Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

Click here to switch to the map view.

The map label for this gene is 150400377

Identifier: 150400377

GI number: 150400377

Start: 1659224

End: 1659964

Strand: Reverse

Name: 150400377

Synonym: Mevan_1640

Alternate gene names: NA

Gene position: 1659964-1659224 (Counterclockwise)

Preceding gene: 150400378

Following gene: 150400376

Centisome position: 96.51

GC content: 27.4

Gene sequence:

>741_bases
GTGCGGAATAGTCAAACTTTAAATTTTGAACCGGAAATTATCAGTTATTTAAAAGAATTTCATTTTGAAAACTTAACAAA
AGAAAAAAACATAGTTACTATGGATTTAAACGATTTATTCCATAAATCTCCGTTAGGTAATGCCATTTTAGAATATATTA
TAAATTACCCTGATGAAGGGATTTGCCTACTTGAAAAATGTTACAATGAAGCATTTTGGGACTATAACTGTGAAAGAATA
AATATAACGGCCAGTATAAAAAATATTCCTAAAGAATTACTATCCAAAATAGAGATTCACGAAATTAATACCTGCCATGT
TGGAAAATTAATTGAAATTGACGGAAAAATTAAAAGTACAAAGAAAATTGTTTCTGGAATTACAAATTTAGCATTGACAT
GTACAACTTGTGGAAACTCGGCCATATTTAAAATTGAAAATCCTTTTGAAACCAGTTTGGAAAGAACTTGTCCAAAATGT
AGTCAAAAAATGTTTCTTATGCAGAGTGAATCTAAATACGAAGATTTTCAAGAATTAACCTTAATATCAATTAATAAAGA
GTTTTTATCAAAAAGTACTTCGAATATAGAACAAGAAATAATATTAAAAAATTCACCTGGGATATATAACGGAATTTTCC
GAATCATTGGGATCCCGTATTTAAGACCGAATAAAAAAACTGGCGTATTTGATATCATAATCAAAGGAATATATGCAGAA
AAAATTGAAGATGAAAAATAA

Upstream 100 bases:

>100_bases
ATTTTAAAATATTTTTTATTGAAATTACTCTTTTTTAAATTTAGATAATAATTAATATATAAATCGCCACTATTTTAACT
ATTATTTTTATGGTGAGAAT

Downstream 100 bases:

>100_bases
AGACTTACATAAAGAGGGGGGGGAATTTTGGGAAATAACAATATTTTAATGGAGATAAACAATCCTGAAAAAAAAGACCT
TCTTGAAAGAGAAGGATTTC

Product: MCM family DNA replication protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MRNSQTLNFEPEIISYLKEFHFENLTKEKNIVTMDLNDLFHKSPLGNAILEYIINYPDEGICLLEKCYNEAFWDYNCERI
NITASIKNIPKELLSKIEIHEINTCHVGKLIEIDGKIKSTKKIVSGITNLALTCTTCGNSAIFKIENPFETSLERTCPKC
SQKMFLMQSESKYEDFQELTLISINKEFLSKSTSNIEQEIILKNSPGIYNGIFRIIGIPYLRPNKKTGVFDIIIKGIYAE
KIEDEK

Sequences:

>Translated_246_residues
MRNSQTLNFEPEIISYLKEFHFENLTKEKNIVTMDLNDLFHKSPLGNAILEYIINYPDEGICLLEKCYNEAFWDYNCERI
NITASIKNIPKELLSKIEIHEINTCHVGKLIEIDGKIKSTKKIVSGITNLALTCTTCGNSAIFKIENPFETSLERTCPKC
SQKMFLMQSESKYEDFQELTLISINKEFLSKSTSNIEQEIILKNSPGIYNGIFRIIGIPYLRPNKKTGVFDIIIKGIYAE
KIEDEK
>Mature_246_residues
MRNSQTLNFEPEIISYLKEFHFENLTKEKNIVTMDLNDLFHKSPLGNAILEYIINYPDEGICLLEKCYNEAFWDYNCERI
NITASIKNIPKELLSKIEIHEINTCHVGKLIEIDGKIKSTKKIVSGITNLALTCTTCGNSAIFKIENPFETSLERTCPKC
SQKMFLMQSESKYEDFQELTLISINKEFLSKSTSNIEQEIILKNSPGIYNGIFRIIGIPYLRPNKKTGVFDIIIKGIYAE
KIEDEK

Specific function: Unknown

COG id: COG1241

COG function: function code L; Predicted ATPase involved in replication control, Cdc46/Mcm family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MCM domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001208
- InterPro:   IPR018525
- InterPro:   IPR008047
- InterPro:   IPR012340
- InterPro:   IPR016027 [H]

Pfam domain/function: PF00493 MCM [H]

EC number: NA

Molecular weight: Translated: 28295; Mature: 28295

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNSQTLNFEPEIISYLKEFHFENLTKEKNIVTMDLNDLFHKSPLGNAILEYIINYPDEG
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHCCCCHHHHHHHHHCCCCCC
ICLLEKCYNEAFWDYNCERINITASIKNIPKELLSKIEIHEINTCHVGKLIEIDGKIKST
HHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHH
KKIVSGITNLALTCTTCGNSAIFKIENPFETSLERTCPKCSQKMFLMQSESKYEDFQELT
HHHHHHHHHHEEEEEECCCCEEEEECCCHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHE
LISINKEFLSKSTSNIEQEIILKNSPGIYNGIFRIIGIPYLRPNKKTGVFDIIIKGIYAE
EEEECHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
KIEDEK
HCCCCC
>Mature Secondary Structure
MRNSQTLNFEPEIISYLKEFHFENLTKEKNIVTMDLNDLFHKSPLGNAILEYIINYPDEG
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHCCCCHHHHHHHHHCCCCCC
ICLLEKCYNEAFWDYNCERINITASIKNIPKELLSKIEIHEINTCHVGKLIEIDGKIKST
HHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHH
KKIVSGITNLALTCTTCGNSAIFKIENPFETSLERTCPKCSQKMFLMQSESKYEDFQELT
HHHHHHHHHHEEEEEECCCCEEEEECCCHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHE
LISINKEFLSKSTSNIEQEIILKNSPGIYNGIFRIIGIPYLRPNKKTGVFDIIIKGIYAE
EEEECHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
KIEDEK
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]