| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399617
Identifier: 150399617
GI number: 150399617
Start: 891300
End: 892610
Strand: Reverse
Name: 150399617
Synonym: Mevan_0867
Alternate gene names: NA
Gene position: 892610-891300 (Counterclockwise)
Preceding gene: 150399631
Following gene: 150399616
Centisome position: 51.89
GC content: 30.51
Gene sequence:
>1311_bases ATGAACCAAAAGCTTGGATTTATTAATATTGATGAGGAATTTAATTTTGAAAATAACTCGTTTGACAATAATGGTGGTAA ATCACAGCTGTTAATCGACTTAAAAGGAGAACCTGGAAAAAATTGTGGGGGATTTTGTAAATTTTGTTATTTTAGAAAAG TTAATTTTAATAATCCTGAACCCCTAGGGTGTAAACAATGTACATTTCAAATAGGGTGCGACTACTGTATAAATTCCATT CGTGAAATAAATGGCTCATTTATTCCTTTGCCATTTGCACTTGAACAGGTTCAAAGTTCGCTAATGTTTCAAAAATATGA AAAAGTAAACATAACAAGTGGCGGAGATACAAGTTATTACCCTTATCTTGAAGACCTTTGCAAAATAATAAATCAAATGG GTTTAAAAATTCATTTAGGATATACCTCAGGCAAGGGATTTAAAAACTTAAATCAAGTTAAAAATCTTGTTAATTTTGGA GTTAATGAAGTCACATTTTCTGTTTTTTCAACAGATCCAAATATTAGAAAAGAATGGATGAGTGACAAGAATCCCGAAAT TTCTCTTGAATGTTTAAAGTATTTTTGTAATACTTGTGAAACACACTGTGCAATAATTGTTGTTCCAGGTATAAATGATG GCGAAAACCTAAAAAATACAATAAAAGACCTCACTTCATGGGGGGCAAATGCTGTAATACTAATGAGATTTGCAAATAAA GTTGAAAATGGCCTTATACTTGAAAATGAACCATTAATTGAGGAAATAAATGTTTCAAGCGTTGAAAGGTTTGGGAAACT CGTAAAAGAAATGCATGAGCTCTTTGGTGAAAAAATAAGAATTTCAGGAACGCCCGTTTATGATCCTTTAACAAATACTC CATTTGCAATTTACTATGAAAAAAGTATCTTGAACGATTTAAGGAAGAAAATAAGGGCAAAAGCAACAATTATCACGGGA AAGGTTTCATATTGGTATCTATCAAAAATATTTAACGGGACTCCCGTAACAGTAATTTCAGTAAATAAGGATATATCTGA CTTAATTACTAAAAAAGATTTAGAAACTATCGATTTATCTAAATTGACAGATACCGTATTTTACCCTGAAAATGCACTCG TTCACGAACGAGATGCGGAAGAAATTTTAACAAAAGATGGTGTTAAACGGTTTGTTTTAAGGGGAATTGATAAATTAACA ATGGATGGGGAAGTTTCAGGAGTATTTACAAAAGAAGAAGCAGTTAATTTTGAAATTAATGCATTTACAGAATTAATTGA AAAAATAAATTTTTTTGGAAATCCCATCTAA
Upstream 100 bases:
>100_bases GATAAATTTGTAATTAGCATGACAAAAACTAATATTGGAATTCTATTTTTAATGAATTACTACTTACTACTATTTTTATA AAAGTAAATAAGATGGTAAT
Downstream 100 bases:
>100_bases TTTTAATTTTTTTTTATAAAATATCAATTTATAAATTTAAATTAATAAATTAATTTACTCAAAAAAGAAAATGCCGAGGG GGGGACTTGAACCCCCGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 436; Mature: 436
Protein sequence:
>436_residues MNQKLGFINIDEEFNFENNSFDNNGGKSQLLIDLKGEPGKNCGGFCKFCYFRKVNFNNPEPLGCKQCTFQIGCDYCINSI REINGSFIPLPFALEQVQSSLMFQKYEKVNITSGGDTSYYPYLEDLCKIINQMGLKIHLGYTSGKGFKNLNQVKNLVNFG VNEVTFSVFSTDPNIRKEWMSDKNPEISLECLKYFCNTCETHCAIIVVPGINDGENLKNTIKDLTSWGANAVILMRFANK VENGLILENEPLIEEINVSSVERFGKLVKEMHELFGEKIRISGTPVYDPLTNTPFAIYYEKSILNDLRKKIRAKATIITG KVSYWYLSKIFNGTPVTVISVNKDISDLITKKDLETIDLSKLTDTVFYPENALVHERDAEEILTKDGVKRFVLRGIDKLT MDGEVSGVFTKEEAVNFEINAFTELIEKINFFGNPI
Sequences:
>Translated_436_residues MNQKLGFINIDEEFNFENNSFDNNGGKSQLLIDLKGEPGKNCGGFCKFCYFRKVNFNNPEPLGCKQCTFQIGCDYCINSI REINGSFIPLPFALEQVQSSLMFQKYEKVNITSGGDTSYYPYLEDLCKIINQMGLKIHLGYTSGKGFKNLNQVKNLVNFG VNEVTFSVFSTDPNIRKEWMSDKNPEISLECLKYFCNTCETHCAIIVVPGINDGENLKNTIKDLTSWGANAVILMRFANK VENGLILENEPLIEEINVSSVERFGKLVKEMHELFGEKIRISGTPVYDPLTNTPFAIYYEKSILNDLRKKIRAKATIITG KVSYWYLSKIFNGTPVTVISVNKDISDLITKKDLETIDLSKLTDTVFYPENALVHERDAEEILTKDGVKRFVLRGIDKLT MDGEVSGVFTKEEAVNFEINAFTELIEKINFFGNPI >Mature_436_residues MNQKLGFINIDEEFNFENNSFDNNGGKSQLLIDLKGEPGKNCGGFCKFCYFRKVNFNNPEPLGCKQCTFQIGCDYCINSI REINGSFIPLPFALEQVQSSLMFQKYEKVNITSGGDTSYYPYLEDLCKIINQMGLKIHLGYTSGKGFKNLNQVKNLVNFG VNEVTFSVFSTDPNIRKEWMSDKNPEISLECLKYFCNTCETHCAIIVVPGINDGENLKNTIKDLTSWGANAVILMRFANK VENGLILENEPLIEEINVSSVERFGKLVKEMHELFGEKIRISGTPVYDPLTNTPFAIYYEKSILNDLRKKIRAKATIITG KVSYWYLSKIFNGTPVTVISVNKDISDLITKKDLETIDLSKLTDTVFYPENALVHERDAEEILTKDGVKRFVLRGIDKLT MDGEVSGVFTKEEAVNFEINAFTELIEKINFFGNPI
Specific function: Unknown
COG id: COG1625
COG function: function code C; Fe-S oxidoreductase, related to NifB/MoaA family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007549 - InterPro: IPR006638 - InterPro: IPR017672 - InterPro: IPR007197 [H]
Pfam domain/function: PF04459 DUF512; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 49388; Mature: 49388
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQKLGFINIDEEFNFENNSFDNNGGKSQLLIDLKGEPGKNCGGFCKFCYFRKVNFNNPE CCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHEEEECCCCCCC PLGCKQCTFQIGCDYCINSIREINGSFIPLPFALEQVQSSLMFQKYEKVNITSGGDTSYY CCCHHHHHHEECHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHEEEEECCCCCCCC PYLEDLCKIINQMGLKIHLGYTSGKGFKNLNQVKNLVNFGVNEVTFSVFSTDPNIRKEWM HHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHC SDKNPEISLECLKYFCNTCETHCAIIVVPGINDGENLKNTIKDLTSWGANAVILMRFANK CCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHH VENGLILENEPLIEEINVSSVERFGKLVKEMHELFGEKIRISGTPVYDPLTNTPFAIYYE HCCCEEECCCCCHHHCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEEEH KSILNDLRKKIRAKATIITGKVSYWYLSKIFNGTPVTVISVNKDISDLITKKDLETIDLS HHHHHHHHHHHHHHEEEEECCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHCCCCHHHHH KLTDTVFYPENALVHERDAEEILTKDGVKRFVLRGIDKLTMDGEVSGVFTKEEAVNFEIN HHHHHEECCCCCEECCCCHHHHHHHHHHHHHHHHCCHHEEECCCCCEEEECCHHCEEEHH AFTELIEKINFFGNPI HHHHHHHHHHHCCCCC >Mature Secondary Structure MNQKLGFINIDEEFNFENNSFDNNGGKSQLLIDLKGEPGKNCGGFCKFCYFRKVNFNNPE CCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHEEEECCCCCCC PLGCKQCTFQIGCDYCINSIREINGSFIPLPFALEQVQSSLMFQKYEKVNITSGGDTSYY CCCHHHHHHEECHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHEEEEECCCCCCCC PYLEDLCKIINQMGLKIHLGYTSGKGFKNLNQVKNLVNFGVNEVTFSVFSTDPNIRKEWM HHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHC SDKNPEISLECLKYFCNTCETHCAIIVVPGINDGENLKNTIKDLTSWGANAVILMRFANK CCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEHHHHHH VENGLILENEPLIEEINVSSVERFGKLVKEMHELFGEKIRISGTPVYDPLTNTPFAIYYE HCCCEEECCCCCHHHCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEEEH KSILNDLRKKIRAKATIITGKVSYWYLSKIFNGTPVTVISVNKDISDLITKKDLETIDLS HHHHHHHHHHHHHHEEEEECCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHCCCCHHHHH KLTDTVFYPENALVHERDAEEILTKDGVKRFVLRGIDKLTMDGEVSGVFTKEEAVNFEIN HHHHHEECCCCCEECCCCHHHHHHHHHHHHHHHHCCHHEEECCCCCEEEECCHHCEEEHH AFTELIEKINFFGNPI HHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]