| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399186
Identifier: 150399186
GI number: 150399186
Start: 485824
End: 486936
Strand: Reverse
Name: 150399186
Synonym: Mevan_0434
Alternate gene names: NA
Gene position: 486936-485824 (Counterclockwise)
Preceding gene: 150399187
Following gene: 150399185
Centisome position: 28.31
GC content: 31.18
Gene sequence:
>1113_bases ATGGTATCAATAAAAGATATCGGCAAAGATAATGTTCCTGAAGACAAAAAGTATATTATTATTGTTGTTGATATGGACGA CGATATAGGAAGAAAAGCAAATATAAGAACCCCGATACTTGGTAGGGAGGATAATATTAATGCAGCTGTGCGTTTAGGTT TGACTGATCCAGGAGATAGTGATTTAAACTCCATACTTGGCGGAGTTCAGCACTACGATTACCTGAAAAAGGAAGGAAAG GACGTAGAAATTGCAACAGTTTCAGGAGATATTGATGTAGAGTCTGAAGTATGTGCAATTAGAATAAAAGAACAACTCGA TTTTTTAATATATTTATATGAGCCGGACTTTATTTACCTTGTTTCAGATGGAAAAGAAGATGAACTTGTTTTAAAGTACC TTGAATTAAAAGACGTGTTTGTATGGAAAAAAAGAATAGTGATTAAGCAAAACGAGTCATTAGAATCAACTTACTATCTT ATGCAGGAATTTATAAAAAAGACAATGTCTCAATATATCCCCTTGATATTCACATCGATTGGTTTTGCAATGATACTTTA TGCATTATTTTCAGATTTAGGCTGGAGAATAATTTCAGGGTTAATCGGGATATATATTCTCTCAGAAGGAGTCGGATTAG TCGAATCAATTAAAAAAATGCTTAAAGAAAGTAGGAAAGGACTTGAACTTGGAAAATTATCTCCATTTGGGAATATTTTA GGATATTTAATAGTTATAGTGGGTATACTCTATTCATACAAGGTATCGGAAGACCCTGAACTTGCAATATTTTTTGGAAA ATTCCTTTTTAACCTTGCAAACCCTTTAACGCTTGGATTTTTGGTTTTAGTAACGGTTAATTTTATAGATGACTTAATAC ATACTGAAAAAAGTATACTTTCCCTTTTAAAAAAGCTATTTTTTAATGTAATTTTGGCATTTATGTTAAGACAGATGTTT TTAATTTCCTCAGAATATTTAACTGGAGTAGCTTTTGAATTTACGACCCTTGCAATGTATATTATTGCATATATTTCGAT ATTGATTATACTTTCCGTTGTATTATTTCACGGGCCCAAAAAATCTAAAATATCACAAAAAACAGAAGAGTAA
Upstream 100 bases:
>100_bases TCCCCTAAATTAACATCTAAGCTACTTATAAATTAAAATAACTAAAATAACTAAAATAAAAGATTTATTTATTTGTTATT TCAATGTTAAAGTGATAATA
Downstream 100 bases:
>100_bases CGTTGAGAAGATGATGAAAATTTGAAAACCTTTATTACGGTATTTTACAGTTAAGTGATATGGAAACTACATATCGAAAA ACTGCTTTCTCTAATTGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MVSIKDIGKDNVPEDKKYIIIVVDMDDDIGRKANIRTPILGREDNINAAVRLGLTDPGDSDLNSILGGVQHYDYLKKEGK DVEIATVSGDIDVESEVCAIRIKEQLDFLIYLYEPDFIYLVSDGKEDELVLKYLELKDVFVWKKRIVIKQNESLESTYYL MQEFIKKTMSQYIPLIFTSIGFAMILYALFSDLGWRIISGLIGIYILSEGVGLVESIKKMLKESRKGLELGKLSPFGNIL GYLIVIVGILYSYKVSEDPELAIFFGKFLFNLANPLTLGFLVLVTVNFIDDLIHTEKSILSLLKKLFFNVILAFMLRQMF LISSEYLTGVAFEFTTLAMYIIAYISILIILSVVLFHGPKKSKISQKTEE
Sequences:
>Translated_370_residues MVSIKDIGKDNVPEDKKYIIIVVDMDDDIGRKANIRTPILGREDNINAAVRLGLTDPGDSDLNSILGGVQHYDYLKKEGK DVEIATVSGDIDVESEVCAIRIKEQLDFLIYLYEPDFIYLVSDGKEDELVLKYLELKDVFVWKKRIVIKQNESLESTYYL MQEFIKKTMSQYIPLIFTSIGFAMILYALFSDLGWRIISGLIGIYILSEGVGLVESIKKMLKESRKGLELGKLSPFGNIL GYLIVIVGILYSYKVSEDPELAIFFGKFLFNLANPLTLGFLVLVTVNFIDDLIHTEKSILSLLKKLFFNVILAFMLRQMF LISSEYLTGVAFEFTTLAMYIIAYISILIILSVVLFHGPKKSKISQKTEE >Mature_370_residues MVSIKDIGKDNVPEDKKYIIIVVDMDDDIGRKANIRTPILGREDNINAAVRLGLTDPGDSDLNSILGGVQHYDYLKKEGK DVEIATVSGDIDVESEVCAIRIKEQLDFLIYLYEPDFIYLVSDGKEDELVLKYLELKDVFVWKKRIVIKQNESLESTYYL MQEFIKKTMSQYIPLIFTSIGFAMILYALFSDLGWRIISGLIGIYILSEGVGLVESIKKMLKESRKGLELGKLSPFGNIL GYLIVIVGILYSYKVSEDPELAIFFGKFLFNLANPLTLGFLVLVTVNFIDDLIHTEKSILSLLKKLFFNVILAFMLRQMF LISSEYLTGVAFEFTTLAMYIIAYISILIILSVVLFHGPKKSKISQKTEE
Specific function: Unknown
COG id: COG2237
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To A.fulgidus AF2058 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007254 [H]
Pfam domain/function: PF04123 DUF373 [H]
EC number: NA
Molecular weight: Translated: 41978; Mature: 41978
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSIKDIGKDNVPEDKKYIIIVVDMDDDIGRKANIRTPILGREDNINAAVRLGLTDPGDS CCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCH DLNSILGGVQHYDYLKKEGKDVEIATVSGDIDVESEVCAIRIKEQLDFLIYLYEPDFIYL HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHEEEHHCCCEEEEEECCCEEEE VSDGKEDELVLKYLELKDVFVWKKRIVIKQNESLESTYYLMQEFIKKTMSQYIPLIFTSI ECCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GFAMILYALFSDLGWRIISGLIGIYILSEGVGLVESIKKMLKESRKGLELGKLSPFGNIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHH GYLIVIVGILYSYKVSEDPELAIFFGKFLFNLANPLTLGFLVLVTVNFIDDLIHTEKSIL HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH SLLKKLFFNVILAFMLRQMFLISSEYLTGVAFEFTTLAMYIIAYISILIILSVVLFHGPK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KSKISQKTEE CHHCCCCCCC >Mature Secondary Structure MVSIKDIGKDNVPEDKKYIIIVVDMDDDIGRKANIRTPILGREDNINAAVRLGLTDPGDS CCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCH DLNSILGGVQHYDYLKKEGKDVEIATVSGDIDVESEVCAIRIKEQLDFLIYLYEPDFIYL HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHEEEHHCCCEEEEEECCCEEEE VSDGKEDELVLKYLELKDVFVWKKRIVIKQNESLESTYYLMQEFIKKTMSQYIPLIFTSI ECCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GFAMILYALFSDLGWRIISGLIGIYILSEGVGLVESIKKMLKESRKGLELGKLSPFGNIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHH GYLIVIVGILYSYKVSEDPELAIFFGKFLFNLANPLTLGFLVLVTVNFIDDLIHTEKSIL HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH SLLKKLFFNVILAFMLRQMFLISSEYLTGVAFEFTTLAMYIIAYISILIILSVVLFHGPK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC KSKISQKTEE CHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]