| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401030
Identifier: 150401030
GI number: 150401030
Start: 613764
End: 614567
Strand: Direct
Name: 150401030
Synonym: Maeo_0599
Alternate gene names: NA
Gene position: 613764-614567 (Clockwise)
Preceding gene: 150401029
Following gene: 150401031
Centisome position: 39.11
GC content: 30.22
Gene sequence:
>804_bases ATGACGCCAAAAGAAAGAATTGATAGTGTCCTTGATGGGGGGACCAATATTCCCTCCGTCCCAATAATAAGCCCATATTT TTTAAATCTTTCATTAAACAAAGACAAAGAACTGTTTAATTTTCATTTAAATTTATATGAGAGATATAAACCAGATTTAA TCACATTAATACATGAAAATGTAAGTTTAGAAATTGAAACTTTAAAAATACTGGGAAGGAAAATAAAAGATACATATATA ACTGTTGCTTTGGACTGTCCAATATCTTACCTATCTGCAATTGACGATAACTTCATGATAAATCTTTATTTAAAAAAAGA AGAAATTCATTCAAAAATGGACAATTATGTGGAATATCTCAAAGAAAATATTGGAATAATTATAGAAAATGAAGGAATTC CATTTTTAGGAGACCCCACTGCTCCATTCATTGGACCAAAGATGTATGAAGAGTTTGGAATACCCTATTTAAAAAAAATA TTTAGATTTATAAAATCTTACGGAGCTCCGGTATTTTTACATATATGTGGCGAATTAACTCCAATTATTGACCAGTTGAA AAAATTGGATATCGATGTTTTAAGTTTTGAAGATAGTTTGGGTGTTGTAGGAGCTCTTGACTGTGTATTGATGGGAAATA TAAAGCCTAAGGATATGCTGAATGATTGCATAGACTCTAAAATAAATCAGGTTATAAAAAATAAGGGAAAACAGCACATA ATAGCGACAGGTTGTGAGTTGCTTCCCAATACTCCCGAAAAAAACATTATTAAATTAATTAACTCGAGGGTGGATTATGA TTGA
Upstream 100 bases:
>100_bases CTATGGAAAAATCTAGTAAAAATCCGATAAATATTAAGATGTTATTTAACAATACCAACAATTTTAACCATATTTTTTTA AAGATGGATTGGGTGTTTTT
Downstream 100 bases:
>100_bases CATTGAAGAAGAAGTTAAAAATAGAACTTTGATAGCACCAATGGGTGGGTGTTATATTGCAAAACTTTATGGATGCGGTA AGAAGCACCATTTTTGTAGA
Product: uroporphyrinogen-III decarboxylase-like protein
Products: NA
Alternate protein names: Uroporphyrinogen-III Decarboxylase-Like Protein; MtaA/CmuA Family Methyltransferase
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MTPKERIDSVLDGGTNIPSVPIISPYFLNLSLNKDKELFNFHLNLYERYKPDLITLIHENVSLEIETLKILGRKIKDTYI TVALDCPISYLSAIDDNFMINLYLKKEEIHSKMDNYVEYLKENIGIIIENEGIPFLGDPTAPFIGPKMYEEFGIPYLKKI FRFIKSYGAPVFLHICGELTPIIDQLKKLDIDVLSFEDSLGVVGALDCVLMGNIKPKDMLNDCIDSKINQVIKNKGKQHI IATGCELLPNTPEKNIIKLINSRVDYD
Sequences:
>Translated_267_residues MTPKERIDSVLDGGTNIPSVPIISPYFLNLSLNKDKELFNFHLNLYERYKPDLITLIHENVSLEIETLKILGRKIKDTYI TVALDCPISYLSAIDDNFMINLYLKKEEIHSKMDNYVEYLKENIGIIIENEGIPFLGDPTAPFIGPKMYEEFGIPYLKKI FRFIKSYGAPVFLHICGELTPIIDQLKKLDIDVLSFEDSLGVVGALDCVLMGNIKPKDMLNDCIDSKINQVIKNKGKQHI IATGCELLPNTPEKNIIKLINSRVDYD >Mature_266_residues TPKERIDSVLDGGTNIPSVPIISPYFLNLSLNKDKELFNFHLNLYERYKPDLITLIHENVSLEIETLKILGRKIKDTYIT VALDCPISYLSAIDDNFMINLYLKKEEIHSKMDNYVEYLKENIGIIIENEGIPFLGDPTAPFIGPKMYEEFGIPYLKKIF RFIKSYGAPVFLHICGELTPIIDQLKKLDIDVLSFEDSLGVVGALDCVLMGNIKPKDMLNDCIDSKINQVIKNKGKQHII ATGCELLPNTPEKNIIKLINSRVDYD
Specific function: Unknown
COG id: COG0407
COG function: function code H; Uroporphyrinogen-III decarboxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30384; Mature: 30253
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPKERIDSVLDGGTNIPSVPIISPYFLNLSLNKDKELFNFHLNLYERYKPDLITLIHEN CCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECC VSLEIETLKILGRKIKDTYITVALDCPISYLSAIDDNFMINLYLKKEEIHSKMDNYVEYL CEEEEHHHHHHHHHHCCEEEEEEEECCHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHH KENIGIIIENEGIPFLGDPTAPFIGPKMYEEFGIPYLKKIFRFIKSYGAPVFLHICGELT HHCCCEEEECCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCEEEHHHHHHH PIIDQLKKLDIDVLSFEDSLGVVGALDCVLMGNIKPKDMLNDCIDSKINQVIKNKGKQHI HHHHHHHHCCCCEEEECCCCCHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHCCCCCEE IATGCELLPNTPEKNIIKLINSRVDYD EEECHHHCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure TPKERIDSVLDGGTNIPSVPIISPYFLNLSLNKDKELFNFHLNLYERYKPDLITLIHEN CCHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECC VSLEIETLKILGRKIKDTYITVALDCPISYLSAIDDNFMINLYLKKEEIHSKMDNYVEYL CEEEEHHHHHHHHHHCCEEEEEEEECCHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHH KENIGIIIENEGIPFLGDPTAPFIGPKMYEEFGIPYLKKIFRFIKSYGAPVFLHICGELT HHCCCEEEECCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCEEEHHHHHHH PIIDQLKKLDIDVLSFEDSLGVVGALDCVLMGNIKPKDMLNDCIDSKINQVIKNKGKQHI HHHHHHHHCCCCEEEECCCCCHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHCCCCCEE IATGCELLPNTPEKNIIKLINSRVDYD EEECHHHCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA