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The map label for this gene is 150398382

Identifier: 150398382

GI number: 150398382

Start: 3360430

End: 3362136

Strand: Reverse

Name: 150398382

Synonym: Smed_3190

Alternate gene names: NA

Gene position: 3362136-3360430 (Counterclockwise)

Preceding gene: 150398383

Following gene: 150398381

Centisome position: 88.9

GC content: 63.8

Gene sequence:

>1707_bases
ATGAGGAACTTACGGGCGCCGATGCCGCTTTCCAATAAACCAAGGTTCCTATATCTGTACCTGCGCGAAGGCACACGGCG
GCTTGAGCGCCGGCTTTCGCTTGGCCGGACCGCGGCGCAGCGCTATGCCGGCTCAACGCCCGTCCGCCTCATCGTCGCGC
CGACGGACCTTCGCGCAATAGACCCATTCGTTGCGGAGGAGATCCTCGCAGGCCGGTTTCCGCTCGCCGGGCGGGTTCTG
GATACCGAAGGTGAGTCGGCTTTCGAGATCGATCTGCCGTCTTACGAATTCGCGATCCGCCTCCATTCCTTCGGCTGGCT
GCGTCACATGCGGGCAGTCCAGGATGAAGCCGGCTCGGCCAGGCTGCGCCAGATTGTCGACGACTGGATGGGGAGCCATG
GCCGAACTATCGGTGAAATCTCGTGGGACGCGGACGTGGTGGCACAGCGCGTCATCGCCTGGCTGTCCCACTCGCCGGTC
GTGCTGCGCAATGCCGAGCATGGCTTTTATCGCCGATTCCTGAAGAGCCTGGCCCTCCAGGTGCGTCATCTCCGGCATGT
TGCCGGGACCGTGCCCGATGGAGAGGCACGGCTGAGGGTTCGCCTTGCGCTCGCGATGGCCTCCGTCTCGATGCCGGCGA
CGGCTTCGGCGATCCGCAGGGCGTCCCGCAATCTCGATCTCGAGCTGGAACGGCAGATCCTCCCGGACGGAGCGCATTTC
TCCCGCAATCCACGGGCGGGGCTCGAGCTCCTGCTCGATCTGCTGCCGCTGCGTCAGACATATGTCAATCTCGGACACGA
CGTGCCTTCGAAGCTGATTTCCTGTATCGACCGCATGTATCCGGCGCTCCGCTTCTTCCGTCACCAAAGCGGCGAGCTCG
CCCTTTTCAACAGCGCGACATCCGTTGCTGCCCATGAGCTCGCCTCTGTGCTCAGATATGACGAGACCGCTGGCGAACCT
TTCCGATCGCTTCCGCATGCGCAATACGAACGCCTGTCGCTGGGTGAAACCGTCGTCATCGTGGACACCGGGCGGCCACT
ATCGGTCGATCTGTCGCGCAGTGCCCATGCAGGCTGTCTCTCTTTCGAGATGTCCTCCGGCCGGAATCGCTTCGTCATCA
ATTCCGGCGCGCCGAAATTCGCCGGCGATCGATTTCGGCAAATGGCGCGCACCACGGCAGCGCATTCCACTGTCACCCTG
AACGACAGATCCTCTTGCCGCTTCTCGCAGTCGCGATTCCTCGGTCCGATCGTGGCCGGGGGGCCGTCCCGCGTCGCGGT
CGAGAGGAAGGACGAGCCAGGCAGAATGGAGACGGTCAAGGCGAGCCATGACGGCTATGTTGCGCCCTTCGGACTGCTCC
ACGAGCGTGACATCGGAATACTCAATGGAGGCCGGCTGATTCGCGGTCGCGACCGCCTGTTGCTCGAGGACGGCGGCGAC
CCTGATCCGGAGGACGGCTCGATCGCCATCGCCCGATTCCACATTCATCCGGCGATCGGCATGCGCCGGCACAGCGAGAG
CGAAATATACCTGACGGCGCCCGACGGTGAGGCTTGGCTCTTCGCATGTCGGGACGGCAAGCTCGCCGTGGAGGAGGACA
TCTTCTTCGCCGATCCCTCCGGCGTGCGCGCCTCGTCGCAGATCACGGTGACTTTCGCCGCCGGCGACCAGCCCGAAATC
CAGTGGACTTTCACGCGGGCAGCATGA

Upstream 100 bases:

>100_bases
CTGCAGCCACTCAACAGCGACCTTTTCTGCGTTTCTGGAGACGCACGGTGCTGCGCCAGGCAATCCGCTAGGTGCTTTGC
GCTTCGAAGGTCTTGCAGTC

Downstream 100 bases:

>100_bases
TGGACGCTGCCGGGAACCGTCCAGACGGGCAATTCCACGCTCTGCGACACGCCGAAGGTTTCTTCCCGGATGAAGCTATG
CTAACGGGCAGCCAGCCCAA

Product: heparinase II/III family protein

Products: NA

Alternate protein names: Heparinase II/III-Like; Heparinase II/III-Like Protein; Heparinase II/III-Like Family Protein; Cytoplasmic Protein; Heparinase II/Iii Family Protein

Number of amino acids: Translated: 568; Mature: 568

Protein sequence:

>568_residues
MRNLRAPMPLSNKPRFLYLYLREGTRRLERRLSLGRTAAQRYAGSTPVRLIVAPTDLRAIDPFVAEEILAGRFPLAGRVL
DTEGESAFEIDLPSYEFAIRLHSFGWLRHMRAVQDEAGSARLRQIVDDWMGSHGRTIGEISWDADVVAQRVIAWLSHSPV
VLRNAEHGFYRRFLKSLALQVRHLRHVAGTVPDGEARLRVRLALAMASVSMPATASAIRRASRNLDLELERQILPDGAHF
SRNPRAGLELLLDLLPLRQTYVNLGHDVPSKLISCIDRMYPALRFFRHQSGELALFNSATSVAAHELASVLRYDETAGEP
FRSLPHAQYERLSLGETVVIVDTGRPLSVDLSRSAHAGCLSFEMSSGRNRFVINSGAPKFAGDRFRQMARTTAAHSTVTL
NDRSSCRFSQSRFLGPIVAGGPSRVAVERKDEPGRMETVKASHDGYVAPFGLLHERDIGILNGGRLIRGRDRLLLEDGGD
PDPEDGSIAIARFHIHPAIGMRRHSESEIYLTAPDGEAWLFACRDGKLAVEEDIFFADPSGVRASSQITVTFAAGDQPEI
QWTFTRAA

Sequences:

>Translated_568_residues
MRNLRAPMPLSNKPRFLYLYLREGTRRLERRLSLGRTAAQRYAGSTPVRLIVAPTDLRAIDPFVAEEILAGRFPLAGRVL
DTEGESAFEIDLPSYEFAIRLHSFGWLRHMRAVQDEAGSARLRQIVDDWMGSHGRTIGEISWDADVVAQRVIAWLSHSPV
VLRNAEHGFYRRFLKSLALQVRHLRHVAGTVPDGEARLRVRLALAMASVSMPATASAIRRASRNLDLELERQILPDGAHF
SRNPRAGLELLLDLLPLRQTYVNLGHDVPSKLISCIDRMYPALRFFRHQSGELALFNSATSVAAHELASVLRYDETAGEP
FRSLPHAQYERLSLGETVVIVDTGRPLSVDLSRSAHAGCLSFEMSSGRNRFVINSGAPKFAGDRFRQMARTTAAHSTVTL
NDRSSCRFSQSRFLGPIVAGGPSRVAVERKDEPGRMETVKASHDGYVAPFGLLHERDIGILNGGRLIRGRDRLLLEDGGD
PDPEDGSIAIARFHIHPAIGMRRHSESEIYLTAPDGEAWLFACRDGKLAVEEDIFFADPSGVRASSQITVTFAAGDQPEI
QWTFTRAA
>Mature_568_residues
MRNLRAPMPLSNKPRFLYLYLREGTRRLERRLSLGRTAAQRYAGSTPVRLIVAPTDLRAIDPFVAEEILAGRFPLAGRVL
DTEGESAFEIDLPSYEFAIRLHSFGWLRHMRAVQDEAGSARLRQIVDDWMGSHGRTIGEISWDADVVAQRVIAWLSHSPV
VLRNAEHGFYRRFLKSLALQVRHLRHVAGTVPDGEARLRVRLALAMASVSMPATASAIRRASRNLDLELERQILPDGAHF
SRNPRAGLELLLDLLPLRQTYVNLGHDVPSKLISCIDRMYPALRFFRHQSGELALFNSATSVAAHELASVLRYDETAGEP
FRSLPHAQYERLSLGETVVIVDTGRPLSVDLSRSAHAGCLSFEMSSGRNRFVINSGAPKFAGDRFRQMARTTAAHSTVTL
NDRSSCRFSQSRFLGPIVAGGPSRVAVERKDEPGRMETVKASHDGYVAPFGLLHERDIGILNGGRLIRGRDRLLLEDGGD
PDPEDGSIAIARFHIHPAIGMRRHSESEIYLTAPDGEAWLFACRDGKLAVEEDIFFADPSGVRASSQITVTFAAGDQPEI
QWTFTRAA

Specific function: Unknown

COG id: COG5360

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63121; Mature: 63121

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNLRAPMPLSNKPRFLYLYLREGTRRLERRLSLGRTAAQRYAGSTPVRLIVAPTDLRAI
CCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
DPFVAEEILAGRFPLAGRVLDTEGESAFEIDLPSYEFAIRLHSFGWLRHMRAVQDEAGSA
CHHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCEEEEEEEHHHHHHHHHHHHHHCCCHH
RLRQIVDDWMGSHGRTIGEISWDADVVAQRVIAWLSHSPVVLRNAEHGFYRRFLKSLALQ
HHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
VRHLRHVAGTVPDGEARLRVRLALAMASVSMPATASAIRRASRNLDLELERQILPDGAHF
HHHHHHHHCCCCCCCCEEEEEEEEHHHHCCCCHHHHHHHHHHCCCCEEEHHHHCCCCCCC
SRNPRAGLELLLDLLPLRQTYVNLGHDVPSKLISCIDRMYPALRFFRHQSGELALFNSAT
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHH
SVAAHELASVLRYDETAGEPFRSLPHAQYERLSLGETVVIVDTGRPLSVDLSRSAHAGCL
HHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHCCCCEEEEEECCCCEEEECCCCCCCCEE
SFEMSSGRNRFVINSGAPKFAGDRFRQMARTTAAHSTVTLNDRSSCRFSQSRFLGPIVAG
EEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHCCCCEECC
GPSRVAVERKDEPGRMETVKASHDGYVAPFGLLHERDIGILNGGRLIRGRDRLLLEDGGD
CCCEEEEECCCCCCCEEEEEECCCCEECCCCCEECCCCCEECCCEEEECCCEEEEECCCC
PDPEDGSIAIARFHIHPAIGMRRHSESEIYLTAPDGEAWLFACRDGKLAVEEDIFFADPS
CCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEECCCCEEEECCEEEECCC
GVRASSQITVTFAAGDQPEIQWTFTRAA
CCCCCCEEEEEEECCCCCCEEEEEECCC
>Mature Secondary Structure
MRNLRAPMPLSNKPRFLYLYLREGTRRLERRLSLGRTAAQRYAGSTPVRLIVAPTDLRAI
CCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
DPFVAEEILAGRFPLAGRVLDTEGESAFEIDLPSYEFAIRLHSFGWLRHMRAVQDEAGSA
CHHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCEEEEEEEHHHHHHHHHHHHHHCCCHH
RLRQIVDDWMGSHGRTIGEISWDADVVAQRVIAWLSHSPVVLRNAEHGFYRRFLKSLALQ
HHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
VRHLRHVAGTVPDGEARLRVRLALAMASVSMPATASAIRRASRNLDLELERQILPDGAHF
HHHHHHHHCCCCCCCCEEEEEEEEHHHHCCCCHHHHHHHHHHCCCCEEEHHHHCCCCCCC
SRNPRAGLELLLDLLPLRQTYVNLGHDVPSKLISCIDRMYPALRFFRHQSGELALFNSAT
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHH
SVAAHELASVLRYDETAGEPFRSLPHAQYERLSLGETVVIVDTGRPLSVDLSRSAHAGCL
HHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHCCCCEEEEEECCCCEEEECCCCCCCCEE
SFEMSSGRNRFVINSGAPKFAGDRFRQMARTTAAHSTVTLNDRSSCRFSQSRFLGPIVAG
EEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHCCCCEECC
GPSRVAVERKDEPGRMETVKASHDGYVAPFGLLHERDIGILNGGRLIRGRDRLLLEDGGD
CCCEEEEECCCCCCCEEEEEECCCCEECCCCCEECCCCCEECCCEEEECCCEEEEECCCC
PDPEDGSIAIARFHIHPAIGMRRHSESEIYLTAPDGEAWLFACRDGKLAVEEDIFFADPS
CCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEECCCCEEEECCEEEECCC
GVRASSQITVTFAAGDQPEIQWTFTRAA
CCCCCCEEEEEEECCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA