| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is adhB [H]
Identifier: 150398899
GI number: 150398899
Start: 162977
End: 164140
Strand: Reverse
Name: adhB [H]
Synonym: Mevan_0143
Alternate gene names: 150398899
Gene position: 164140-162977 (Counterclockwise)
Preceding gene: 150398900
Following gene: 150398898
Centisome position: 9.54
GC content: 33.16
Gene sequence:
>1164_bases ATGAAAAAATCCTATAATTTCTTACGAAAAATAGTTATACCTGAATTTGTGTATGGAATTGGTGCAATATCTTTAGTTGG GCACTACGCTAAAAATTTTGGTGCAAAAAAAGCCCTTATTGTAACGGATTTAGGCGTTTTAAAGGCAGGAATTTTAAAAA ATGTAACGTTATCTTTAGAGTCGGAAAAAATTAGTTATATAATCTTTAGCGATGTTTCAGAAAACCCAAGGATTTATGAA GTTGAAAAGGGTGCCAGTGTTTACGAAAAAAACAATTGCGATATAATAATTGCCGTAGGGGGCGGAAGTCCGATTGATTG TGCAAAAACCATAGGAATAACATATACTAATAAAAAAAACCCGCTTGAATTTATCGGGGTAGATGAAGTAGATATTCCTG GGCCCCCTTTAATCTGTATCCCTACTACATCAGGATCATCAGCAGACGTTTCTCAGTTTGCAATATTGAATGACAATTCT AAAAATGTAAAACTTGCAATTATAAGTAAATCTGTAGTTTCAGATGTTTCTATAATTGACCCTAAAACAACAATTACAAT GACTGAAAGATTAACTGCCGCAACTGGAATGGATGCACTTTCACACGCTGTTGAAGCTTATGTATCTAATGCAAGTTCAA GTATTACTGATTTACATGCATTAGCTGCAATGCCTTTAATTGTAAATAATATAATGCCTGCAATAAAAGACCCTGAAAAT TTGGAATATCGTAGTAACATGATGCTTGGAAGTTTATATGCAGGAATTGCCTTTTCAAATGCAAGTTTAGGGCTTACACA TGCAATGGCCCATAGCCTTGGCGGTTTACTGGATTTACCCCATGGAATTTGTAATTCTCTTCTTCTTGAACATGTAGTTG ACTTTAATTATTACTATGCAACCGAAAAATACAAGGATATTGGAAATATTTTTGGATTAAATCTTGAAAATTACTCGGAT GAAGAGTGTAAATATAAAATAGTATCCTTTTTATCAGATTTAAGAAAATCTATTGGAATTACCGGCACAATTGGAACTTT AGGGGTTACTAAAAAGGAAATTCCATCACTTTCAATAAATGCCTTTAATGACCCGTGTATTGTAACTAATCCTAGAACTG CTACTTTAAATGATATTGAAATGGTGTATAAAAATGCACTCTGA
Upstream 100 bases:
>100_bases GAAAGATTTGAAAGGGTAGTTATAGAAAGGGAATTAAAAATGATTGAATTAAAAGAAAAAATCAGTAAACTTGAAAAGAA ATTAAAAGAGGCTGGTTTTA
Downstream 100 bases:
>100_bases TAACGAAATATCACTTCGAGATAAAATTATTGGATTAGGAGAACGTTCAGCTAAAAAAAGCTACTATCCTCAGTTACAGG AAAAATTAAAGTACCTTGAA
Product: iron-containing alcohol dehydrogenase
Products: NA
Alternate protein names: Alcohol dehydrogenase II; ADH II [H]
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MKKSYNFLRKIVIPEFVYGIGAISLVGHYAKNFGAKKALIVTDLGVLKAGILKNVTLSLESEKISYIIFSDVSENPRIYE VEKGASVYEKNNCDIIIAVGGGSPIDCAKTIGITYTNKKNPLEFIGVDEVDIPGPPLICIPTTSGSSADVSQFAILNDNS KNVKLAIISKSVVSDVSIIDPKTTITMTERLTAATGMDALSHAVEAYVSNASSSITDLHALAAMPLIVNNIMPAIKDPEN LEYRSNMMLGSLYAGIAFSNASLGLTHAMAHSLGGLLDLPHGICNSLLLEHVVDFNYYYATEKYKDIGNIFGLNLENYSD EECKYKIVSFLSDLRKSIGITGTIGTLGVTKKEIPSLSINAFNDPCIVTNPRTATLNDIEMVYKNAL
Sequences:
>Translated_387_residues MKKSYNFLRKIVIPEFVYGIGAISLVGHYAKNFGAKKALIVTDLGVLKAGILKNVTLSLESEKISYIIFSDVSENPRIYE VEKGASVYEKNNCDIIIAVGGGSPIDCAKTIGITYTNKKNPLEFIGVDEVDIPGPPLICIPTTSGSSADVSQFAILNDNS KNVKLAIISKSVVSDVSIIDPKTTITMTERLTAATGMDALSHAVEAYVSNASSSITDLHALAAMPLIVNNIMPAIKDPEN LEYRSNMMLGSLYAGIAFSNASLGLTHAMAHSLGGLLDLPHGICNSLLLEHVVDFNYYYATEKYKDIGNIFGLNLENYSD EECKYKIVSFLSDLRKSIGITGTIGTLGVTKKEIPSLSINAFNDPCIVTNPRTATLNDIEMVYKNAL >Mature_387_residues MKKSYNFLRKIVIPEFVYGIGAISLVGHYAKNFGAKKALIVTDLGVLKAGILKNVTLSLESEKISYIIFSDVSENPRIYE VEKGASVYEKNNCDIIIAVGGGSPIDCAKTIGITYTNKKNPLEFIGVDEVDIPGPPLICIPTTSGSSADVSQFAILNDNS KNVKLAIISKSVVSDVSIIDPKTTITMTERLTAATGMDALSHAVEAYVSNASSSITDLHALAAMPLIVNNIMPAIKDPEN LEYRSNMMLGSLYAGIAFSNASLGLTHAMAHSLGGLLDLPHGICNSLLLEHVVDFNYYYATEKYKDIGNIFGLNLENYSD EECKYKIVSFLSDLRKSIGITGTIGTLGVTKKEIPSLSINAFNDPCIVTNPRTATLNDIEMVYKNAL
Specific function: Unknown
COG id: COG1454
COG function: function code C; Alcohol dehydrogenase, class IV
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI133922590, Length=393, Percent_Identity=25.1908396946565, Blast_Score=135, Evalue=6e-32, Organism=Escherichia coli, GI48994951, Length=370, Percent_Identity=38.9189189189189, Blast_Score=267, Evalue=7e-73, Organism=Escherichia coli, GI1789163, Length=381, Percent_Identity=34.3832020997375, Blast_Score=241, Evalue=6e-65, Organism=Escherichia coli, GI87082107, Length=375, Percent_Identity=32.8, Blast_Score=205, Evalue=4e-54, Organism=Escherichia coli, GI1787493, Length=381, Percent_Identity=30.1837270341207, Blast_Score=183, Evalue=2e-47, Organism=Escherichia coli, GI1789386, Length=320, Percent_Identity=23.125, Blast_Score=77, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17537053, Length=427, Percent_Identity=24.824355971897, Blast_Score=135, Evalue=5e-32, Organism=Saccharomyces cerevisiae, GI6321181, Length=376, Percent_Identity=37.2340425531915, Blast_Score=233, Evalue=4e-62, Organism=Drosophila melanogaster, GI24657991, Length=410, Percent_Identity=23.4146341463415, Blast_Score=122, Evalue=5e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 [H]
Pfam domain/function: PF00465 Fe-ADH [H]
EC number: =1.1.1.1 [H]
Molecular weight: Translated: 41779; Mature: 41779
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: PS00060 ADH_IRON_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSYNFLRKIVIPEFVYGIGAISLVGHYAKNFGAKKALIVTDLGVLKAGILKNVTLSLE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHEEEEEE SEKISYIIFSDVSENPRIYEVEKGASVYEKNNCDIIIAVGGGSPIDCAKTIGITYTNKKN CCEEEEEEEECCCCCCCEEEEECCCCEEECCCCEEEEEECCCCCCCHHHEEEEEECCCCC PLEFIGVDEVDIPGPPLICIPTTSGSSADVSQFAILNDNSKNVKLAIISKSVVSDVSIID CEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCEEEEEEEEHHHHCCCEEEC PKTTITMTERLTAATGMDALSHAVEAYVSNASSSITDLHALAAMPLIVNNIMPAIKDPEN CCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC LEYRSNMMLGSLYAGIAFSNASLGLTHAMAHSLGGLLDLPHGICNSLLLEHVVDFNYYYA CHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHCCCEEEE TEKYKDIGNIFGLNLENYSDEECKYKIVSFLSDLRKSIGITGTIGTLGVTKKEIPSLSIN HHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHCCCEEEE AFNDPCIVTNPRTATLNDIEMVYKNAL CCCCCEEEECCCCCCHHHHHHHHHCCC >Mature Secondary Structure MKKSYNFLRKIVIPEFVYGIGAISLVGHYAKNFGAKKALIVTDLGVLKAGILKNVTLSLE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHEEEEEE SEKISYIIFSDVSENPRIYEVEKGASVYEKNNCDIIIAVGGGSPIDCAKTIGITYTNKKN CCEEEEEEEECCCCCCCEEEEECCCCEEECCCCEEEEEECCCCCCCHHHEEEEEECCCCC PLEFIGVDEVDIPGPPLICIPTTSGSSADVSQFAILNDNSKNVKLAIISKSVVSDVSIID CEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCEEEEEEEEHHHHCCCEEEC PKTTITMTERLTAATGMDALSHAVEAYVSNASSSITDLHALAAMPLIVNNIMPAIKDPEN CCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC LEYRSNMMLGSLYAGIAFSNASLGLTHAMAHSLGGLLDLPHGICNSLLLEHVVDFNYYYA CHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHCCCEEEE TEKYKDIGNIFGLNLENYSDEECKYKIVSFLSDLRKSIGITGTIGTLGVTKKEIPSLSIN HHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHCCCEEEE AFNDPCIVTNPRTATLNDIEMVYKNAL CCCCCEEEECCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3584063; 2308827; 2935393 [H]