| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399902
Identifier: 150399902
GI number: 150399902
Start: 1174696
End: 1176198
Strand: Reverse
Name: 150399902
Synonym: Mevan_1159
Alternate gene names: NA
Gene position: 1176198-1174696 (Counterclockwise)
Preceding gene: 150399908
Following gene: 150399901
Centisome position: 68.38
GC content: 31.6
Gene sequence:
>1503_bases ATGGATGTAATCGTGAACAATAACAAAAAATCTGGAAAAACTCTTAAAGATGTTATTTCAGGAGAATATTATGTAGATGG GGCAAATATTGTTATAATAAAGGAAACCCGGACTGAAACTGAAAAAGAATCAAAAAAATACCATATAAAGACCACAAAAG GCTCTTTTGTAATTGGAATAAGTGATGAAAATGAAACTGTAAACTTTTGGAATGAAAACTATAAATCCTTTGAAAATAAG CCAATCATCTGGAAAAGTGTTTCTGATGTTGCTTTTGGAAATATTGAAATAGATCTCGACATAACTAGTGAAAAGAAACA TTTTAAAAAGTGGGACGTTGTACTTAGTGTTTCCGGCCTTGATAAATCGGAAGGAAATTTAATATTTGTTCAAAGGGATA CCTCAGAAAGTTATGGGCTTAAAAATCCAAAAATAGGTATTTTAATCGGAGGTAAACGAGTTCTAAAAGCACTTACATCT AATGACTTGATTGTCTCTATTGAAAGAATTCGCGAGTCAAAAGAACATGTTAATTACCTCTTAACTACAGATTTAAATTT AAATCTTGAAGAAGGTTGGAAAATATATACCTACTGCACTGTAGAGTTTAACGGACCTTCAAAAAGTGTTGAACATGCCC TTGCAATTTTAGAGAATGGGACATTTGAAATTTCGGAAAATACAAATACGTATGTTACTGACTGTAGGCTTCAAACACTA TTAATAGATGAAGAAAATCCTGAAGAAAGAGATAGGGGCACTATTACAGTTAGAAATATCGGTAATGGTGTTGGAAAGTT ATATATCTACCAAGAAAGCCGTGTTTCATCGCTTTCACATACGGTTGTTGGAAAAATCAATAACGGTATTGAATTAATTG ACTTTTCAGATAAGGGGCGAATTTCTATAAAATCTAACCCTGAACGATTAAATGCGGTTGGAAAAACACAGAAAGAAGCT AAAATGCTATTTGAAAAGCATGGAGTATCTTTAAATATAGACGGACACGTAGATGATAATTCCATAATTGTTGAACAGAT TCCAGAATACACGATGGAAATATTAAAAAACAAGGAAGTTACTGTAAAGGGAATTTCTCCTGAAAAACTGATTTATATTA CGATATTTGATGATAAGGCACCTAATACGGCGTGGTACTTTAGAAAAACTACCGGACTTACGACCAAAAAAATTGGAGTT ATGAAGGTTTATTTTAAACATGGTGACATTTCAATGTTTGATAGAAATTCAGAATATTCAAAAGGACTTTTGCCAGAAAA TATCCCAAATACTGCTCTTGAGGGTGGAACAATTGCAGTTACCAATATGGTTAAAAAATACAAAGGGTACATTGGAATAA GAACACTGAAAAATGATAAATATGGCCCTACAGGAGAAACTTTTGAAGGAACAAACGTTGTTGGAAAAGTTGTCAAAAAT ATAGAAATATTAAAAAATATCAAACAGGGTGAAAATATATACATTTTAGAAGTTAATAAATAA
Upstream 100 bases:
>100_bases ATAGTATGTTATTTAAGTATAAAATAGTTTTGATGGTGCAGGTAAGTAAAGACCTGGTTTACTCATTTCCTATTATTTAA GCCATTAAGAGGCTGGTTAT
Downstream 100 bases:
>100_bases TTATTTTAATGTAATATATTATTTTAATATTTTAAAAGTAATTTTCTATTTTTTATTGGGAGGATTTGTTATGGATTGGA AAGAAGTTTCTCAATATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MDVIVNNNKKSGKTLKDVISGEYYVDGANIVIIKETRTETEKESKKYHIKTTKGSFVIGISDENETVNFWNENYKSFENK PIIWKSVSDVAFGNIEIDLDITSEKKHFKKWDVVLSVSGLDKSEGNLIFVQRDTSESYGLKNPKIGILIGGKRVLKALTS NDLIVSIERIRESKEHVNYLLTTDLNLNLEEGWKIYTYCTVEFNGPSKSVEHALAILENGTFEISENTNTYVTDCRLQTL LIDEENPEERDRGTITVRNIGNGVGKLYIYQESRVSSLSHTVVGKINNGIELIDFSDKGRISIKSNPERLNAVGKTQKEA KMLFEKHGVSLNIDGHVDDNSIIVEQIPEYTMEILKNKEVTVKGISPEKLIYITIFDDKAPNTAWYFRKTTGLTTKKIGV MKVYFKHGDISMFDRNSEYSKGLLPENIPNTALEGGTIAVTNMVKKYKGYIGIRTLKNDKYGPTGETFEGTNVVGKVVKN IEILKNIKQGENIYILEVNK
Sequences:
>Translated_500_residues MDVIVNNNKKSGKTLKDVISGEYYVDGANIVIIKETRTETEKESKKYHIKTTKGSFVIGISDENETVNFWNENYKSFENK PIIWKSVSDVAFGNIEIDLDITSEKKHFKKWDVVLSVSGLDKSEGNLIFVQRDTSESYGLKNPKIGILIGGKRVLKALTS NDLIVSIERIRESKEHVNYLLTTDLNLNLEEGWKIYTYCTVEFNGPSKSVEHALAILENGTFEISENTNTYVTDCRLQTL LIDEENPEERDRGTITVRNIGNGVGKLYIYQESRVSSLSHTVVGKINNGIELIDFSDKGRISIKSNPERLNAVGKTQKEA KMLFEKHGVSLNIDGHVDDNSIIVEQIPEYTMEILKNKEVTVKGISPEKLIYITIFDDKAPNTAWYFRKTTGLTTKKIGV MKVYFKHGDISMFDRNSEYSKGLLPENIPNTALEGGTIAVTNMVKKYKGYIGIRTLKNDKYGPTGETFEGTNVVGKVVKN IEILKNIKQGENIYILEVNK >Mature_500_residues MDVIVNNNKKSGKTLKDVISGEYYVDGANIVIIKETRTETEKESKKYHIKTTKGSFVIGISDENETVNFWNENYKSFENK PIIWKSVSDVAFGNIEIDLDITSEKKHFKKWDVVLSVSGLDKSEGNLIFVQRDTSESYGLKNPKIGILIGGKRVLKALTS NDLIVSIERIRESKEHVNYLLTTDLNLNLEEGWKIYTYCTVEFNGPSKSVEHALAILENGTFEISENTNTYVTDCRLQTL LIDEENPEERDRGTITVRNIGNGVGKLYIYQESRVSSLSHTVVGKINNGIELIDFSDKGRISIKSNPERLNAVGKTQKEA KMLFEKHGVSLNIDGHVDDNSIIVEQIPEYTMEILKNKEVTVKGISPEKLIYITIFDDKAPNTAWYFRKTTGLTTKKIGV MKVYFKHGDISMFDRNSEYSKGLLPENIPNTALEGGTIAVTNMVKKYKGYIGIRTLKNDKYGPTGETFEGTNVVGKVVKN IEILKNIKQGENIYILEVNK
Specific function: Unknown
COG id: COG4070
COG function: function code O; Predicted peptidyl-prolyl cis-trans isomerase (rotamase), cyclophilin family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0288 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016466 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56412; Mature: 56412
