| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
Click here to switch to the map view.
The map label for this gene is 150398786
Identifier: 150398786
GI number: 150398786
Start: 23135
End: 23485
Strand: Reverse
Name: 150398786
Synonym: Mevan_0026
Alternate gene names: NA
Gene position: 23485-23135 (Counterclockwise)
Preceding gene: 150398787
Following gene: 150398785
Centisome position: 1.37
GC content: 27.64
Gene sequence:
>351_bases ATGACTGAAAAGGACTGGATAGAAACTGGGATATTAATATTTGAATCAGAAGACCCTGATTTTGAAAAAGCCGTTTACTG TTTTAAAAAAGCATTGAAAAAAAATTCTAAAAATTCTGAAACTTGGAATCTGCTTGGAAAATCGTATTATCGATTAAAAA ATGATGAAATGGCCCTTCAATGTTTAGAAAAAGCATTAGAAATTGATTCAAATAACCACAATATATGGATAGATAAAGGG ACCATTCTTGCAAATAAAAATCTAAAAGAAGCTTCAAAATGCTTTGAAAAAGCACTTGAACTAGATCATACTTCAAACAA ACTAAATAAAATAATAAATGCTTTTAAATAG
Upstream 100 bases:
>100_bases TTTTTTACCTACACAATAATTATTTATTTTGAAAATATAATATATGAATTAAAATAAATTAAATATATTCAGAATAAAAA TACGTCGAAATGTGGGTAAA
Downstream 100 bases:
>100_bases TTAAAAAACCATAATTTATCCAGTGAAAAAATGAATAACAATTCAGGAATTCAAAAATGGCACAGTCATGCAGTACTCCT CATTAATTCTAAAAAATATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MTEKDWIETGILIFESEDPDFEKAVYCFKKALKKNSKNSETWNLLGKSYYRLKNDEMALQCLEKALEIDSNNHNIWIDKG TILANKNLKEASKCFEKALELDHTSNKLNKIINAFK
Sequences:
>Translated_116_residues MTEKDWIETGILIFESEDPDFEKAVYCFKKALKKNSKNSETWNLLGKSYYRLKNDEMALQCLEKALEIDSNNHNIWIDKG TILANKNLKEASKCFEKALELDHTSNKLNKIINAFK >Mature_115_residues TEKDWIETGILIFESEDPDFEKAVYCFKKALKKNSKNSETWNLLGKSYYRLKNDEMALQCLEKALEIDSNNHNIWIDKGT ILANKNLKEASKCFEKALELDHTSNKLNKIINAFK
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13505; Mature: 13373
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEKDWIETGILIFESEDPDFEKAVYCFKKALKKNSKNSETWNLLGKSYYRLKNDEMALQ CCCCHHHHHCEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHH CLEKALEIDSNNHNIWIDKGTILANKNLKEASKCFEKALELDHTSNKLNKIINAFK HHHHHHHCCCCCCEEEEECCEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCC >Mature Secondary Structure TEKDWIETGILIFESEDPDFEKAVYCFKKALKKNSKNSETWNLLGKSYYRLKNDEMALQ CCCHHHHHCEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHH CLEKALEIDSNNHNIWIDKGTILANKNLKEASKCFEKALELDHTSNKLNKIINAFK HHHHHHHCCCCCCEEEEECCEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA