Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is 150399649

Identifier: 150399649

GI number: 150399649

Start: 919094

End: 919471

Strand: Reverse

Name: 150399649

Synonym: Mevan_0899

Alternate gene names: NA

Gene position: 919471-919094 (Counterclockwise)

Preceding gene: 150399650

Following gene: 150399642

Centisome position: 53.46

GC content: 31.75

Gene sequence:

>378_bases
TTGTATGGCGTTGGAACTTTTTTTGCAAAAATAGTATCAAATGAGGATCCTTACTTACAGTGGATACTTGTAAATATTGT
TGGAATTATACTCTGTTTTTTAATATTTGGGGGAAAATTTAACACTTTAATCGAGTATCCTACTAAAGTTTTAGTTTACG
GAATACTTGCAGCGATTTTAGTTATTTTAGGCACTTTTGTACTATATTATGGGTTAAATCGGGGAAAAGCAAGTGTTGTA
GTACCAATATCGTCAATTGGGCCTGCAATAACAACAATTCTGGCAGTAATTTTTTTAAAAGAGCATCTTTCATCACAGCA
GATTTTTGGAATAGCAATGATATTAGGTGGAATTATACTACTTTCAATAAGCAGCTAA

Upstream 100 bases:

>100_bases
AAGGGCAATAAACATTTAATTTTACTTTATTTTACTTAATTTTTTAATATTTTAGGGTGATTTTATCGAAAGCATTCTAA
TAGGGTTACTTGCTGCACTT

Downstream 100 bases:

>100_bases
TATATAAAAAATAGAATTAAGTAAAAAAAGTTAAATAAATTAAATTCCGAGGTATTTTTTAGCCCCTTGGGATCCGATTT
GTAACTTTATTGCACTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MYGVGTFFAKIVSNEDPYLQWILVNIVGIILCFLIFGGKFNTLIEYPTKVLVYGILAAILVILGTFVLYYGLNRGKASVV
VPISSIGPAITTILAVIFLKEHLSSQQIFGIAMILGGIILLSISS

Sequences:

>Translated_125_residues
MYGVGTFFAKIVSNEDPYLQWILVNIVGIILCFLIFGGKFNTLIEYPTKVLVYGILAAILVILGTFVLYYGLNRGKASVV
VPISSIGPAITTILAVIFLKEHLSSQQIFGIAMILGGIILLSISS
>Mature_125_residues
MYGVGTFFAKIVSNEDPYLQWILVNIVGIILCFLIFGGKFNTLIEYPTKVLVYGILAAILVILGTFVLYYGLNRGKASVV
VPISSIGPAITTILAVIFLKEHLSSQQIFGIAMILGGIILLSISS

Specific function: Unknown

COG id: COG2510

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 13512; Mature: 13512

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: PS00878 ODR_DC_2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYGVGTFFAKIVSNEDPYLQWILVNIVGIILCFLIFGGKFNTLIEYPTKVLVYGILAAIL
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
VILGTFVLYYGLNRGKASVVVPISSIGPAITTILAVIFLKEHLSSQQIFGIAMILGGIIL
HHHHHHHHHHCCCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
LSISS
HEECC
>Mature Secondary Structure
MYGVGTFFAKIVSNEDPYLQWILVNIVGIILCFLIFGGKFNTLIEYPTKVLVYGILAAIL
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
VILGTFVLYYGLNRGKASVVVPISSIGPAITTILAVIFLKEHLSSQQIFGIAMILGGIIL
HHHHHHHHHHCCCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
LSISS
HEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]