| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is mtbA [H]
Identifier: 150401029
GI number: 150401029
Start: 612672
End: 613679
Strand: Direct
Name: mtbA [H]
Synonym: Maeo_0598
Alternate gene names: 150401029
Gene position: 612672-613679 (Clockwise)
Preceding gene: 150401028
Following gene: 150401030
Centisome position: 39.04
GC content: 36.01
Gene sequence:
>1008_bases ATGACTCCAAAAGAAAGACTTTTAGGGGCAATTACTGGAAGCGGTATTGATAGAATACCTGCGGCCCCACTTATTGGAAA CTTTGCTGGAAGAATGGCAGGGTATACCGTAAATGAAATTGCAAAAGATGGAACTAAATTGGCTAAATCCTTAGAATACA CATACAACATGATTAAACCAGATTTGGTAACAATATTAACGGATTTAAGTATAGAAGCTGAGGCCATGGGTTGTGAATTG GAGTATTTTGATAATGATGTCCCAGTAGTTAAAAGGCATGTATCACTCGATGAGATATCCATTCCGAATCCTGAAAAAGA CGGAAGAATGCCCGAATTTTTAAAATGTATTGAGCATCTTGTGGAAAAAATTGGAAATGAAGTATTTATTGGAATGTGTG TCCCAGGACCATTTACAATAACGGGAAATGTTCACGGAGCAGAGAGTATGATGATGGATTTGGTAATGAATCCAGATGTT GTTAAAGAGGAAATAAAACTGGCAACAGAAACCTCAAAATTATTTATAAATGCATGCATGGATAGGGGAGCGATACCTTT AATTTGTGATCCAATAGCATCTGGTTCATTAATAAGCCCGAAATTTTATGAGGAGTTTGCACTAAATCCCTCCAAAGAGA TTGTAGATGAAATACACAAACGTGGATTACCAGCAGTATTGCATATTTGTGGGGACTCAAATCCAATACATGACCTTATG GCTGAAACCGGGGCAGATTTTTTAAGTGTTGATGCCAATGTTAATTTAAAAGAAATGAAAGAGAAAGTAGGTAAAAAAGT AGGTATAATTGGAAATATAGATCCTGGAAGCACCATATACCTTGGAAGTAAGGAAGAAGTCATTAATGAATGCAAAAAGG CAATAGAATACGCATCAGACAATCCAAAAGGATTTATTCTTGCATCGGGTTGTGAAATACCATTAGAATCTAAGAAAGAA AATGTAAAGGCAATAGTTGAAGCATCAGAAGTCTATGGAAAAATCTAG
Upstream 100 bases:
>100_bases TAGGTGCAGATGCATATACTGAAAATGCTAACGAAGCGTTAAATGTTGCCAAAGAACTCTATAAAAAACGAAATAATGGA CAATAAATAGGTGAAAAAAA
Downstream 100 bases:
>100_bases TAAAAATCCGATAAATATTAAGATGTTATTTAACAATACCAACAATTTTAACCATATTTTTTTAAAGATGGATTGGGTGT TTTTATGACGCCAAAAGAAA
Product: uroporphyrinogen decarboxylase
Products: CO2; Coproporphyrinogen III [C]
Alternate protein names: MT2-A; Methylcobamide:CoM methyltransferase II isozyme A [H]
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MTPKERLLGAITGSGIDRIPAAPLIGNFAGRMAGYTVNEIAKDGTKLAKSLEYTYNMIKPDLVTILTDLSIEAEAMGCEL EYFDNDVPVVKRHVSLDEISIPNPEKDGRMPEFLKCIEHLVEKIGNEVFIGMCVPGPFTITGNVHGAESMMMDLVMNPDV VKEEIKLATETSKLFINACMDRGAIPLICDPIASGSLISPKFYEEFALNPSKEIVDEIHKRGLPAVLHICGDSNPIHDLM AETGADFLSVDANVNLKEMKEKVGKKVGIIGNIDPGSTIYLGSKEEVINECKKAIEYASDNPKGFILASGCEIPLESKKE NVKAIVEASEVYGKI
Sequences:
>Translated_335_residues MTPKERLLGAITGSGIDRIPAAPLIGNFAGRMAGYTVNEIAKDGTKLAKSLEYTYNMIKPDLVTILTDLSIEAEAMGCEL EYFDNDVPVVKRHVSLDEISIPNPEKDGRMPEFLKCIEHLVEKIGNEVFIGMCVPGPFTITGNVHGAESMMMDLVMNPDV VKEEIKLATETSKLFINACMDRGAIPLICDPIASGSLISPKFYEEFALNPSKEIVDEIHKRGLPAVLHICGDSNPIHDLM AETGADFLSVDANVNLKEMKEKVGKKVGIIGNIDPGSTIYLGSKEEVINECKKAIEYASDNPKGFILASGCEIPLESKKE NVKAIVEASEVYGKI >Mature_334_residues TPKERLLGAITGSGIDRIPAAPLIGNFAGRMAGYTVNEIAKDGTKLAKSLEYTYNMIKPDLVTILTDLSIEAEAMGCELE YFDNDVPVVKRHVSLDEISIPNPEKDGRMPEFLKCIEHLVEKIGNEVFIGMCVPGPFTITGNVHGAESMMMDLVMNPDVV KEEIKLATETSKLFINACMDRGAIPLICDPIASGSLISPKFYEEFALNPSKEIVDEIHKRGLPAVLHICGDSNPIHDLMA ETGADFLSVDANVNLKEMKEKVGKKVGIIGNIDPGSTIYLGSKEEVINECKKAIEYASDNPKGFILASGCEIPLESKKEN VKAIVEASEVYGKI
Specific function: Catalyzes the transfer of the methyl group from the methylated corrinoid cofactor of mtmC, mtbC and mttC to coenzyme M [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the uroporphyrinogen decarboxylase family. MtbA/mtaA subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006360 - InterPro: IPR000257 [H]
Pfam domain/function: PF01208 URO-D [H]
EC number: 4.1.1.37 [C]
Molecular weight: Translated: 36446; Mature: 36314
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPKERLLGAITGSGIDRIPAAPLIGNFAGRMAGYTVNEIAKDGTKLAKSLEYTYNMIKP CCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCH DLVTILTDLSIEAEAMGCELEYFDNDVPVVKRHVSLDEISIPNPEKDGRMPEFLKCIEHL HHHHHHHCCCEEHHHHCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH VEKIGNEVFIGMCVPGPFTITGNVHGAESMMMDLVMNPDVVKEEIKLATETSKLFINACM HHHCCCEEEEEEECCCCEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH DRGAIPLICDPIASGSLISPKFYEEFALNPSKEIVDEIHKRGLPAVLHICGDSNPIHDLM CCCCCCEEECCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHH AETGADFLSVDANVNLKEMKEKVGKKVGIIGNIDPGSTIYLGSKEEVINECKKAIEYASD HHCCCCEEEECCCCCHHHHHHHHCCCCCEEECCCCCCEEEECCHHHHHHHHHHHHHHCCC NPKGFILASGCEIPLESKKENVKAIVEASEVYGKI CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure TPKERLLGAITGSGIDRIPAAPLIGNFAGRMAGYTVNEIAKDGTKLAKSLEYTYNMIKP CCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCH DLVTILTDLSIEAEAMGCELEYFDNDVPVVKRHVSLDEISIPNPEKDGRMPEFLKCIEHL HHHHHHHCCCEEHHHHCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH VEKIGNEVFIGMCVPGPFTITGNVHGAESMMMDLVMNPDVVKEEIKLATETSKLFINACM HHHCCCEEEEEEECCCCEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH DRGAIPLICDPIASGSLISPKFYEEFALNPSKEIVDEIHKRGLPAVLHICGDSNPIHDLM CCCCCCEEECCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHH AETGADFLSVDANVNLKEMKEKVGKKVGIIGNIDPGSTIYLGSKEEVINECKKAIEYASD HHCCCCEEEECCCCCHHHHHHHHCCCCCEEECCCCCCEEEECCHHHHHHHHHHHHHHCCC NPKGFILASGCEIPLESKKENVKAIVEASEVYGKI CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: Reducing agents [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.00085 {7-COOH-porphyrinogen} 0.00035 {7-COOH-porphyrinogen} 0.00231 {7-COOH,} 0.00533 {uroporphyrinogen} 0.00256 {uroporphyrinogen} 0.00133 {uroporphyrinogen} 0.001 {uroporphyrinogen} 0.0008 {uroporphyrinogen} 0.0004 {uroporphyrino
Substrates: H+; Uroporphyrinogen III [C]
Specific reaction: (4) H+ + Uroporphyrinogen III --> (4) CO2 + Coproporphyrinogen III [C]
General reaction: Decarboxylation [C]
Inhibitor: 5, 5'-Dithiobis (2-nitrobenzoate); 7-COOH-porphyrinogenI; 7-COOH-porphyrinogen III; Butanedione; Diethyl dicarbonate; Fe2+; Iodoacetamide; p-Hydroxy mercuribenzoate; Phenyl glyoxal; Pt2+; Sn2+; UroporphyrinogenI uroporphyrinogen III; Uroporphyrinogen III;
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]