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The map label for this gene is ycfF [C]

Identifier: 150401027

GI number: 150401027

Start: 611304

End: 611699

Strand: Direct

Name: ycfF [C]

Synonym: Maeo_0596

Alternate gene names: 150401027

Gene position: 611304-611699 (Clockwise)

Preceding gene: 150401023

Following gene: 150401028

Centisome position: 38.95

GC content: 26.77

Gene sequence:

>396_bases
ATGTGCATATTTTGTAAAATTGTAGATGAAGAAATACCTGCAAAAATAGTTTATGAAACAAATACTACAATTGCCTTTTT
AGATGTCAATCCAAAAACCAAGGGGCACACAATTATAATACCTAAATCTCATTATGAAACTTTTGAGGAGCTCCCTGACA
ACATACTAATGGATTTAATGAAAACTATTAAAGAAGTAATAAAATTATTAAAACCATTAAATTATGAAGGATACAATATT
TTAAATAATAATAAACCAATTGCAGGTCAGGAAATTCCACATGTTCATTTTCATTTAATACCAAGATACAGCAATGAACA
GGAAGAAATTATAAAAATGTCAAAATCTATAAACTGCGATTTAGATGAAATATTATCGTGTGTTCAAAAAGATTAG

Upstream 100 bases:

>100_bases
ATTTGTGTTTCATAAAAAAATAATTATATACTATAATTACCATATCATTATTGTCTTAAATATGAATGGTAGTTTATATA
TAAATAGTTATGGTGGAAAA

Downstream 100 bases:

>100_bases
TTTTAACCGTTAGCCCATATAAACAAATGGTTTATACATATAGACCTTATTTTCTTATTTTATAATTTATACGAGATATT
AATAGCAATTATGGTTACAA

Product: histidine triad (HIT) protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MCIFCKIVDEEIPAKIVYETNTTIAFLDVNPKTKGHTIIIPKSHYETFEELPDNILMDLMKTIKEVIKLLKPLNYEGYNI
LNNNKPIAGQEIPHVHFHLIPRYSNEQEEIIKMSKSINCDLDEILSCVQKD

Sequences:

>Translated_131_residues
MCIFCKIVDEEIPAKIVYETNTTIAFLDVNPKTKGHTIIIPKSHYETFEELPDNILMDLMKTIKEVIKLLKPLNYEGYNI
LNNNKPIAGQEIPHVHFHLIPRYSNEQEEIIKMSKSINCDLDEILSCVQKD
>Mature_131_residues
MCIFCKIVDEEIPAKIVYETNTTIAFLDVNPKTKGHTIIIPKSHYETFEELPDNILMDLMKTIKEVIKLLKPLNYEGYNI
LNNNKPIAGQEIPHVHFHLIPRYSNEQEEIIKMSKSINCDLDEILSCVQKD

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI17506713, Length=102, Percent_Identity=35.2941176470588, Blast_Score=67, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6320078, Length=123, Percent_Identity=42.2764227642276, Blast_Score=102, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 15172; Mature: 15172

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCIFCKIVDEEIPAKIVYETNTTIAFLDVNPKTKGHTIIIPKSHYETFEELPDNILMDLM
CEEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCCEEEEECHHHHHHHHCCHHHHHHHH
KTIKEVIKLLKPLNYEGYNILNNNKPIAGQEIPHVHFHLIPRYSNEQEEIIKMSKSINCD
HHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCC
LDEILSCVQKD
HHHHHHHHCCC
>Mature Secondary Structure
MCIFCKIVDEEIPAKIVYETNTTIAFLDVNPKTKGHTIIIPKSHYETFEELPDNILMDLM
CEEEEEEECCCCCEEEEEECCCEEEEEECCCCCCCCEEEEECHHHHHHHHCCHHHHHHHH
KTIKEVIKLLKPLNYEGYNILNNNKPIAGQEIPHVHFHLIPRYSNEQEEIIKMSKSINCD
HHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCC
LDEILSCVQKD
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]