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVIVNNNKKSGKTLKDVISGEYYVDGANIVIIKETRTETEKESKKYHIKTTKGSFVIGI CCEEEECCCCCCCHHHHHHCCCEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEEE SDENETVNFWNENYKSFENKPIIWKSVSDVAFGNIEIDLDITSEKKHFKKWDVVLSVSGL CCCCCEEEECCCCHHCCCCCCEEEEECCCEEECEEEEEEEECCCHHHCEEEEEEEEEECC DKSEGNLIFVQRDTSESYGLKNPKIGILIGGKRVLKALTSNDLIVSIERIRESKEHVNYL CCCCCCEEEEECCCCCCCCCCCCEEEEEECCHHHHHHHCCCCEEEEHHHHHCCHHHCEEE LTTDLNLNLEEGWKIYTYCTVEFNGPSKSVEHALAILENGTFEISENTNTYVTDCRLQTL EEEEEECCCCCCEEEEEEEEEEECCCCHHHHHHHHEEECCCEEEECCCCEEEEEEEEEEE LIDEENPEERDRGTITVRNIGNGVGKLYIYQESRVSSLSHTVVGKINNGIELIDFSDKGR EECCCCCCCCCCCEEEEEECCCCEEEEEEEECCHHCCCCEEEEEEECCCEEEEEECCCCE ISIKSNPERLNAVGKTQKEAKMLFEKHGVSLNIDGHVDDNSIIVEQIPEYTMEILKNKEV EEECCCHHHHHHCCCCHHHHHHHHHHCCCEEEECCCCCCCCEEHHHHHHHHHHHHCCCCE TVKGISPEKLIYITIFDDKAPNTAWYFRKTTGLTTKKIGVMKVYFKHGDISMFDRNSEYS EEEECCCCEEEEEEEECCCCCCCEEEEEEECCCCEECEEEEEEEEECCCEEEEECCCCCC KGLLPENIPNTALEGGTIAVTNMVKKYKGYIGIRTLKNDKYGPTGETFEGTNVVGKVVKN CCCCCCCCCCCCCCCCEEEHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHH IEILKNIKQGENIYILEVNK HHHHHHHCCCCCEEEEEECC >Mature Secondary Structure MDVIVNNNKKSGKTLKDVISGEYYVDGANIVIIKETRTETEKESKKYHIKTTKGSFVIGI CCEEEECCCCCCCHHHHHHCCCEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCEEEEE SDENETVNFWNENYKSFENKPIIWKSVSDVAFGNIEIDLDITSEKKHFKKWDVVLSVSGL CCCCCEEEECCCCHHCCCCCCEEEEECCCEEECEEEEEEEECCCHHHCEEEEEEEEEECC DKSEGNLIFVQRDTSESYGLKNPKIGILIGGKRVLKALTSNDLIVSIERIRESKEHVNYL CCCCCCEEEEECCCCCCCCCCCCEEEEEECCHHHHHHHCCCCEEEEHHHHHCCHHHCEEE LTTDLNLNLEEGWKIYTYCTVEFNGPSKSVEHALAILENGTFEISENTNTYVTDCRLQTL EEEEEECCCCCCEEEEEEEEEEECCCCHHHHHHHHEEECCCEEEECCCCEEEEEEEEEEE LIDEENPEERDRGTITVRNIGNGVGKLYIYQESRVSSLSHTVVGKINNGIELIDFSDKGR EECCCCCCCCCCCEEEEEECCCCEEEEEEEECCHHCCCCEEEEEEECCCEEEEEECCCCE ISIKSNPERLNAVGKTQKEAKMLFEKHGVSLNIDGHVDDNSIIVEQIPEYTMEILKNKEV EEECCCHHHHHHCCCCHHHHHHHHHHCCCEEEECCCCCCCCEEHHHHHHHHHHHHCCCCE TVKGISPEKLIYITIFDDKAPNTAWYFRKTTGLTTKKIGVMKVYFKHGDISMFDRNSEYS EEEECCCCEEEEEEEECCCCCCCEEEEEEECCCCEECEEEEEEEEECCCEEEEECCCCCC KGLLPENIPNTALEGGTIAVTNMVKKYKGYIGIRTLKNDKYGPTGETFEGTNVVGKVVKN CCCCCCCCCCCCCCCCEEEHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHH IEILKNIKQGENIYILEVNK HHHHHHHCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA