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The map label for this gene is 150398312

Identifier: 150398312

GI number: 150398312

Start: 3267957

End: 3268535

Strand: Direct

Name: 150398312

Synonym: Smed_3118

Alternate gene names: NA

Gene position: 3267957-3268535 (Clockwise)

Preceding gene: 150398304

Following gene: 150398316

Centisome position: 86.41

GC content: 54.75

Gene sequence:

>579_bases
ATGGGGAAAAACGAAGGCCAGATCGTTATCAAGAAATATGCGAACCGGCGGCTCTACAACACCGGTACGAGCACGTACGT
AACCCTCGATGACCTGGCTGTCATGGTGAAGAGGGGCGAGGACTTCATCGTACAGGACGCAAAGTCCGGCGAAGATATAA
CCCATTCCGTGCTGACGCAGATTATCTTCGAGCAGGAGTCGAAAACCGGTAACACGCTCCTGCCGATTTCCTTTCTCCGC
CAGTTGATCTCCTTTTATGGCGACCAGATGCAGATGGTCGTGCCGAGCTATCTCGAACACTCGATGCAGGCTTTCACCGA
ACAGCAGGCTCAGATGCGCGAGCAGATCACCAAGGCCTTCGGTGAGACGCCGATCGGCAAGAACCTCAAAGTGCCGCTGC
AACTGGTCGAGGAACAGGTCCGGCGCAACACCGAAATGTTCCATCAGGCCATGCAGATGTTCTCGCCCTTCATGGCGGCC
CCAGCCGCAAAAGAAAGCAAGAAGGCCGAAGCGAAAGACATCGACGAATTGAAAGAACAGCTTCGAGCCCTCCAGACGAA
GCTGGATAATCTCGGCTGA

Upstream 100 bases:

>100_bases
CTGCGTCGCCGCATTGCACAAAGAGATTGTCAGTGGCGCTCTTTTGCGGATACTCTGAAAAGTACAATAAAGACGGGACG
ATGGGTAAGAGGAGACCCTG

Downstream 100 bases:

>100_bases
CTTTCAGGCATTCGGAGCCGTACCAAAGAAAAAGGGCCGGCAATGCCGACCCTTCGAATTTCATCCGCGAGTGATATGCG
CTTATGCGCTTTCCTTCGGC

Product: polyhydroxyalkonate synthesis repressor PhaR

Products: NA

Alternate protein names: ORF4 [H]

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MGKNEGQIVIKKYANRRLYNTGTSTYVTLDDLAVMVKRGEDFIVQDAKSGEDITHSVLTQIIFEQESKTGNTLLPISFLR
QLISFYGDQMQMVVPSYLEHSMQAFTEQQAQMREQITKAFGETPIGKNLKVPLQLVEEQVRRNTEMFHQAMQMFSPFMAA
PAAKESKKAEAKDIDELKEQLRALQTKLDNLG

Sequences:

>Translated_192_residues
MGKNEGQIVIKKYANRRLYNTGTSTYVTLDDLAVMVKRGEDFIVQDAKSGEDITHSVLTQIIFEQESKTGNTLLPISFLR
QLISFYGDQMQMVVPSYLEHSMQAFTEQQAQMREQITKAFGETPIGKNLKVPLQLVEEQVRRNTEMFHQAMQMFSPFMAA
PAAKESKKAEAKDIDELKEQLRALQTKLDNLG
>Mature_191_residues
GKNEGQIVIKKYANRRLYNTGTSTYVTLDDLAVMVKRGEDFIVQDAKSGEDITHSVLTQIIFEQESKTGNTLLPISFLRQ
LISFYGDQMQMVVPSYLEHSMQAFTEQQAQMREQITKAFGETPIGKNLKVPLQLVEEQVRRNTEMFHQAMQMFSPFMAAP
AAKESKKAEAKDIDELKEQLRALQTKLDNLG

Specific function: Unknown

COG id: COG5394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012909
- InterPro:   IPR010134
- InterPro:   IPR007897 [H]

Pfam domain/function: PF05233 PHB_acc; PF07879 PHB_acc_N [H]

EC number: NA

Molecular weight: Translated: 21853; Mature: 21722

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKNEGQIVIKKYANRRLYNTGTSTYVTLDDLAVMVKRGEDFIVQDAKSGEDITHSVLTQ
CCCCCCHHHHHHHHCCCEECCCCCCEEEHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHH
IIFEQESKTGNTLLPISFLRQLISFYGDQMQMVVPSYLEHSMQAFTEQQAQMREQITKAF
HHHHHCCCCCCEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GETPIGKNLKVPLQLVEEQVRRNTEMFHQAMQMFSPFMAAPAAKESKKAEAKDIDELKEQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LRALQTKLDNLG
HHHHHHHHHCCC
>Mature Secondary Structure 
GKNEGQIVIKKYANRRLYNTGTSTYVTLDDLAVMVKRGEDFIVQDAKSGEDITHSVLTQ
CCCCCHHHHHHHHCCCEECCCCCCEEEHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHH
IIFEQESKTGNTLLPISFLRQLISFYGDQMQMVVPSYLEHSMQAFTEQQAQMREQITKAF
HHHHHCCCCCCEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GETPIGKNLKVPLQLVEEQVRRNTEMFHQAMQMFSPFMAAPAAKESKKAEAKDIDELKEQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LRALQTKLDNLG
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1396692 [H]