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The map label for this gene is srp19

Identifier: 150399185

GI number: 150399185

Start: 485215

End: 485484

Strand: Reverse

Name: srp19

Synonym: Mevan_0432

Alternate gene names: 150399185

Gene position: 485484-485215 (Counterclockwise)

Preceding gene: 150399186

Following gene: 150399179

Centisome position: 28.23

GC content: 30.0

Gene sequence:

>270_bases
ATGAAAGAAATTGTAATCTGGCCAGCATACTTCGACTTAAAAAGGACTAAAAACGAAGGTAGGAAGGTTCCAAAAAGTTT
TGGAGTATTAAACCCTAAACTAAAAGATATTGTAAGCATAATTGAAAAAATGGGTCATGAATATTCAATAGATAATAAAA
AAAGTTATCCAAAAGAGCCGTGGGAAATATGCGGTTACTTAAAAGTAACCATTGATGAAAAGACGTCAAAACTTGACTTT
TTAAAAGAACTTTGTAAAAGAATGAAGTAA

Upstream 100 bases:

>100_bases
ATAATGATTTTTTATTGTTACTGCTATTTCACTTGTATTAATTTAGTTTTCAGGATATTTACGGGAAAAATGGATAAATT
GGAAGAAATGGTGAAATCTT

Downstream 100 bases:

>100_bases
ATTATTTTGTAGGCTTTTTAGAGTTTTCTGATTCCTTAATTTCAAGTTCAGATAATAAAAAATTTGTTCTTTTTTCTAAT
TTATCATAATCTTTTGATAA

Product: ribonucleoprotein complex SRP, Srp19 component

Products: NA

Alternate protein names: SRP19

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MKEIVIWPAYFDLKRTKNEGRKVPKSFGVLNPKLKDIVSIIEKMGHEYSIDNKKSYPKEPWEICGYLKVTIDEKTSKLDF
LKELCKRMK

Sequences:

>Translated_89_residues
MKEIVIWPAYFDLKRTKNEGRKVPKSFGVLNPKLKDIVSIIEKMGHEYSIDNKKSYPKEPWEICGYLKVTIDEKTSKLDF
LKELCKRMK
>Mature_89_residues
MKEIVIWPAYFDLKRTKNEGRKVPKSFGVLNPKLKDIVSIIEKMGHEYSIDNKKSYPKEPWEICGYLKVTIDEKTSKLDF
LKELCKRMK

Specific function: Signal-recognition-particle assembly, binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP

COG id: COG1400

COG function: function code U; Signal recognition particle 19 kDa protein

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SRP19 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SRP19_METVS (A6UPB8)

Other databases:

- EMBL:   CP000742
- RefSeq:   YP_001322952.1
- ProteinModelPortal:   A6UPB8
- SMR:   A6UPB8
- STRING:   A6UPB8
- GeneID:   5325442
- GenomeReviews:   CP000742_GR
- KEGG:   mvn:Mevan_0432
- eggNOG:   arNOG12644
- HOGENOM:   HBG629394
- ProtClustDB:   CLSK876435
- HAMAP:   MF_00305
- InterPro:   IPR002778
- InterPro:   IPR022938
- Gene3D:   G3DSA:3.30.56.30
- PANTHER:   PTHR17453

Pfam domain/function: PF01922 SRP19; SSF69695 Signal_recog_particle_SRP19

EC number: NA

Molecular weight: Translated: 10537; Mature: 10537

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEIVIWPAYFDLKRTKNEGRKVPKSFGVLNPKLKDIVSIIEKMGHEYSIDNKKSYPKEP
CCCEEEECCHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCH
WEICGYLKVTIDEKTSKLDFLKELCKRMK
HHHHCCCEEEECCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKEIVIWPAYFDLKRTKNEGRKVPKSFGVLNPKLKDIVSIIEKMGHEYSIDNKKSYPKEP
CCCEEEECCHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCH
WEICGYLKVTIDEKTSKLDFLKELCKRMK
HHHHCCCEEEECCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA