| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is hisE [H]
Identifier: 150398450
GI number: 150398450
Start: 3439147
End: 3439470
Strand: Reverse
Name: hisE [H]
Synonym: Smed_3258
Alternate gene names: 150398450
Gene position: 3439470-3439147 (Counterclockwise)
Preceding gene: 150398451
Following gene: 150398449
Centisome position: 90.95
GC content: 59.57
Gene sequence:
>324_bases ATGACAGAGTTCACCCTCTCCGATCTGGAGAAGATCGTGGCGACCCGCGCCAGGGCGGCTCCGGAGGAGTCCTGGACTGC CAAGCTGGTCGCTGCCGGACAGAAGAAGGCAGCCAAGAAGCTGGGAGAGGAAGCCGTCGAAACGGTCATCGCGGCGATCG GCGATGACCGGAAGAATCTGGTCGATGAGAGTGCCGATCTCCTCTATCATCTTATGGTCGTATTGAATATCGCCGCCATC CCGTTACAGGATGTGATGAGCGAACTGGCCAGGCGGACGAGCCAGTCCGGCCTGCAGGAAAAGGCGAACCGGCAGAATCC ATGA
Upstream 100 bases:
>100_bases TCACTTCGGAACATACAGCATCGGTGAGGCGAAGCGCCACATGGCCGAGCACGGCGTCGCCATGCGTCTCGATTGAAGCG GCCACGAGAAGGGATAGACC
Downstream 100 bases:
>100_bases GCATCGCCGCGAAAGACATCGAACCGGCCGACATTCCGGGCAATCTTCAGGGGGGCGAATATTCGCCCTATCACGTCTTC TCCGCGGAGGAATGGTCGCG
Product: phosphoribosyl-ATP pyrophosphatase
Products: NA
Alternate protein names: PRA-PH [H]
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MTEFTLSDLEKIVATRARAAPEESWTAKLVAAGQKKAAKKLGEEAVETVIAAIGDDRKNLVDESADLLYHLMVVLNIAAI PLQDVMSELARRTSQSGLQEKANRQNP
Sequences:
>Translated_107_residues MTEFTLSDLEKIVATRARAAPEESWTAKLVAAGQKKAAKKLGEEAVETVIAAIGDDRKNLVDESADLLYHLMVVLNIAAI PLQDVMSELARRTSQSGLQEKANRQNP >Mature_106_residues TEFTLSDLEKIVATRARAAPEESWTAKLVAAGQKKAAKKLGEEAVETVIAAIGDDRKNLVDESADLLYHLMVVLNIAAIP LQDVMSELARRTSQSGLQEKANRQNP
Specific function: Histidine biosynthesis; second step. Histidine biosynthesis; third step. [C]
COG id: COG0140
COG function: function code E; Phosphoribosyl-ATP pyrophosphohydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PRA-PH family [H]
Homologues:
Organism=Escherichia coli, GI2367128, Length=87, Percent_Identity=47.1264367816092, Blast_Score=82, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008179 - InterPro: IPR021130 [H]
Pfam domain/function: PF01503 PRA-PH [H]
EC number: =3.6.1.31 [H]
Molecular weight: Translated: 11660; Mature: 11529
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEFTLSDLEKIVATRARAAPEESWTAKLVAAGQKKAAKKLGEEAVETVIAAIGDDRKNL CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH VDESADLLYHLMVVLNIAAIPLQDVMSELARRTSQSGLQEKANRQNP HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TEFTLSDLEKIVATRARAAPEESWTAKLVAAGQKKAAKKLGEEAVETVIAAIGDDRKNL CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH VDESADLLYHLMVVLNIAAIPLQDVMSELARRTSQSGLQEKANRQNP HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]