Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is 150398900

Identifier: 150398900

GI number: 150398900

Start: 164124

End: 165425

Strand: Reverse

Name: 150398900

Synonym: Mevan_0144

Alternate gene names: NA

Gene position: 165425-164124 (Counterclockwise)

Preceding gene: 150398901

Following gene: 150398899

Centisome position: 9.62

GC content: 28.42

Gene sequence:

>1302_bases
ATGAAAAAAGTAGAACCTATTTCAAGCGAGTGTATCTCAAAATTAAAGAATTACTCCTGTAAATTAGAATTAATTATTGA
AAATTTACCCGGAATGGTCTTTTGGTGTAAAAATGACCCTGAGTGGACCATGGATTTTGTAAGTAGGGGATGTTTTGAAC
TTTTAGGTTATGAACCTGAAGAATTAACCAAAAAAATTTCATTTGGGTCTTTAATCCATCCTGAGGACAGAAATTTTGTT
CGAGATACCATTAATAAAAATTTAGAGCCAAATAAAAAATTAACATTAGAATATAGGGTTATCTGTAAAGATGGTACTAT
GAAATGGGTTTTAGAAAATAGTCAAGGCATATTTTCAGAAAATAAAAAATTTATTGGAATAGAAGGATTTATTACTGATA
TTACAGGTATTAAAGGCACAGAAAAATCTCTTAAAAAAAGTGAAAAGTATTCACGTAAAATTGTTGAACTAATACCTGAT
TTAATTATTATGTCAAATAAAAATGGCGACTATTTAGATATAATATCGTCAGAAAACCACGAACTTCCAATGCCAAAAAG
TAGAGTAATTGGAAAAAATATTAGGGATGTATTACCTGTTAATGATGCTAAAAATGTAATTGATTCAATTGAAAAGTGCA
TTAATGAAAATTCAATCCAAACTGTCGAATACAGTCTTGAACTAAATTCTAAAACTCATTTTTATGAAGCTAGGATAATT
TCTATGGGTCACAATAATGTATTTGCACTTATTAGGGATATCACTAGCAGAAAAGAAATGGAAAAAGCAGTTAAAGAAAA
TGAAACAAAATTTAAAAGTATTATTCAGTCTTCTCCAAATGGGTTTTATTTATACCGCCTTATTGGGGATGAACTCATTT
TTACGTGTGCAAATCCAGCAGCCGATAAAATTTTAGCACTTGATCATGACGAATTAGTTGAAAAAACCATTGAAGAAGCA
TTTCCGGGACTTAAAGATACGTTTGTTCCAGAACTTTATAAAAAAATAGCAAAAAAAGAACTTGGGAATCAGACTTTTCA
AATATCATACTATGTTAATGATATATTAAGATATTTTGATGTCAGAGCATTTCAAACACTTGAAAACAGTATTGCAGTTA
GTTTTGTAGATGTAACTGAAAAAAAACTTGCTGAAGAATCCCTTAAAAAAAGAAATGAAGAATTAGAAAGATTTGAAAGG
GTAGTTATAGAAAGGGAATTAAAAATGATTGAATTAAAAGAAAAAATCAGTAAACTTGAAAAGAAATTAAAAGAGGCTGG
TTTTAATGAAAAAATCCTATAA

Upstream 100 bases:

>100_bases
GAAAATTATTAATTTTAGTAGTGCATTATTATTAGTATATTGTATTAAAACAGCTGACTGTTAAAACTAATTTTTACCCC
CTCCAGAAAAAGGCATTTTT

Downstream 100 bases:

>100_bases
TTTCTTACGAAAAATAGTTATACCTGAATTTGTGTATGGAATTGGTGCAATATCTTTAGTTGGGCACTACGCTAAAAATT
TTGGTGCAAAAAAAGCCCTT

Product: putative PAS/PAC sensor protein

Products: NA

Alternate protein names: PAS/PAC Sensor Protein; Multi-Sensor Signal Transduction Histidine Kinase; PAS/PAC Sensor Signal Transduction Histidine Kinase; PAS/PAC Sensor Hybrid Histidine Kinase; Signal Transduction Histidine Kinase; PAS Fold Family; Sensory Transduction Histidine Kinase; Diguanylate Cyclase With PAS/PAC Sensor; PAS Sensor Protein; Sensory Box Histidine Kinase; Two-Component Hybrid Sensor And Regulator; Two-Component Sensor Histidine Kinase; Sensory Box Histidine Kinase/Response Regulator; Sensor Protein; Two-Component Member Protein; HTR-Like Protein; Histidine Kinase; Signal Transduction Protein; Signaling Protein; Sensory Box/GGDEF Family Protein; Two-Component System Sensor Histidine Kinase; Sensory Box Sensor Histidine Kinase; Response Regulator-Like Protein; Diguanylate Cyclase/Phosphodiesterase With PAS/PAC Sensor; Signal-Transducing Histidine Kinase/Response Regulator; Transducer Protein Htr; Signal-Transducing Histidine Kinase; Diguanylate Cyclase/Phosphodiesterase; Integral Membrane Sensor Protein; Signaling GGDEF/EAL Domain-Containing Protein; Two-Component Sensor Histidine Kinase Protein; Sensory Transduction Protein Kinase; Transport/Signal Transduction System Protein; Two Component Sensor Histidine Kinase; Pas Domain S-Box; Pas Sensor Protein; Sporulation Kinase; Metal Dependent Phosphohydrolase; Diguanylate Cyclase And Metal Dependent Phosphohydrolase; Sensory Box Protein; Sigma-54 Dependent Trancsriptional Regulator; Signal Transduction Histidine Kinase-Like Protein; Sigma54 Specific Transcriptional Regulator Fis Family; Two Component System Histidine Kinase; PAS Domain-Containing Protein; PAS Domain S-Box Domain-Containing Protein; Light And Oxygen Sensing Histidine Kinase; PAS Domain S-Box; Sensory Protein; PAS Domain S-Box Protein; Diguanylate Cyclase With PAS/PAC And GAF Sensors

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MKKVEPISSECISKLKNYSCKLELIIENLPGMVFWCKNDPEWTMDFVSRGCFELLGYEPEELTKKISFGSLIHPEDRNFV
RDTINKNLEPNKKLTLEYRVICKDGTMKWVLENSQGIFSENKKFIGIEGFITDITGIKGTEKSLKKSEKYSRKIVELIPD
LIIMSNKNGDYLDIISSENHELPMPKSRVIGKNIRDVLPVNDAKNVIDSIEKCINENSIQTVEYSLELNSKTHFYEARII
SMGHNNVFALIRDITSRKEMEKAVKENETKFKSIIQSSPNGFYLYRLIGDELIFTCANPAADKILALDHDELVEKTIEEA
FPGLKDTFVPELYKKIAKKELGNQTFQISYYVNDILRYFDVRAFQTLENSIAVSFVDVTEKKLAEESLKKRNEELERFER
VVIERELKMIELKEKISKLEKKLKEAGFNEKIL

Sequences:

>Translated_433_residues
MKKVEPISSECISKLKNYSCKLELIIENLPGMVFWCKNDPEWTMDFVSRGCFELLGYEPEELTKKISFGSLIHPEDRNFV
RDTINKNLEPNKKLTLEYRVICKDGTMKWVLENSQGIFSENKKFIGIEGFITDITGIKGTEKSLKKSEKYSRKIVELIPD
LIIMSNKNGDYLDIISSENHELPMPKSRVIGKNIRDVLPVNDAKNVIDSIEKCINENSIQTVEYSLELNSKTHFYEARII
SMGHNNVFALIRDITSRKEMEKAVKENETKFKSIIQSSPNGFYLYRLIGDELIFTCANPAADKILALDHDELVEKTIEEA
FPGLKDTFVPELYKKIAKKELGNQTFQISYYVNDILRYFDVRAFQTLENSIAVSFVDVTEKKLAEESLKKRNEELERFER
VVIERELKMIELKEKISKLEKKLKEAGFNEKIL
>Mature_433_residues
MKKVEPISSECISKLKNYSCKLELIIENLPGMVFWCKNDPEWTMDFVSRGCFELLGYEPEELTKKISFGSLIHPEDRNFV
RDTINKNLEPNKKLTLEYRVICKDGTMKWVLENSQGIFSENKKFIGIEGFITDITGIKGTEKSLKKSEKYSRKIVELIPD
LIIMSNKNGDYLDIISSENHELPMPKSRVIGKNIRDVLPVNDAKNVIDSIEKCINENSIQTVEYSLELNSKTHFYEARII
SMGHNNVFALIRDITSRKEMEKAVKENETKFKSIIQSSPNGFYLYRLIGDELIFTCANPAADKILALDHDELVEKTIEEA
FPGLKDTFVPELYKKIAKKELGNQTFQISYYVNDILRYFDVRAFQTLENSIAVSFVDVTEKKLAEESLKKRNEELERFER
VVIERELKMIELKEKISKLEKKLKEAGFNEKIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50134; Mature: 50134

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: PS50112 PAS ; PS50113 PAC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVEPISSECISKLKNYSCKLELIIENLPGMVFWCKNDPEWTMDFVSRGCFELLGYEPE
CCCCCCCHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCHH
ELTKKISFGSLIHPEDRNFVRDTINKNLEPNKKLTLEYRVICKDGTMKWVLENSQGIFSE
HHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEEEEEEECCCEEEEEECCCCCCCC
NKKFIGIEGFITDITGIKGTEKSLKKSEKYSRKIVELIPDLIIMSNKNGDYLDIISSENH
CCCEEEECHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCC
ELPMPKSRVIGKNIRDVLPVNDAKNVIDSIEKCINENSIQTVEYSLELNSKTHFYEARII
CCCCCHHHHHCCCHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEEEE
SMGHNNVFALIRDITSRKEMEKAVKENETKFKSIIQSSPNGFYLYRLIGDELIFTCANPA
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHEEEECCCC
ADKILALDHDELVEKTIEEAFPGLKDTFVPELYKKIAKKELGNQTFQISYYVNDILRYFD
CCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH
VRAFQTLENSIAVSFVDVTEKKLAEESLKKRNEELERFERVVIERELKMIELKEKISKLE
HHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKLKEAGFNEKIL
HHHHHCCCCCCCC
>Mature Secondary Structure
MKKVEPISSECISKLKNYSCKLELIIENLPGMVFWCKNDPEWTMDFVSRGCFELLGYEPE
CCCCCCCHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCHH
ELTKKISFGSLIHPEDRNFVRDTINKNLEPNKKLTLEYRVICKDGTMKWVLENSQGIFSE
HHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEEEEEEECCCEEEEEECCCCCCCC
NKKFIGIEGFITDITGIKGTEKSLKKSEKYSRKIVELIPDLIIMSNKNGDYLDIISSENH
CCCEEEECHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCC
ELPMPKSRVIGKNIRDVLPVNDAKNVIDSIEKCINENSIQTVEYSLELNSKTHFYEARII
CCCCCHHHHHCCCHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEEEE
SMGHNNVFALIRDITSRKEMEKAVKENETKFKSIIQSSPNGFYLYRLIGDELIFTCANPA
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHEEEECCCC
ADKILALDHDELVEKTIEEAFPGLKDTFVPELYKKIAKKELGNQTFQISYYVNDILRYFD
CCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH
VRAFQTLENSIAVSFVDVTEKKLAEESLKKRNEELERFERVVIERELKMIELKEKISKLE
HHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKLKEAGFNEKIL
HHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA