| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is ahcY [H]
Identifier: 150398439
GI number: 150398439
Start: 3428654
End: 3430054
Strand: Reverse
Name: ahcY [H]
Synonym: Smed_3247
Alternate gene names: 150398439
Gene position: 3430054-3428654 (Counterclockwise)
Preceding gene: 150398440
Following gene: 150398438
Centisome position: 90.7
GC content: 61.24
Gene sequence:
>1401_bases ATGAGCGCAAATCAGGACTATATCGTCGCCGACATCGGACTTGCCGATTTCGGCCGCAAGGAAATTGCCATCGCAGAAAC GGAAATGCCTGGTCTGATGGCCTGCCGTGAGGAGTTCGGTGCATCGAAGCCGCTGAAGGGCGCACGCATCACCGGCTCGC TCCACATGACGATCCAGACCGCGGTGCTGATCGAGACGCTGGTCGCTCTCGGTGCCGAAGTGCGTTGGGCGTCGTGCAAC ATCTTCTCGACACAGGACCACGCCGCAGCCGCGATCGCCGCGAGCGGCGTTCCCGTTTTCGCCGTCAAGGGTGAGACGCT CGAGGAATACTGGACCTATACCGACAAGATCTTCCAGTGGGCCGATGGCGGCGTCTCGAACATGATCCTCGACGACGGCG GCGACGCGACCATGTATATCCTGCTCGGCGCCCGCGCCGAGGCAGGCGAGAACATTCTGATCAATCCGGGCTCCGAAGAG GAAGAGATCCTTTTCGCACAGATCAAGAAGCGCCTCGCCGCGACGCCCGGCTGGTTCACCAAGCAGCGCGACGCGATCAA AGGCGTGACGGAAGAGACGACGACCGGCGTCAACCGCCTGTACCAGCTCCAGGCCAAGGGCCTGCTGCCCTTCCCGGCGA TCAACGTCAACGACAGCGTCACCAAGTCCAAGTTCGACAACAAATACGGCTGTAAGGAATCGCTCGTCGACGGCATCCGC CGCGGTACCGACGTGATGATGGCCGGCAAGGTCGCGGTGGTCTGCGGCTACGGCGACGTCGGCAAGGGCTCGGCCGCTTC GCTCAGCGGCGCCGGCGCACGCGTCAAGGTCACTGAAGTGGACCCGATCTGCGCCCTCCAGGCGGCCATGGACGGCTACG AAGTCGTTCAGCTCGAAGACGTCGTATCATCAGCGGACATCTTCATCACCACGACCGGCAACAAGGACGTCATCCGCATC GAGCACATGCGCGCGATGAAGGACATGGCGATCGTCGGCAATATCGGTCACTTCGACAACGAGATCCAGGTATCGGCGCT CCGTAACCTGAAGTGGACAAACGTCAAGCCGCAGGTCGATCTCATCGAGTTCCCGAAGGGCAATCGCATCATCCTGCTTT CGGAAGGCCGTCTGCTCAACCTCGGCAACGCCACCGGACATCCGTCCTTCGTCATGTCGGCTTCCTTCTCCAACCAGGTT CTGGCGCAGATCGAGCTCTTCACGAAGGGCGAGAACTACAAGAACGAGGTTTACGTGCTGCCGAAGCAGCTCGACGAGAA GGTGGCGCGACTGCATCTCGCCAAACTCGGCGCGAAGCTGACCGAGCTTTCGGAGGAACAGGCCGCCTATATCGGCGTGA AGGCGCAGGGTCCGTTCAAGGCCGAACACTACCGGTACTAA
Upstream 100 bases:
>100_bases TGATAGACCGAAGCCACGCTGCCCGCAACCGCGGGAGGCATTGTCACGCCGCCGAACGGCCATGGGGCCGCGCGGTCCTA GGATAAGCCTGGAGAACTTC
Downstream 100 bases:
>100_bases TCCTTACCCGGGCAATCCACAACATGTTGTGGCCGCGATCTTGACAAGAGATCGCGGCCGCTTTTTTGGGCCGCACACTT TCAGCCGAATCGTCAAAGAA
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase [H]
Number of amino acids: Translated: 466; Mature: 465
Protein sequence:
>466_residues MSANQDYIVADIGLADFGRKEIAIAETEMPGLMACREEFGASKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCN IFSTQDHAAAAIAASGVPVFAVKGETLEEYWTYTDKIFQWADGGVSNMILDDGGDATMYILLGARAEAGENILINPGSEE EEILFAQIKKRLAATPGWFTKQRDAIKGVTEETTTGVNRLYQLQAKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDGIR RGTDVMMAGKVAVVCGYGDVGKGSAASLSGAGARVKVTEVDPICALQAAMDGYEVVQLEDVVSSADIFITTTGNKDVIRI EHMRAMKDMAIVGNIGHFDNEIQVSALRNLKWTNVKPQVDLIEFPKGNRIILLSEGRLLNLGNATGHPSFVMSASFSNQV LAQIELFTKGENYKNEVYVLPKQLDEKVARLHLAKLGAKLTELSEEQAAYIGVKAQGPFKAEHYRY
Sequences:
>Translated_466_residues MSANQDYIVADIGLADFGRKEIAIAETEMPGLMACREEFGASKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCN IFSTQDHAAAAIAASGVPVFAVKGETLEEYWTYTDKIFQWADGGVSNMILDDGGDATMYILLGARAEAGENILINPGSEE EEILFAQIKKRLAATPGWFTKQRDAIKGVTEETTTGVNRLYQLQAKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDGIR RGTDVMMAGKVAVVCGYGDVGKGSAASLSGAGARVKVTEVDPICALQAAMDGYEVVQLEDVVSSADIFITTTGNKDVIRI EHMRAMKDMAIVGNIGHFDNEIQVSALRNLKWTNVKPQVDLIEFPKGNRIILLSEGRLLNLGNATGHPSFVMSASFSNQV LAQIELFTKGENYKNEVYVLPKQLDEKVARLHLAKLGAKLTELSEEQAAYIGVKAQGPFKAEHYRY >Mature_465_residues SANQDYIVADIGLADFGRKEIAIAETEMPGLMACREEFGASKPLKGARITGSLHMTIQTAVLIETLVALGAEVRWASCNI FSTQDHAAAAIAASGVPVFAVKGETLEEYWTYTDKIFQWADGGVSNMILDDGGDATMYILLGARAEAGENILINPGSEEE EILFAQIKKRLAATPGWFTKQRDAIKGVTEETTTGVNRLYQLQAKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDGIRR GTDVMMAGKVAVVCGYGDVGKGSAASLSGAGARVKVTEVDPICALQAAMDGYEVVQLEDVVSSADIFITTTGNKDVIRIE HMRAMKDMAIVGNIGHFDNEIQVSALRNLKWTNVKPQVDLIEFPKGNRIILLSEGRLLNLGNATGHPSFVMSASFSNQVL AQIELFTKGENYKNEVYVLPKQLDEKVARLHLAKLGAKLTELSEEQAAYIGVKAQGPFKAEHYRY
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine [H]
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family [H]
Homologues:
Organism=Homo sapiens, GI9951915, Length=468, Percent_Identity=58.3333333333333, Blast_Score=509, Evalue=1e-144, Organism=Homo sapiens, GI239937451, Length=440, Percent_Identity=58.1818181818182, Blast_Score=480, Evalue=1e-135, Organism=Homo sapiens, GI298286489, Length=466, Percent_Identity=50.4291845493562, Blast_Score=455, Evalue=1e-128, Organism=Homo sapiens, GI195539337, Length=466, Percent_Identity=50.8583690987124, Blast_Score=455, Evalue=1e-128, Organism=Homo sapiens, GI195539349, Length=466, Percent_Identity=50.4291845493562, Blast_Score=455, Evalue=1e-128, Organism=Homo sapiens, GI24308043, Length=466, Percent_Identity=50.8583690987124, Blast_Score=454, Evalue=1e-128, Organism=Homo sapiens, GI21361647, Length=466, Percent_Identity=48.9270386266094, Blast_Score=433, Evalue=1e-121, Organism=Caenorhabditis elegans, GI17506425, Length=465, Percent_Identity=59.7849462365591, Blast_Score=524, Evalue=1e-149, Organism=Saccharomyces cerevisiae, GI6320882, Length=484, Percent_Identity=57.4380165289256, Blast_Score=498, Evalue=1e-142, Organism=Drosophila melanogaster, GI24642172, Length=462, Percent_Identity=61.038961038961, Blast_Score=516, Evalue=1e-147, Organism=Drosophila melanogaster, GI24656245, Length=467, Percent_Identity=51.1777301927195, Blast_Score=451, Evalue=1e-127, Organism=Drosophila melanogaster, GI45553387, Length=463, Percent_Identity=50.755939524838, Blast_Score=436, Evalue=1e-122, Organism=Drosophila melanogaster, GI45553385, Length=462, Percent_Identity=50.6493506493506, Blast_Score=433, Evalue=1e-121,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 [H]
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD [H]
EC number: =3.3.1.1 [H]
Molecular weight: Translated: 50536; Mature: 50405
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: PS00738 ADOHCYASE_1 ; PS00739 ADOHCYASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSANQDYIVADIGLADFGRKEIAIAETEMPGLMACREEFGASKPLKGARITGSLHMTIQT CCCCCCEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEEEEEEHHH AVLIETLVALGAEVRWASCNIFSTQDHAAAAIAASGVPVFAVKGETLEEYWTYTDKIFQW HHHHHHHHHCCCCEEEEEEEEECCCCCHHHEEEECCCEEEEECCCHHHHHHHHHHHHHHH ADGGVSNMILDDGGDATMYILLGARAEAGENILINPGSEEEEILFAQIKKRLAATPGWFT CCCCCCEEEEECCCCEEEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCC KQRDAIKGVTEETTTGVNRLYQLQAKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDGIR CCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHH RGTDVMMAGKVAVVCGYGDVGKGSAASLSGAGARVKVTEVDPICALQAAMDGYEVVQLED CCCCEEEECCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCEEEEEEHH VVSSADIFITTTGNKDVIRIEHMRAMKDMAIVGNIGHFDNEIQVSALRNLKWTNVKPQVD HHCCCCEEEEECCCCCEEEEHHHHHHHHHEEEECCCCCCCEEEEEEHHCCEECCCCCCEE LIEFPKGNRIILLSEGRLLNLGNATGHPSFVMSASFSNQVLAQIELFTKGENYKNEVYVL EEECCCCCEEEEEECCCEEECCCCCCCCCEEEECCCCCCEEEEEEEEECCCCCCCEEEEE PKQLDEKVARLHLAKLGAKLTELSEEQAAYIGVKAQGPFKAEHYRY CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCC >Mature Secondary Structure SANQDYIVADIGLADFGRKEIAIAETEMPGLMACREEFGASKPLKGARITGSLHMTIQT CCCCCEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEEEEEEHHH AVLIETLVALGAEVRWASCNIFSTQDHAAAAIAASGVPVFAVKGETLEEYWTYTDKIFQW HHHHHHHHHCCCCEEEEEEEEECCCCCHHHEEEECCCEEEEECCCHHHHHHHHHHHHHHH ADGGVSNMILDDGGDATMYILLGARAEAGENILINPGSEEEEILFAQIKKRLAATPGWFT CCCCCCEEEEECCCCEEEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCC KQRDAIKGVTEETTTGVNRLYQLQAKGLLPFPAINVNDSVTKSKFDNKYGCKESLVDGIR CCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHH RGTDVMMAGKVAVVCGYGDVGKGSAASLSGAGARVKVTEVDPICALQAAMDGYEVVQLED CCCCEEEECCEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCEEEEEEHH VVSSADIFITTTGNKDVIRIEHMRAMKDMAIVGNIGHFDNEIQVSALRNLKWTNVKPQVD HHCCCCEEEEECCCCCEEEEHHHHHHHHHEEEECCCCCCCEEEEEEHHCCEECCCCCCEE LIEFPKGNRIILLSEGRLLNLGNATGHPSFVMSASFSNQVLAQIELFTKGENYKNEVYVL EEECCCCCEEEEEECCCEEECCCCCCCCCEEEECCCCCCEEEEEEEEECCCCCCCEEEEE PKQLDEKVARLHLAKLGAKLTELSEEQAAYIGVKAQGPFKAEHYRY CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA