| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is ubiX [C]
Identifier: 150399616
GI number: 150399616
Start: 890133
End: 890690
Strand: Reverse
Name: ubiX [C]
Synonym: Mevan_0866
Alternate gene names: 150399616
Gene position: 890690-890133 (Counterclockwise)
Preceding gene: 150399617
Following gene: 150399615
Centisome position: 51.78
GC content: 32.26
Gene sequence:
>558_bases ATGGAAGAGATAGTAGTCTGTATCACAGGTGCAAGTGGCGTTATATATGCAAAAAGGCTTTTAGAAGAATTAAACGGAAA ATCGATTAAAACAACATTGATTATATCAAATTCAGCAAAAAAAATAATTAAACACGAGCTTAGAATAGAACTTGACGAAT TTAAGAAACTTTCAGATAATTACTATGAAAATGATAATTTTTTTTCTCCCGTTGCATCAGGTTCACATAAATTTAGCTCT GTAATTGTAGTTCCATGTTCAATGAAAACACTTTCTTCAATTGCTAATGGGTATGGGGATAACTTAATTGGTAGAGTCTC TGATATCGCACTAAAAGAAAGGAGAAAACTATTAATTGTTCCAAGGGAAATGCCCTTTAGTACAATCCATCTTGAAAACA TGGTAAAACTATCAAAATTAGGGGTCTCTGTAATTCCGCCAGCTCCTGGATTTTATAATGATCCAAAAACAGTTGAAGAT ATGGTAAATTTTGTTGTTGGCCGGATACTTGATAATTTGGGTGTTGAAAATAACATATTTAAGAGATGGGGAGAATAA
Upstream 100 bases:
>100_bases AAAAGTTATATCCGTACATCTAAATTTTTAATTATTTTTTGGTGTTAATATATATAAAAAGTCGATAGATATTTTTATTA ATAATTACTAAAGGGATAAA
Downstream 100 bases:
>100_bases TTATCTGCTAATAATTTGGTGAAAACATGCTTGATAAGTTAGGGCAAAACCTGTCTGAAGCACTGAATAAGATAAAAAAT GCTACGTTTGTCGATAAAAA
Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MEEIVVCITGASGVIYAKRLLEELNGKSIKTTLIISNSAKKIIKHELRIELDEFKKLSDNYYENDNFFSPVASGSHKFSS VIVVPCSMKTLSSIANGYGDNLIGRVSDIALKERRKLLIVPREMPFSTIHLENMVKLSKLGVSVIPPAPGFYNDPKTVED MVNFVVGRILDNLGVENNIFKRWGE
Sequences:
>Translated_185_residues MEEIVVCITGASGVIYAKRLLEELNGKSIKTTLIISNSAKKIIKHELRIELDEFKKLSDNYYENDNFFSPVASGSHKFSS VIVVPCSMKTLSSIANGYGDNLIGRVSDIALKERRKLLIVPREMPFSTIHLENMVKLSKLGVSVIPPAPGFYNDPKTVED MVNFVVGRILDNLGVENNIFKRWGE >Mature_185_residues MEEIVVCITGASGVIYAKRLLEELNGKSIKTTLIISNSAKKIIKHELRIELDEFKKLSDNYYENDNFFSPVASGSHKFSS VIVVPCSMKTLSSIANGYGDNLIGRVSDIALKERRKLLIVPREMPFSTIHLENMVKLSKLGVSVIPPAPGFYNDPKTVED MVNFVVGRILDNLGVENNIFKRWGE
Specific function: Unknown
COG id: COG0163
COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]
Homologues:
Organism=Escherichia coli, GI1788650, Length=186, Percent_Identity=36.0215053763441, Blast_Score=147, Evalue=4e-37, Organism=Saccharomyces cerevisiae, GI6320746, Length=182, Percent_Identity=43.4065934065934, Blast_Score=163, Evalue=1e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003382 - InterPro: IPR004507 [H]
Pfam domain/function: PF02441 Flavoprotein [H]
EC number: 4.1.1.-
Molecular weight: Translated: 20675; Mature: 20675
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEIVVCITGASGVIYAKRLLEELNGKSIKTTLIISNSAKKIIKHELRIELDEFKKLSDN CCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHCCHHHHHHHHCC YYENDNFFSPVASGSHKFSSVIVVPCSMKTLSSIANGYGDNLIGRVSDIALKERRKLLIV CCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEE PREMPFSTIHLENMVKLSKLGVSVIPPAPGFYNDPKTVEDMVNFVVGRILDNLGVENNIF ECCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH KRWGE HHCCC >Mature Secondary Structure MEEIVVCITGASGVIYAKRLLEELNGKSIKTTLIISNSAKKIIKHELRIELDEFKKLSDN CCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHCCHHHHHHHHCC YYENDNFFSPVASGSHKFSSVIVVPCSMKTLSSIANGYGDNLIGRVSDIALKERRKLLIV CCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEE PREMPFSTIHLENMVKLSKLGVSVIPPAPGFYNDPKTVEDMVNFVVGRILDNLGVENNIF ECCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH KRWGE HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]