| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is divL [H]
Identifier: 150398438
GI number: 150398438
Start: 3425870
End: 3428350
Strand: Reverse
Name: divL [H]
Synonym: Smed_3246
Alternate gene names: 150398438
Gene position: 3428350-3425870 (Counterclockwise)
Preceding gene: 150398439
Following gene: 150398437
Centisome position: 90.65
GC content: 63.4
Gene sequence:
>2481_bases GTGAAAACACATCTATCCAGGACTTCTGCAAAACGGCAGGGGGCGCCGAGACTCATAAGGCGGCTCCTTGCGGGGACGGT ACTGCTCACGGCAAGCGATGCCGCTGCTCAGGCCGCCGGCCCGGCCAGAAGCATATTCGGCACCCCCGAGGTCGTCACCT TCTCCGTGCTTATCGGGGTCATTTCCGCCGCCATGATTTCGGCGATCTGGCTCATCCGCCAGCGCGGAAACATAGAGGCC GAGAACCGCGATCTTCGCTCCAGCCTGTCCGACGCGAACCAGCATATTTCCCGCTTTCAGGCGCTAATCGCCGACAAGAA CAGGCGTATCGTGATCTGGGACGGGCTCGCAGATCGAGCCGAGTTCCTGGGGCATCTCCCGGTGGAGACCGGCGCACCAC AGGACGACCGCGACTTTCTCGCCTTCGGCCGCTGGGTCAAGCCGCATTCGGCGGGGCAGCTCGAAAAAGCGATCGAGGCT CTGCGCGCCCAGGCGCAAAGCTTCGACCTCGTGCTCGAGACCCAGCGCAACGAGGTCCTCGAGGCTCAGGGCCGCGTGTC GGGCGGGCGGGCCTTCGTTCGCTTCATCGCGCTCAACAATCTCAGGGCAGAGCTCGCCGAACTGAAGCTCGAACGCGACC AGCTGCACGCGTCCCTTTCAACATTCCGGACGCTGCTCGACGCGGTCGACCTTCCCGCCTGGCAGCGCGCAGGAGACGGC AGGCTCGAATGGGTCAACGCCGCCTATGCCAAGGCGGTGGAAACCCCGAGTGCGAGCCTTGCGGTCGCCGAAGAGAGGGA GCTGCTCGCGACGGCGGCTCGCGACCGGATCAGGGCGGTCGCGACCCTGCAGACGCCGTTCCGCGACAAGGTTTCCACAG TTGTGAGGGGCAACAGGACGTTCTTCGACGTCGTGGACGCCCGCACGCCGGCCGGCTCGGCTGGCATCGCGATCGACGTC TCCGGTATCGAAGCGGTGCGCGAGGAACTGGCCAGGACGCTCAAGAGCCATGCCGAAACGCTCGAGCACCTGGCAACGCC GGTGGCGATCTTCGACGGCAACCAGCGCCTGCAGTTCTACAATCAGGCATTCCAGCGGCTTTGGGATCTGGATATGGGAT TCCTCGAGCGTAAGCCGGACAATGGCGAGATGTTCGACCGCCTGCGCGACGGCGGCAAGCTGCCGGAGCAGCTCAATTGG AAACAATGGAAGGCGAATGCGCTTTCCGTCTATCAGGCGCTCGACACCCAGACCGATCTCTGGCACCTGCCGAACGGCCA GACGCTGCGCGTTTTCGCGACCGCACGGCCGCAGGGCGGCGCCACCTGGGTCTTCGAGAACCTGACGGAGAAGGTCGACC TCGAAACGCGGTATAACACGCTGGTCCAGGTCCAGGGCGAAACGATCGATCATCTCGCCGAGGGCGTCGCCGTTTTCGGA CCGGACGGCCGCATACGGTTGTCGAACCCGGCCTTCCGGGCGATCTGGGGCATCAACGAGACCGAGGCCCAGCCCGGCAC CCATATACGAGCGATCGAGCAGGCGTGCCTTGCTTCCTATGACCAGCAGGACGGCTGGAAGCGCTTCGCCCATATCATCA CCAGCTTCGATGATGAGCGGCCGTCGAGCCGCGGGATCCTGGAACTGCGCACCGGGCTGATCCTTGATTACGCGGTCATT CCGCTTCCGAACGCCCAGACGATGCTGACCTTCGTCAATATCACCGACAGCGTCCGCGTCGAGCGTGCGCTGACCGAGAA GAACGAAGCGCTGCGCAAGGCGGACGCGCTGAAGAACGATTTCGTGCACCATGTTTCCTACGAGCTGCGCTCGCCGCTGA CGAACATCATCGGTTTCGCCGACCTTCTGAAAACGCCGGTCTTCGGCGAACTCAACGAGCGCCAGGCGGAATATGTCGAT CACATCGCCACCTCTTCGTCGCTGCTTCTGACGATCGTCAACGACATTCTCGATCTCGCGACCGTCGATGCCGGTATCGT CGAGCTCGAGCTGGCCGAGGTGAACCTCATCGACCTCATCGACGACGTGACCCAGCAGATGGGCGATCGCCTGGTGGAGA GCGGCGTGTCGCTTCGAACCGATGCACCCGACAATCTCGGCCGAATCACCGCCGATCAGCAACGGCTAAAGCAGATTTTC ATAAAGCTACTGACCAATGCCGCGAATTTCGCGCCCGACGGGAGCACGATCGAGCTCAAATGCTGGCGCGAGGGGAGCGA CTTTGCCTTTTCCGTCACCGACACCGGGCCGGGCATCCCGCAGGACGTGCTCAACACCGTCTTCAACCGCTTCGAAAGCT ACGGCCAACGCGGCGGCGCCGGTCTGGGCCTCTCCATCGTCGAGAGCTTCGTCAGCCTTCACCACGGCAACGTGTCGATC CGCAGCAAGGAGGGTGAGGGCACCGAAGTCACCTGCCGCATTCCCTCCGCTCAAGCGCCGAAGGTCATTGCGGCGGAATA G
Upstream 100 bases:
>100_bases GACCGGAGATGGAATCGGAACTGACAGGGACCTTTGAACGGGTTCCGGCGCGCGGGGGCGCAAGGTCGCCGGCAATTTCC GGACGAACGGGGACGGCGCC
Downstream 100 bases:
>100_bases ATGTGATAAATGAAGTCGCTAGAATGCCTGCTGACGGACGAGGCCGCCACCAACGAATTCGGCGAGGACCTCGCATTGGC GCTGAAAGCCGGCGATTGCG
Product: histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 826; Mature: 826
Protein sequence:
>826_residues MKTHLSRTSAKRQGAPRLIRRLLAGTVLLTASDAAAQAAGPARSIFGTPEVVTFSVLIGVISAAMISAIWLIRQRGNIEA ENRDLRSSLSDANQHISRFQALIADKNRRIVIWDGLADRAEFLGHLPVETGAPQDDRDFLAFGRWVKPHSAGQLEKAIEA LRAQAQSFDLVLETQRNEVLEAQGRVSGGRAFVRFIALNNLRAELAELKLERDQLHASLSTFRTLLDAVDLPAWQRAGDG RLEWVNAAYAKAVETPSASLAVAEERELLATAARDRIRAVATLQTPFRDKVSTVVRGNRTFFDVVDARTPAGSAGIAIDV SGIEAVREELARTLKSHAETLEHLATPVAIFDGNQRLQFYNQAFQRLWDLDMGFLERKPDNGEMFDRLRDGGKLPEQLNW KQWKANALSVYQALDTQTDLWHLPNGQTLRVFATARPQGGATWVFENLTEKVDLETRYNTLVQVQGETIDHLAEGVAVFG PDGRIRLSNPAFRAIWGINETEAQPGTHIRAIEQACLASYDQQDGWKRFAHIITSFDDERPSSRGILELRTGLILDYAVI PLPNAQTMLTFVNITDSVRVERALTEKNEALRKADALKNDFVHHVSYELRSPLTNIIGFADLLKTPVFGELNERQAEYVD HIATSSSLLLTIVNDILDLATVDAGIVELELAEVNLIDLIDDVTQQMGDRLVESGVSLRTDAPDNLGRITADQQRLKQIF IKLLTNAANFAPDGSTIELKCWREGSDFAFSVTDTGPGIPQDVLNTVFNRFESYGQRGGAGLGLSIVESFVSLHHGNVSI RSKEGEGTEVTCRIPSAQAPKVIAAE
Sequences:
>Translated_826_residues MKTHLSRTSAKRQGAPRLIRRLLAGTVLLTASDAAAQAAGPARSIFGTPEVVTFSVLIGVISAAMISAIWLIRQRGNIEA ENRDLRSSLSDANQHISRFQALIADKNRRIVIWDGLADRAEFLGHLPVETGAPQDDRDFLAFGRWVKPHSAGQLEKAIEA LRAQAQSFDLVLETQRNEVLEAQGRVSGGRAFVRFIALNNLRAELAELKLERDQLHASLSTFRTLLDAVDLPAWQRAGDG RLEWVNAAYAKAVETPSASLAVAEERELLATAARDRIRAVATLQTPFRDKVSTVVRGNRTFFDVVDARTPAGSAGIAIDV SGIEAVREELARTLKSHAETLEHLATPVAIFDGNQRLQFYNQAFQRLWDLDMGFLERKPDNGEMFDRLRDGGKLPEQLNW KQWKANALSVYQALDTQTDLWHLPNGQTLRVFATARPQGGATWVFENLTEKVDLETRYNTLVQVQGETIDHLAEGVAVFG PDGRIRLSNPAFRAIWGINETEAQPGTHIRAIEQACLASYDQQDGWKRFAHIITSFDDERPSSRGILELRTGLILDYAVI PLPNAQTMLTFVNITDSVRVERALTEKNEALRKADALKNDFVHHVSYELRSPLTNIIGFADLLKTPVFGELNERQAEYVD HIATSSSLLLTIVNDILDLATVDAGIVELELAEVNLIDLIDDVTQQMGDRLVESGVSLRTDAPDNLGRITADQQRLKQIF IKLLTNAANFAPDGSTIELKCWREGSDFAFSVTDTGPGIPQDVLNTVFNRFESYGQRGGAGLGLSIVESFVSLHHGNVSI RSKEGEGTEVTCRIPSAQAPKVIAAE >Mature_826_residues MKTHLSRTSAKRQGAPRLIRRLLAGTVLLTASDAAAQAAGPARSIFGTPEVVTFSVLIGVISAAMISAIWLIRQRGNIEA ENRDLRSSLSDANQHISRFQALIADKNRRIVIWDGLADRAEFLGHLPVETGAPQDDRDFLAFGRWVKPHSAGQLEKAIEA LRAQAQSFDLVLETQRNEVLEAQGRVSGGRAFVRFIALNNLRAELAELKLERDQLHASLSTFRTLLDAVDLPAWQRAGDG RLEWVNAAYAKAVETPSASLAVAEERELLATAARDRIRAVATLQTPFRDKVSTVVRGNRTFFDVVDARTPAGSAGIAIDV SGIEAVREELARTLKSHAETLEHLATPVAIFDGNQRLQFYNQAFQRLWDLDMGFLERKPDNGEMFDRLRDGGKLPEQLNW KQWKANALSVYQALDTQTDLWHLPNGQTLRVFATARPQGGATWVFENLTEKVDLETRYNTLVQVQGETIDHLAEGVAVFG PDGRIRLSNPAFRAIWGINETEAQPGTHIRAIEQACLASYDQQDGWKRFAHIITSFDDERPSSRGILELRTGLILDYAVI PLPNAQTMLTFVNITDSVRVERALTEKNEALRKADALKNDFVHHVSYELRSPLTNIIGFADLLKTPVFGELNERQAEYVD HIATSSSLLLTIVNDILDLATVDAGIVELELAEVNLIDLIDDVTQQMGDRLVESGVSLRTDAPDNLGRITADQQRLKQIF IKLLTNAANFAPDGSTIELKCWREGSDFAFSVTDTGPGIPQDVLNTVFNRFESYGQRGGAGLGLSIVESFVSLHHGNVSI RSKEGEGTEVTCRIPSAQAPKVIAAE
Specific function: Required for cell division and growth. It catalyzes the phosphorylation of CtrA and activates transcription in vitro of the cell cycle-regulated fliF promoter [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI145693157, Length=262, Percent_Identity=33.969465648855, Blast_Score=126, Evalue=6e-30, Organism=Escherichia coli, GI1789149, Length=246, Percent_Identity=32.1138211382114, Blast_Score=102, Evalue=8e-23, Organism=Escherichia coli, GI48994928, Length=251, Percent_Identity=29.0836653386454, Blast_Score=101, Evalue=2e-22, Organism=Escherichia coli, GI87081816, Length=240, Percent_Identity=30.8333333333333, Blast_Score=95, Evalue=2e-20, Organism=Escherichia coli, GI1786912, Length=273, Percent_Identity=27.1062271062271, Blast_Score=95, Evalue=2e-20, Organism=Escherichia coli, GI1788393, Length=235, Percent_Identity=27.2340425531915, Blast_Score=95, Evalue=2e-20, Organism=Escherichia coli, GI1788713, Length=273, Percent_Identity=26.7399267399267, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1786600, Length=293, Percent_Identity=25.938566552901, Blast_Score=94, Evalue=4e-20, Organism=Escherichia coli, GI1790436, Length=270, Percent_Identity=28.5185185185185, Blast_Score=92, Evalue=2e-19, Organism=Escherichia coli, GI1790861, Length=239, Percent_Identity=28.8702928870293, Blast_Score=85, Evalue=2e-17, Organism=Escherichia coli, GI87082128, Length=239, Percent_Identity=25.9414225941423, Blast_Score=76, Evalue=7e-15, Organism=Escherichia coli, GI1786783, Length=272, Percent_Identity=26.4705882352941, Blast_Score=70, Evalue=6e-13, Organism=Escherichia coli, GI1788549, Length=235, Percent_Identity=22.9787234042553, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 91192; Mature: 91192
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: PS50109 HIS_KIN ; PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTHLSRTSAKRQGAPRLIRRLLAGTVLLTASDAAAQAAGPARSIFGTPEVVTFSVLIGV CCCCCCHHHHHHCCCHHHHHHHHHCEEEEEECCHHHHCCCCHHHHCCCCHHHHHHHHHHH ISAAMISAIWLIRQRGNIEAENRDLRSSLSDANQHISRFQALIADKNRRIVIWDGLADRA HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHH EFLGHLPVETGAPQDDRDFLAFGRWVKPHSAGQLEKAIEALRAQAQSFDLVLETQRNEVL HHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCHHHHH EAQGRVSGGRAFVRFIALNNLRAELAELKLERDQLHASLSTFRTLLDAVDLPAWQRAGDG HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCC RLEWVNAAYAKAVETPSASLAVAEERELLATAARDRIRAVATLQTPFRDKVSTVVRGNRT CEEEHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCE FFDVVDARTPAGSAGIAIDVSGIEAVREELARTLKSHAETLEHLATPVAIFDGNQRLQFY EEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHH NQAFQRLWDLDMGFLERKPDNGEMFDRLRDGGKLPEQLNWKQWKANALSVYQALDTQTDL HHHHHHHHHCCHHHHHCCCCCHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHCCCCCE WHLPNGQTLRVFATARPQGGATWVFENLTEKVDLETRYNTLVQVQGETIDHLAEGVAVFG EECCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCHHHCCEEEEECCCHHHHHHCCEEEEC PDGRIRLSNPAFRAIWGINETEAQPGTHIRAIEQACLASYDQQDGWKRFAHIITSFDDER CCCEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC PSSRGILELRTGLILDYAVIPLPNAQTMLTFVNITDSVRVERALTEKNEALRKADALKND CCCCCHHHHHHHHEEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH FVHHVSYELRSPLTNIIGFADLLKTPVFGELNERQAEYVDHIATSSSLLLTIVNDILDLA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH TVDAGIVELELAEVNLIDLIDDVTQQMGDRLVESGVSLRTDAPDNLGRITADQQRLKQIF HCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHH IKLLTNAANFAPDGSTIELKCWREGSDFAFSVTDTGPGIPQDVLNTVFNRFESYGQRGGA HHHHHHHHCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCC GLGLSIVESFVSLHHGNVSIRSKEGEGTEVTCRIPSAQAPKVIAAE CCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCCCCEECC >Mature Secondary Structure MKTHLSRTSAKRQGAPRLIRRLLAGTVLLTASDAAAQAAGPARSIFGTPEVVTFSVLIGV CCCCCCHHHHHHCCCHHHHHHHHHCEEEEEECCHHHHCCCCHHHHCCCCHHHHHHHHHHH ISAAMISAIWLIRQRGNIEAENRDLRSSLSDANQHISRFQALIADKNRRIVIWDGLADRA HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHH EFLGHLPVETGAPQDDRDFLAFGRWVKPHSAGQLEKAIEALRAQAQSFDLVLETQRNEVL HHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCHHHHH EAQGRVSGGRAFVRFIALNNLRAELAELKLERDQLHASLSTFRTLLDAVDLPAWQRAGDG HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCC RLEWVNAAYAKAVETPSASLAVAEERELLATAARDRIRAVATLQTPFRDKVSTVVRGNRT CEEEHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCE FFDVVDARTPAGSAGIAIDVSGIEAVREELARTLKSHAETLEHLATPVAIFDGNQRLQFY EEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHH NQAFQRLWDLDMGFLERKPDNGEMFDRLRDGGKLPEQLNWKQWKANALSVYQALDTQTDL HHHHHHHHHCCHHHHHCCCCCHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHCCCCCE WHLPNGQTLRVFATARPQGGATWVFENLTEKVDLETRYNTLVQVQGETIDHLAEGVAVFG EECCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCHHHCCEEEEECCCHHHHHHCCEEEEC PDGRIRLSNPAFRAIWGINETEAQPGTHIRAIEQACLASYDQQDGWKRFAHIITSFDDER CCCEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC PSSRGILELRTGLILDYAVIPLPNAQTMLTFVNITDSVRVERALTEKNEALRKADALKND CCCCCHHHHHHHHEEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH FVHHVSYELRSPLTNIIGFADLLKTPVFGELNERQAEYVDHIATSSSLLLTIVNDILDLA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH TVDAGIVELELAEVNLIDLIDDVTQQMGDRLVESGVSLRTDAPDNLGRITADQQRLKQIF HCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCHHHHHHHHHH IKLLTNAANFAPDGSTIELKCWREGSDFAFSVTDTGPGIPQDVLNTVFNRFESYGQRGGA HHHHHHHHCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCC GLGLSIVESFVSLHHGNVSIRSKEGEGTEVTCRIPSAQAPKVIAAE CCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10557274; 11259647 [H]