| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
Click here to switch to the map view.
The map label for this gene is 150400378
Identifier: 150400378
GI number: 150400378
Start: 1660094
End: 1661077
Strand: Reverse
Name: 150400378
Synonym: Mevan_1641
Alternate gene names: NA
Gene position: 1661077-1660094 (Counterclockwise)
Preceding gene: 150400380
Following gene: 150400377
Centisome position: 96.57
GC content: 27.85
Gene sequence:
>984_bases ATGTTCATTTTATTAGCGGATAGTGTGGGGGAGGATAATTTGGAGAAAAAATATCTTAAGTACCTTGAAGAAATTAAAAA AACAGACCTAAATGATATTTGGACCCCAAAATCTTATTGGGAAATACATTACAAGGAATCTGTTAATAATGGCAGAAATA AGGATGCTGAGGAATTTAATTATTTAATGAATAAATTATATTATTATTTTTTTGATGATGAAACATTTTTTGAAAAAAGA CTTAAAATTTTTGACGTCGTTCAAGATATAACGGGCCCCTGGAAAACTCTTGAAGATATTGAATTAAATTTGAAAAAAAT ACTCGATAACTCCGCTAAAATTTCTAAATGGTATATTTTATACTTTTTAGCAAAAAATGGAATTGGAACACTAGGAAACA CTTCAAAATCACTAGACCTGTATCATAGGGACATGTTAAAAATTGCAAAAATTATTAAAAATGAAACGGCTGAATCAGTC GTAACACCAAAATGGAGCGATTACTCCCGGGACATGGCAAAAATGTTTTCGTACCGTGAGGAATTTAAAAATTTAGAAAA CAAATATTTTGAAAAATTAAAAGATATAATCGACTCAAAAATAGAAAAAATGCCGAAAAAACCGGATCAGACCAAATACA AAAATTATTTAAAATTTATTAAAGATAATCGATTAAAATGGATGATAGAGGCACTAAAGCTGAAAAAGATATATTTTAAG GATAGTGCTGGAAAATGGGTTTTAAAAACCGCAATTTATAAGGAAGAAAGTATTCGAATTAATGAATTTATAGATATATT ATACAGTCATGAAGATATTAAAAAATACAATATAAAAATGCCATCAGGAATTGAATTTTGTAGGGAATTGTACCCAAACT CGGAACCTTATCCATATTACCAATATACGTTTATCCAATTAAATAGTGGAGAAGAAGTTGAAAATTTATTATTAAATCTT GTAGCGTTGGGATATATTGATTAA
Upstream 100 bases:
>100_bases ATATATATTTTTAAGTAATGATTTCTTTTTGTTAGTCCGGTTATGTTGTAACTTAACCAATAATATTAAATGCACCAAAA ATAAGTTTTATTAATATACA
Downstream 100 bases:
>100_bases AATACCATTTAACTACCCCAAAATAAACTATTTTAAAATATTTTTTATTGAAATTACTCTTTTTTAAATTTAGATAATAA TTAATATATAAATCGCCACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MFILLADSVGEDNLEKKYLKYLEEIKKTDLNDIWTPKSYWEIHYKESVNNGRNKDAEEFNYLMNKLYYYFFDDETFFEKR LKIFDVVQDITGPWKTLEDIELNLKKILDNSAKISKWYILYFLAKNGIGTLGNTSKSLDLYHRDMLKIAKIIKNETAESV VTPKWSDYSRDMAKMFSYREEFKNLENKYFEKLKDIIDSKIEKMPKKPDQTKYKNYLKFIKDNRLKWMIEALKLKKIYFK DSAGKWVLKTAIYKEESIRINEFIDILYSHEDIKKYNIKMPSGIEFCRELYPNSEPYPYYQYTFIQLNSGEEVENLLLNL VALGYID
Sequences:
>Translated_327_residues MFILLADSVGEDNLEKKYLKYLEEIKKTDLNDIWTPKSYWEIHYKESVNNGRNKDAEEFNYLMNKLYYYFFDDETFFEKR LKIFDVVQDITGPWKTLEDIELNLKKILDNSAKISKWYILYFLAKNGIGTLGNTSKSLDLYHRDMLKIAKIIKNETAESV VTPKWSDYSRDMAKMFSYREEFKNLENKYFEKLKDIIDSKIEKMPKKPDQTKYKNYLKFIKDNRLKWMIEALKLKKIYFK DSAGKWVLKTAIYKEESIRINEFIDILYSHEDIKKYNIKMPSGIEFCRELYPNSEPYPYYQYTFIQLNSGEEVENLLLNL VALGYID >Mature_327_residues MFILLADSVGEDNLEKKYLKYLEEIKKTDLNDIWTPKSYWEIHYKESVNNGRNKDAEEFNYLMNKLYYYFFDDETFFEKR LKIFDVVQDITGPWKTLEDIELNLKKILDNSAKISKWYILYFLAKNGIGTLGNTSKSLDLYHRDMLKIAKIIKNETAESV VTPKWSDYSRDMAKMFSYREEFKNLENKYFEKLKDIIDSKIEKMPKKPDQTKYKNYLKFIKDNRLKWMIEALKLKKIYFK DSAGKWVLKTAIYKEESIRINEFIDILYSHEDIKKYNIKMPSGIEFCRELYPNSEPYPYYQYTFIQLNSGEEVENLLLNL VALGYID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39314; Mature: 39314
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFILLADSVGEDNLEKKYLKYLEEIKKTDLNDIWTPKSYWEIHYKESVNNGRNKDAEEFN CEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEHHHCCCCCCCCHHHHH YLMNKLYYYFFDDETFFEKRLKIFDVVQDITGPWKTLEDIELNLKKILDNSAKISKWYIL HHHHHHEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHEEE YFLAKNGIGTLGNTSKSLDLYHRDMLKIAKIIKNETAESVVTPKWSDYSRDMAKMFSYRE EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHH EFKNLENKYFEKLKDIIDSKIEKMPKKPDQTKYKNYLKFIKDNRLKWMIEALKLKKIYFK HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEE DSAGKWVLKTAIYKEESIRINEFIDILYSHEDIKKYNIKMPSGIEFCRELYPNSEPYPYY CCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEE QYTFIQLNSGEEVENLLLNLVALGYID EEEEEEECCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFILLADSVGEDNLEKKYLKYLEEIKKTDLNDIWTPKSYWEIHYKESVNNGRNKDAEEFN CEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHEEEEHHHCCCCCCCCHHHHH YLMNKLYYYFFDDETFFEKRLKIFDVVQDITGPWKTLEDIELNLKKILDNSAKISKWYIL HHHHHHEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHEEE YFLAKNGIGTLGNTSKSLDLYHRDMLKIAKIIKNETAESVVTPKWSDYSRDMAKMFSYRE EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHH EFKNLENKYFEKLKDIIDSKIEKMPKKPDQTKYKNYLKFIKDNRLKWMIEALKLKKIYFK HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEE DSAGKWVLKTAIYKEESIRINEFIDILYSHEDIKKYNIKMPSGIEFCRELYPNSEPYPYY CCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCEE QYTFIQLNSGEEVENLLLNLVALGYID EEEEEEECCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA