Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is ubiX [C]

Identifier: 150399616

GI number: 150399616

Start: 890133

End: 890690

Strand: Reverse

Name: ubiX [C]

Synonym: Mevan_0866

Alternate gene names: 150399616

Gene position: 890690-890133 (Counterclockwise)

Preceding gene: 150399617

Following gene: 150399615

Centisome position: 51.78

GC content: 32.26

Gene sequence:

>558_bases
ATGGAAGAGATAGTAGTCTGTATCACAGGTGCAAGTGGCGTTATATATGCAAAAAGGCTTTTAGAAGAATTAAACGGAAA
ATCGATTAAAACAACATTGATTATATCAAATTCAGCAAAAAAAATAATTAAACACGAGCTTAGAATAGAACTTGACGAAT
TTAAGAAACTTTCAGATAATTACTATGAAAATGATAATTTTTTTTCTCCCGTTGCATCAGGTTCACATAAATTTAGCTCT
GTAATTGTAGTTCCATGTTCAATGAAAACACTTTCTTCAATTGCTAATGGGTATGGGGATAACTTAATTGGTAGAGTCTC
TGATATCGCACTAAAAGAAAGGAGAAAACTATTAATTGTTCCAAGGGAAATGCCCTTTAGTACAATCCATCTTGAAAACA
TGGTAAAACTATCAAAATTAGGGGTCTCTGTAATTCCGCCAGCTCCTGGATTTTATAATGATCCAAAAACAGTTGAAGAT
ATGGTAAATTTTGTTGTTGGCCGGATACTTGATAATTTGGGTGTTGAAAATAACATATTTAAGAGATGGGGAGAATAA

Upstream 100 bases:

>100_bases
AAAAGTTATATCCGTACATCTAAATTTTTAATTATTTTTTGGTGTTAATATATATAAAAAGTCGATAGATATTTTTATTA
ATAATTACTAAAGGGATAAA

Downstream 100 bases:

>100_bases
TTATCTGCTAATAATTTGGTGAAAACATGCTTGATAAGTTAGGGCAAAACCTGTCTGAAGCACTGAATAAGATAAAAAAT
GCTACGTTTGTCGATAAAAA

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MEEIVVCITGASGVIYAKRLLEELNGKSIKTTLIISNSAKKIIKHELRIELDEFKKLSDNYYENDNFFSPVASGSHKFSS
VIVVPCSMKTLSSIANGYGDNLIGRVSDIALKERRKLLIVPREMPFSTIHLENMVKLSKLGVSVIPPAPGFYNDPKTVED
MVNFVVGRILDNLGVENNIFKRWGE

Sequences:

>Translated_185_residues
MEEIVVCITGASGVIYAKRLLEELNGKSIKTTLIISNSAKKIIKHELRIELDEFKKLSDNYYENDNFFSPVASGSHKFSS
VIVVPCSMKTLSSIANGYGDNLIGRVSDIALKERRKLLIVPREMPFSTIHLENMVKLSKLGVSVIPPAPGFYNDPKTVED
MVNFVVGRILDNLGVENNIFKRWGE
>Mature_185_residues
MEEIVVCITGASGVIYAKRLLEELNGKSIKTTLIISNSAKKIIKHELRIELDEFKKLSDNYYENDNFFSPVASGSHKFSS
VIVVPCSMKTLSSIANGYGDNLIGRVSDIALKERRKLLIVPREMPFSTIHLENMVKLSKLGVSVIPPAPGFYNDPKTVED
MVNFVVGRILDNLGVENNIFKRWGE

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=186, Percent_Identity=36.0215053763441, Blast_Score=147, Evalue=4e-37,
Organism=Saccharomyces cerevisiae, GI6320746, Length=182, Percent_Identity=43.4065934065934, Blast_Score=163, Evalue=1e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 20675; Mature: 20675

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEIVVCITGASGVIYAKRLLEELNGKSIKTTLIISNSAKKIIKHELRIELDEFKKLSDN
CCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHCCHHHHHHHHCC
YYENDNFFSPVASGSHKFSSVIVVPCSMKTLSSIANGYGDNLIGRVSDIALKERRKLLIV
CCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEE
PREMPFSTIHLENMVKLSKLGVSVIPPAPGFYNDPKTVEDMVNFVVGRILDNLGVENNIF
ECCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH
KRWGE
HHCCC
>Mature Secondary Structure
MEEIVVCITGASGVIYAKRLLEELNGKSIKTTLIISNSAKKIIKHELRIELDEFKKLSDN
CCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHCCHHHHHHHHCC
YYENDNFFSPVASGSHKFSSVIVVPCSMKTLSSIANGYGDNLIGRVSDIALKERRKLLIV
CCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEE
PREMPFSTIHLENMVKLSKLGVSVIPPAPGFYNDPKTVEDMVNFVVGRILDNLGVENNIF
ECCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH
KRWGE
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]