| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
Click here to switch to the map view.
The map label for this gene is 150398900
Identifier: 150398900
GI number: 150398900
Start: 164124
End: 165425
Strand: Reverse
Name: 150398900
Synonym: Mevan_0144
Alternate gene names: NA
Gene position: 165425-164124 (Counterclockwise)
Preceding gene: 150398901
Following gene: 150398899
Centisome position: 9.62
GC content: 28.42
Gene sequence:
>1302_bases ATGAAAAAAGTAGAACCTATTTCAAGCGAGTGTATCTCAAAATTAAAGAATTACTCCTGTAAATTAGAATTAATTATTGA AAATTTACCCGGAATGGTCTTTTGGTGTAAAAATGACCCTGAGTGGACCATGGATTTTGTAAGTAGGGGATGTTTTGAAC TTTTAGGTTATGAACCTGAAGAATTAACCAAAAAAATTTCATTTGGGTCTTTAATCCATCCTGAGGACAGAAATTTTGTT CGAGATACCATTAATAAAAATTTAGAGCCAAATAAAAAATTAACATTAGAATATAGGGTTATCTGTAAAGATGGTACTAT GAAATGGGTTTTAGAAAATAGTCAAGGCATATTTTCAGAAAATAAAAAATTTATTGGAATAGAAGGATTTATTACTGATA TTACAGGTATTAAAGGCACAGAAAAATCTCTTAAAAAAAGTGAAAAGTATTCACGTAAAATTGTTGAACTAATACCTGAT TTAATTATTATGTCAAATAAAAATGGCGACTATTTAGATATAATATCGTCAGAAAACCACGAACTTCCAATGCCAAAAAG TAGAGTAATTGGAAAAAATATTAGGGATGTATTACCTGTTAATGATGCTAAAAATGTAATTGATTCAATTGAAAAGTGCA TTAATGAAAATTCAATCCAAACTGTCGAATACAGTCTTGAACTAAATTCTAAAACTCATTTTTATGAAGCTAGGATAATT TCTATGGGTCACAATAATGTATTTGCACTTATTAGGGATATCACTAGCAGAAAAGAAATGGAAAAAGCAGTTAAAGAAAA TGAAACAAAATTTAAAAGTATTATTCAGTCTTCTCCAAATGGGTTTTATTTATACCGCCTTATTGGGGATGAACTCATTT TTACGTGTGCAAATCCAGCAGCCGATAAAATTTTAGCACTTGATCATGACGAATTAGTTGAAAAAACCATTGAAGAAGCA TTTCCGGGACTTAAAGATACGTTTGTTCCAGAACTTTATAAAAAAATAGCAAAAAAAGAACTTGGGAATCAGACTTTTCA AATATCATACTATGTTAATGATATATTAAGATATTTTGATGTCAGAGCATTTCAAACACTTGAAAACAGTATTGCAGTTA GTTTTGTAGATGTAACTGAAAAAAAACTTGCTGAAGAATCCCTTAAAAAAAGAAATGAAGAATTAGAAAGATTTGAAAGG GTAGTTATAGAAAGGGAATTAAAAATGATTGAATTAAAAGAAAAAATCAGTAAACTTGAAAAGAAATTAAAAGAGGCTGG TTTTAATGAAAAAATCCTATAA
Upstream 100 bases:
>100_bases GAAAATTATTAATTTTAGTAGTGCATTATTATTAGTATATTGTATTAAAACAGCTGACTGTTAAAACTAATTTTTACCCC CTCCAGAAAAAGGCATTTTT
Downstream 100 bases:
>100_bases TTTCTTACGAAAAATAGTTATACCTGAATTTGTGTATGGAATTGGTGCAATATCTTTAGTTGGGCACTACGCTAAAAATT TTGGTGCAAAAAAAGCCCTT
Product: putative PAS/PAC sensor protein
Products: NA
Alternate protein names: PAS/PAC Sensor Protein; Multi-Sensor Signal Transduction Histidine Kinase; PAS/PAC Sensor Signal Transduction Histidine Kinase; PAS/PAC Sensor Hybrid Histidine Kinase; Signal Transduction Histidine Kinase; PAS Fold Family; Sensory Transduction Histidine Kinase; Diguanylate Cyclase With PAS/PAC Sensor; PAS Sensor Protein; Sensory Box Histidine Kinase; Two-Component Hybrid Sensor And Regulator; Two-Component Sensor Histidine Kinase; Sensory Box Histidine Kinase/Response Regulator; Sensor Protein; Two-Component Member Protein; HTR-Like Protein; Histidine Kinase; Signal Transduction Protein; Signaling Protein; Sensory Box/GGDEF Family Protein; Two-Component System Sensor Histidine Kinase; Sensory Box Sensor Histidine Kinase; Response Regulator-Like Protein; Diguanylate Cyclase/Phosphodiesterase With PAS/PAC Sensor; Signal-Transducing Histidine Kinase/Response Regulator; Transducer Protein Htr; Signal-Transducing Histidine Kinase; Diguanylate Cyclase/Phosphodiesterase; Integral Membrane Sensor Protein; Signaling GGDEF/EAL Domain-Containing Protein; Two-Component Sensor Histidine Kinase Protein; Sensory Transduction Protein Kinase; Transport/Signal Transduction System Protein; Two Component Sensor Histidine Kinase; Pas Domain S-Box; Pas Sensor Protein; Sporulation Kinase; Metal Dependent Phosphohydrolase; Diguanylate Cyclase And Metal Dependent Phosphohydrolase; Sensory Box Protein; Sigma-54 Dependent Trancsriptional Regulator; Signal Transduction Histidine Kinase-Like Protein; Sigma54 Specific Transcriptional Regulator Fis Family; Two Component System Histidine Kinase; PAS Domain-Containing Protein; PAS Domain S-Box Domain-Containing Protein; Light And Oxygen Sensing Histidine Kinase; PAS Domain S-Box; Sensory Protein; PAS Domain S-Box Protein; Diguanylate Cyclase With PAS/PAC And GAF Sensors
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MKKVEPISSECISKLKNYSCKLELIIENLPGMVFWCKNDPEWTMDFVSRGCFELLGYEPEELTKKISFGSLIHPEDRNFV RDTINKNLEPNKKLTLEYRVICKDGTMKWVLENSQGIFSENKKFIGIEGFITDITGIKGTEKSLKKSEKYSRKIVELIPD LIIMSNKNGDYLDIISSENHELPMPKSRVIGKNIRDVLPVNDAKNVIDSIEKCINENSIQTVEYSLELNSKTHFYEARII SMGHNNVFALIRDITSRKEMEKAVKENETKFKSIIQSSPNGFYLYRLIGDELIFTCANPAADKILALDHDELVEKTIEEA FPGLKDTFVPELYKKIAKKELGNQTFQISYYVNDILRYFDVRAFQTLENSIAVSFVDVTEKKLAEESLKKRNEELERFER VVIERELKMIELKEKISKLEKKLKEAGFNEKIL
Sequences:
>Translated_433_residues MKKVEPISSECISKLKNYSCKLELIIENLPGMVFWCKNDPEWTMDFVSRGCFELLGYEPEELTKKISFGSLIHPEDRNFV RDTINKNLEPNKKLTLEYRVICKDGTMKWVLENSQGIFSENKKFIGIEGFITDITGIKGTEKSLKKSEKYSRKIVELIPD LIIMSNKNGDYLDIISSENHELPMPKSRVIGKNIRDVLPVNDAKNVIDSIEKCINENSIQTVEYSLELNSKTHFYEARII SMGHNNVFALIRDITSRKEMEKAVKENETKFKSIIQSSPNGFYLYRLIGDELIFTCANPAADKILALDHDELVEKTIEEA FPGLKDTFVPELYKKIAKKELGNQTFQISYYVNDILRYFDVRAFQTLENSIAVSFVDVTEKKLAEESLKKRNEELERFER VVIERELKMIELKEKISKLEKKLKEAGFNEKIL >Mature_433_residues MKKVEPISSECISKLKNYSCKLELIIENLPGMVFWCKNDPEWTMDFVSRGCFELLGYEPEELTKKISFGSLIHPEDRNFV RDTINKNLEPNKKLTLEYRVICKDGTMKWVLENSQGIFSENKKFIGIEGFITDITGIKGTEKSLKKSEKYSRKIVELIPD LIIMSNKNGDYLDIISSENHELPMPKSRVIGKNIRDVLPVNDAKNVIDSIEKCINENSIQTVEYSLELNSKTHFYEARII SMGHNNVFALIRDITSRKEMEKAVKENETKFKSIIQSSPNGFYLYRLIGDELIFTCANPAADKILALDHDELVEKTIEEA FPGLKDTFVPELYKKIAKKELGNQTFQISYYVNDILRYFDVRAFQTLENSIAVSFVDVTEKKLAEESLKKRNEELERFER VVIERELKMIELKEKISKLEKKLKEAGFNEKIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50134; Mature: 50134
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: PS50112 PAS ; PS50113 PAC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVEPISSECISKLKNYSCKLELIIENLPGMVFWCKNDPEWTMDFVSRGCFELLGYEPE CCCCCCCHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCHH ELTKKISFGSLIHPEDRNFVRDTINKNLEPNKKLTLEYRVICKDGTMKWVLENSQGIFSE HHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEEEEEEECCCEEEEEECCCCCCCC NKKFIGIEGFITDITGIKGTEKSLKKSEKYSRKIVELIPDLIIMSNKNGDYLDIISSENH CCCEEEECHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCC ELPMPKSRVIGKNIRDVLPVNDAKNVIDSIEKCINENSIQTVEYSLELNSKTHFYEARII CCCCCHHHHHCCCHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEEEE SMGHNNVFALIRDITSRKEMEKAVKENETKFKSIIQSSPNGFYLYRLIGDELIFTCANPA EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHEEEECCCC ADKILALDHDELVEKTIEEAFPGLKDTFVPELYKKIAKKELGNQTFQISYYVNDILRYFD CCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH VRAFQTLENSIAVSFVDVTEKKLAEESLKKRNEELERFERVVIERELKMIELKEKISKLE HHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKLKEAGFNEKIL HHHHHCCCCCCCC >Mature Secondary Structure MKKVEPISSECISKLKNYSCKLELIIENLPGMVFWCKNDPEWTMDFVSRGCFELLGYEPE CCCCCCCHHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHCCCHH ELTKKISFGSLIHPEDRNFVRDTINKNLEPNKKLTLEYRVICKDGTMKWVLENSQGIFSE HHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEEEEEEECCCEEEEEECCCCCCCC NKKFIGIEGFITDITGIKGTEKSLKKSEKYSRKIVELIPDLIIMSNKNGDYLDIISSENH CCCEEEECHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCC ELPMPKSRVIGKNIRDVLPVNDAKNVIDSIEKCINENSIQTVEYSLELNSKTHFYEARII CCCCCHHHHHCCCHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEEEE SMGHNNVFALIRDITSRKEMEKAVKENETKFKSIIQSSPNGFYLYRLIGDELIFTCANPA EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHEEEECCCC ADKILALDHDELVEKTIEEAFPGLKDTFVPELYKKIAKKELGNQTFQISYYVNDILRYFD CCCEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH VRAFQTLENSIAVSFVDVTEKKLAEESLKKRNEELERFERVVIERELKMIELKEKISKLE HHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKLKEAGFNEKIL HHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA