| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
Click here to switch to the map view.
The map label for this gene is 150399580
Identifier: 150399580
GI number: 150399580
Start: 859861
End: 860529
Strand: Reverse
Name: 150399580
Synonym: Mevan_0829
Alternate gene names: NA
Gene position: 860529-859861 (Counterclockwise)
Preceding gene: 150399581
Following gene: 150399579
Centisome position: 50.03
GC content: 30.34
Gene sequence:
>669_bases ATGGAATTTGACCTATGGGTTAGAATTATTAAAGAAAGTATCGAACAAAAGAATGTTGACCCTTGGAACGTCAACATCTC TGAGATAACGGATCAATACCTTGGAACCATAAGAGAACTTAGAAAATTTGATATACGGCTTTCTGCAGATGTCGTACTGG TTGCAGGGATTTTACTTCGTTTAAAATCGCAAGTACTTTATGGGGAGTGTGAAAATGCGTTTAAAGAGGAAGTTGAAGAT AATTATGACGATGAAGAATATTTAGATGAAGAATATTTAGATGACCAAATAGTTGAACCTATTGAAAAAAAACAAAAAGA GCCAAAACTGGAAAATATGACCTTAGATGGCCTTATCAGTACCCTTAAAACTGAACTTAAAAAAATTAAGGAAATAAAAC CCCGCAAAAAAAGAGAAATTGTACGGCCAACCGAATTATATAGGTTAGTTGAAGAAATGATTGAAGAAGACGATATTTCC GATCTAATGGAATTTATGATTTTGGAATTAAAAAAATCAGGCGGAAAATTTATATTTCAAAATAAATTTAAAACAAGGGA TGAATTAATAAAAAATTTTCTACCTGTATTATATCTTGCAAATGATGGAAAAATTGATTTAGAGCAGGAAACTTTATTTG AAGAATTAAGCATCGAATTAAAAAAATAA
Upstream 100 bases:
>100_bases TGACGGTTCAAAAGTAATCTCTTGGAATTTTTTAGTATGGCTTTTAATATTTATTCCCCTATTTGTACTGACGTTCTTCT AAAAAACATGGAATGATAAA
Downstream 100 bases:
>100_bases TATTTTTATTATACTTTTTTAAACTTATTAAGATTATTGCAAACCATATCAAAAAAATCAAATCGAAATAGTTATATATA CCTTCATAGTCATATACATA
Product: chromosome segregation and condensation protein ScpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MEFDLWVRIIKESIEQKNVDPWNVNISEITDQYLGTIRELRKFDIRLSADVVLVAGILLRLKSQVLYGECENAFKEEVED NYDDEEYLDEEYLDDQIVEPIEKKQKEPKLENMTLDGLISTLKTELKKIKEIKPRKKREIVRPTELYRLVEEMIEEDDIS DLMEFMILELKKSGGKFIFQNKFKTRDELIKNFLPVLYLANDGKIDLEQETLFEELSIELKK
Sequences:
>Translated_222_residues MEFDLWVRIIKESIEQKNVDPWNVNISEITDQYLGTIRELRKFDIRLSADVVLVAGILLRLKSQVLYGECENAFKEEVED NYDDEEYLDEEYLDDQIVEPIEKKQKEPKLENMTLDGLISTLKTELKKIKEIKPRKKREIVRPTELYRLVEEMIEEDDIS DLMEFMILELKKSGGKFIFQNKFKTRDELIKNFLPVLYLANDGKIDLEQETLFEELSIELKK >Mature_222_residues MEFDLWVRIIKESIEQKNVDPWNVNISEITDQYLGTIRELRKFDIRLSADVVLVAGILLRLKSQVLYGECENAFKEEVED NYDDEEYLDEEYLDDQIVEPIEKKQKEPKLENMTLDGLISTLKTELKKIKEIKPRKKREIVRPTELYRLVEEMIEEDDIS DLMEFMILELKKSGGKFIFQNKFKTRDELIKNFLPVLYLANDGKIDLEQETLFEELSIELKK
Specific function: Unknown
COG id: COG1354
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003768 [H]
Pfam domain/function: PF02616 ScpA_ScpB [H]
EC number: NA
Molecular weight: Translated: 26388; Mature: 26388
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFDLWVRIIKESIEQKNVDPWNVNISEITDQYLGTIRELRKFDIRLSADVVLVAGILLR CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH LKSQVLYGECENAFKEEVEDNYDDEEYLDEEYLDDQIVEPIEKKQKEPKLENMTLDGLIS HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHH TLKTELKKIKEIKPRKKREIVRPTELYRLVEEMIEEDDISDLMEFMILELKKSGGKFIFQ HHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEC NKFKTRDELIKNFLPVLYLANDGKIDLEQETLFEELSIELKK CCCCCHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MEFDLWVRIIKESIEQKNVDPWNVNISEITDQYLGTIRELRKFDIRLSADVVLVAGILLR CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH LKSQVLYGECENAFKEEVEDNYDDEEYLDEEYLDDQIVEPIEKKQKEPKLENMTLDGLIS HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHH TLKTELKKIKEIKPRKKREIVRPTELYRLVEEMIEEDDISDLMEFMILELKKSGGKFIFQ HHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEC NKFKTRDELIKNFLPVLYLANDGKIDLEQETLFEELSIELKK CCCCCHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]