| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399878
Identifier: 150399878
GI number: 150399878
Start: 1144216
End: 1144830
Strand: Reverse
Name: 150399878
Synonym: Mevan_1133
Alternate gene names: NA
Gene position: 1144830-1144216 (Counterclockwise)
Preceding gene: 150399883
Following gene: 150399877
Centisome position: 66.56
GC content: 26.02
Gene sequence:
>615_bases ATGAGTTTTATGTTGGAAGAAATTATGTGGAATAGTGAATTTATAAATTTATCTCATGAAATAACTGGTTTTTCATATCC TGGCGACCCAAAATTTGAAATAATCCAAAAAAATGTTGATAAATATTTAATTTCAAAACTAACGCTTGGTTCTCATACTT CAACACATGTTGACTATCCCTTACATGTTGGGCTTGAAAATAAAAAATTTAAAAATATTATTGGAAATGGGTTTTGCATA AATATTAAGGATTTGGATAGCTTTTTTAAAAGTAATGAAAAAAATAACGAGTTAAAATTACCTAAAATTGAAGTTTTACT CATAAATACTGGTTTTTCAAAACACTGGAATACGTTTGAATATTTTGAAATGGAAGTAAGTATTGAAAAATTCGTTCAAA AAATTATTGAAATGGAGTTAATTGCACTCGGAGTAGATTGTGCATCAATTGGAAACTTTGAAACACATAAAAACCTTCTT TCTTCAAATATTAAAATAATAGAAAATTTAAACCATTTAGAGGTTTTGGAAAATAAATTTTTTAAATTCCTTGGTTTTCC ATTAAATGTTGAAAATATTGACGGTTCACCAATGAATGCGGTTGCTCTTATTTAA
Upstream 100 bases:
>100_bases TATCTAACAATATAAATCAATATAGTTAGTATTTAATAAATTACGTATAATTATAAGATAATAGGATAATAAGATAATGG GATAATAAAATACTAATCTG
Downstream 100 bases:
>100_bases TTAAAAAATAAATTGCATAACTATGCATATAAACTATGGAAAATAAATACTATTTTTTAATTAAATAGTTATTAGATAAT TTAATATCCATTGGTAATAC
Product: cyclase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MSFMLEEIMWNSEFINLSHEITGFSYPGDPKFEIIQKNVDKYLISKLTLGSHTSTHVDYPLHVGLENKKFKNIIGNGFCI NIKDLDSFFKSNEKNNELKLPKIEVLLINTGFSKHWNTFEYFEMEVSIEKFVQKIIEMELIALGVDCASIGNFETHKNLL SSNIKIIENLNHLEVLENKFFKFLGFPLNVENIDGSPMNAVALI
Sequences:
>Translated_204_residues MSFMLEEIMWNSEFINLSHEITGFSYPGDPKFEIIQKNVDKYLISKLTLGSHTSTHVDYPLHVGLENKKFKNIIGNGFCI NIKDLDSFFKSNEKNNELKLPKIEVLLINTGFSKHWNTFEYFEMEVSIEKFVQKIIEMELIALGVDCASIGNFETHKNLL SSNIKIIENLNHLEVLENKFFKFLGFPLNVENIDGSPMNAVALI >Mature_203_residues SFMLEEIMWNSEFINLSHEITGFSYPGDPKFEIIQKNVDKYLISKLTLGSHTSTHVDYPLHVGLENKKFKNIIGNGFCIN IKDLDSFFKSNEKNNELKLPKIEVLLINTGFSKHWNTFEYFEMEVSIEKFVQKIIEMELIALGVDCASIGNFETHKNLLS SNIKIIENLNHLEVLENKFFKFLGFPLNVENIDGSPMNAVALI
Specific function: Unknown
COG id: COG1878
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007325 [H]
Pfam domain/function: PF04199 Cyclase [H]
EC number: NA
Molecular weight: Translated: 23453; Mature: 23322
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFMLEEIMWNSEFINLSHEITGFSYPGDPKFEIIQKNVDKYLISKLTLGSHTSTHVDYP CCHHHHHHHCCCCEEECEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEECCE LHVGLENKKFKNIIGNGFCINIKDLDSFFKSNEKNNELKLPKIEVLLINTGFSKHWNTFE EEECCCCCHHHHHCCCCEEEEHHHHHHHHHCCCCCCCEECCEEEEEEEECCCCCCCCCEE YFEMEVSIEKFVQKIIEMELIALGVDCASIGNFETHKNLLSSNIKIIENLNHLEVLENKF EEEEEECHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHCCHHEECCCHHHHHHHHHH FKFLGFPLNVENIDGSPMNAVALI HHHHCCCCEECCCCCCCCCEEEEC >Mature Secondary Structure SFMLEEIMWNSEFINLSHEITGFSYPGDPKFEIIQKNVDKYLISKLTLGSHTSTHVDYP CHHHHHHHCCCCEEECEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEECCE LHVGLENKKFKNIIGNGFCINIKDLDSFFKSNEKNNELKLPKIEVLLINTGFSKHWNTFE EEECCCCCHHHHHCCCCEEEEHHHHHHHHHCCCCCCCEECCEEEEEEEECCCCCCCCCEE YFEMEVSIEKFVQKIIEMELIALGVDCASIGNFETHKNLLSSNIKIIENLNHLEVLENKF EEEEEECHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHCCHHEECCCHHHHHHHHHH FKFLGFPLNVENIDGSPMNAVALI HHHHCCCCEECCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]