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The map label for this gene is tfx

Identifier: 150399843

GI number: 150399843

Start: 1112710

End: 1113138

Strand: Reverse

Name: tfx

Synonym: Mevan_1098

Alternate gene names: NA

Gene position: 1113138-1112710 (Counterclockwise)

Preceding gene: 150399844

Following gene: 150399842

Centisome position: 64.72

GC content: 31.47

Gene sequence:

>429_bases
ATGGAGTCATTTTTAACAGAAATACAGATAAGGGTTTTAAATCTGAGAAAAAAGGGACATACTCAGGAAGAAATTGCCCA
TGTGATGGGGACGAGTAGAGCAAACATTAGCATGGTCGAAAAAAGGGCTCGTGAAAATATTGAAAAGGCTAAAAATACCC
TAAATATATATAATGATATTATTGCACCTTCAAAAATTAAAGTAGAAAAGGGTACCGATGTATTTAACATACCTAACGTT
ATATTTTCAAAATCAGACGAAGAAGAAATCCATGTAAATTATTCCTCCCTTCAGATAATGGAATTTATTAATCAAAATGC
AAAAAGGTACATAAAAAACCGAATGGTAGTAGAACCTTTTATTATTACAATACTTCAAAATGGGGAAATTTACGTCCACG
ATTTTGAGGAAGAAAAGGCTAAAAATTGA

Upstream 100 bases:

>100_bases
AGTCTCTTTCATTGATTTAATTTAATATTTATAGTTAAAGTTACTTAATTTATATACTGATTTAAAAATAATATATGGTA
TAATATAAAAAAGTGGAATT

Downstream 100 bases:

>100_bases
GATAAAATGAAGATAATTCAAGAAATACCTGAAAAAAATATTATAAAAGTTATGCCTGAAAATCTGGATGATTTATGGCA
TTTATCACATATTGTTCAAG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MESFLTEIQIRVLNLRKKGHTQEEIAHVMGTSRANISMVEKRARENIEKAKNTLNIYNDIIAPSKIKVEKGTDVFNIPNV
IFSKSDEEEIHVNYSSLQIMEFINQNAKRYIKNRMVVEPFIITILQNGEIYVHDFEEEKAKN

Sequences:

>Translated_142_residues
MESFLTEIQIRVLNLRKKGHTQEEIAHVMGTSRANISMVEKRARENIEKAKNTLNIYNDIIAPSKIKVEKGTDVFNIPNV
IFSKSDEEEIHVNYSSLQIMEFINQNAKRYIKNRMVVEPFIITILQNGEIYVHDFEEEKAKN
>Mature_142_residues
MESFLTEIQIRVLNLRKKGHTQEEIAHVMGTSRANISMVEKRARENIEKAKNTLNIYNDIIAPSKIKVEKGTDVFNIPNV
IFSKSDEEEIHVNYSSLQIMEFINQNAKRYIKNRMVVEPFIITILQNGEIYVHDFEEEKAKN

Specific function: Putative transcriptional regulator

COG id: COG1356

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tfx family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1098_METVS (A6UR76)

Other databases:

- EMBL:   CP000742
- RefSeq:   YP_001323610.1
- ProteinModelPortal:   A6UR76
- SMR:   A6UR76
- STRING:   A6UR76
- GeneID:   5324537
- GenomeReviews:   CP000742_GR
- KEGG:   mvn:Mevan_1098
- eggNOG:   arNOG11686
- HOGENOM:   HBG554975
- OMA:   WEQINSK
- ProtClustDB:   PRK03975
- HAMAP:   MF_00620
- InterPro:   IPR007630
- InterPro:   IPR004645
- InterPro:   IPR018384
- Gene3D:   G3DSA:3.30.1190.10
- PIRSF:   PIRSF004932
- TIGRFAMs:   TIGR00721

Pfam domain/function: PF04545 Sigma70_r4; SSF89915 Tfx_DNA-bd

EC number: NA

Molecular weight: Translated: 16552; Mature: 16552

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESFLTEIQIRVLNLRKKGHTQEEIAHVMGTSRANISMVEKRARENIEKAKNTLNIYNDI
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IAPSKIKVEKGTDVFNIPNVIFSKSDEEEIHVNYSSLQIMEFINQNAKRYIKNRMVVEPF
CCCCEEEEECCCCEEECCHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHH
IITILQNGEIYVHDFEEEKAKN
EEEEEECCCEEEEECCCCCCCC
>Mature Secondary Structure
MESFLTEIQIRVLNLRKKGHTQEEIAHVMGTSRANISMVEKRARENIEKAKNTLNIYNDI
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IAPSKIKVEKGTDVFNIPNVIFSKSDEEEIHVNYSSLQIMEFINQNAKRYIKNRMVVEPF
CCCCEEEEECCCCEEECCHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHH
IITILQNGEIYVHDFEEEKAKN
EEEEEECCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA