIGKDNIENIYKKYNKKAIVQGGEKAPFVEDSFNSLWSYDRCYGKNIIRAVSCNTTGLCRTLYAINSTTDILK ARVVLIRRGADPNDAKRGPINAIVPNPPTVPSHHGPDVGTVIPEFKDKIITSAIIVPTTLMHMHSLMVETTGTTKDDVID AIEKTPRIFTVSAENGLDSTATIIEYARDIGRPRYDLWEIPVWEESVNVVDNEIFLMQAVHQESDVIPENIDCIRSMLKM EEDNIKSIEMTNKAMGILK
Specific function: Unknown
COG id: COG0057
COG function: function code G; Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glyceraldehyde-3-phosphate dehydrogenase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): G3P_META3 (A6UUN9)
Other databases:
- EMBL: CP000743 - RefSeq: YP_001324823.1 - ProteinModelPortal: A6UUN9 - SMR: A6UUN9 - STRING: A6UUN9 - GeneID: 5327230 - GenomeReviews: CP000743_GR - KEGG: mae:Maeo_0627 - eggNOG: arNOG04694 - HOGENOM: HBG392099 - OMA: HHGPDVQ - ProtClustDB: PRK04207 - BioCyc: MAEO419665:MAEO_0627-MONOMER - GO: GO:0005737 - GO: GO:0006096 - HAMAP: MF_00559 - InterPro: IPR020831 - InterPro: IPR020830 - InterPro: IPR020829 - InterPro: IPR020828 - InterPro: IPR006436 - InterPro: IPR016040 - Gene3D: G3DSA:3.40.50.720 - PIRSF: PIRSF000149 - SMART: SM00846 - TIGRFAMs: TIGR01546
Pfam domain/function: PF02800 Gp_dh_C; PF00044 Gp_dh_N
EC number: =1.2.1.59
Molecular weight: Translated: 37688; Mature: 37556
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00071 GAPDH
Important sites: ACT_SITE 141-141 BINDING 111-111 BINDING 169-169 BINDING 303-303
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVLINGYGSIGKRVADAVSMQKDMEVIGVTKTRPNFEADMAVQKGYDLYSAVEGRESL CCEEEEECCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHHH FEEKGIDIQGNIFDIIEEADIVVDCAPGGIGKDNIENIYKKYNKKAIVQGGEKAPFVEDS HHHCCCCCCCCHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCHHEECCCCCCCCHHHH FNSLWSYDRCYGKNIIRAVSCNTTGLCRTLYAINSTTDILKARVVLIRRGADPNDAKRGP HHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHEEECCCCCCCCCCCC INAIVPNPPTVPSHHGPDVGTVIPEFKDKIITSAIIVPTTLMHMHSLMVETTGTTKDDVI CEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH DAIEKTPRIFTVSAENGLDSTATIIEYARDIGRPRYDLWEIPVWEESVNVVDNEIFLMQA HHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHH VHQESDVIPENIDCIRSMLKMEEDNIKSIEMTNKAMGILK HHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEHHHHHCCCC >Mature Secondary Structure AKVLINGYGSIGKRVADAVSMQKDMEVIGVTKTRPNFEADMAVQKGYDLYSAVEGRESL CEEEEECCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHHH FEEKGIDIQGNIFDIIEEADIVVDCAPGGIGKDNIENIYKKYNKKAIVQGGEKAPFVEDS HHHCCCCCCCCHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCHHEECCCCCCCCHHHH FNSLWSYDRCYGKNIIRAVSCNTTGLCRTLYAINSTTDILKARVVLIRRGADPNDAKRGP HHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHEEECCCCCCCCCCCC INAIVPNPPTVPSHHGPDVGTVIPEFKDKIITSAIIVPTTLMHMHSLMVETTGTTKDDVI CEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH DAIEKTPRIFTVSAENGLDSTATIIEYARDIGRPRYDLWEIPVWEESVNVVDNEIFLMQA HHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHH VHQESDVIPENIDCIRSMLKMEEDNIKSIEMTNKAMGILK HHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA