| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is tesA [C]
Identifier: 150398267
GI number: 150398267
Start: 3220815
End: 3221456
Strand: Reverse
Name: tesA [C]
Synonym: Smed_3073
Alternate gene names: 150398267
Gene position: 3221456-3220815 (Counterclockwise)
Preceding gene: 150398272
Following gene: 150398266
Centisome position: 85.18
GC content: 59.81
Gene sequence:
>642_bases ATGGCATTAAAAGACTTTCTGCCCTTTTTATTCGGCCTGACAATGACAATCGTGTTATCGGCGGCGGCTCGTGCCGAGCC CGTAAGCCTCGTCGGCTTCGGCGACAGCCTCATGGCCGGCTATCAGCTTCCCCCTGAAGATGCTTTTCCCACGCGTCTCG AAAAGGCCCTGAAAGGCAAGGGAATCGATGTCACGATCGCCAATGCCGGCGTTTCAGGGGACACGACCTCCGGCGGCCTC GCCCGCATAGACTGGTCGGTCCCGGAGGGAACCGACGGAGTGATCCTGGAGCTCGGGGCCAATGATGCGTTACGCGGCAT CCCGCCGGAAGAGACGCGCAAAAATCTCGAAGCAATGATCGTGCGGCTCAAGAAGCGCGGCATCGCAGTCCTGCTTGCTG GGATGATGGCGCCGCCGAACATGGGGCCGGATTATGGGGAGCGCTTCAACGCCATCTATCCCGAGCTCGCCAAGGAGCAT GACACCGTTTTCTACCCCTTCTTTCTCGATGGCGTCGTCACCGAGGCCGGTCTGAAGCTAGAAGACGGAATGCATCCGAA CGGCGAGGGTATCGCCGTAATGGTCGATCGCTTCCTGCCGACGGCCGAGACCTTCATCCGCACACTTCAGGAAGGAGAGT GA
Upstream 100 bases:
>100_bases TTTTTCAACTCGATGATGGTTTTTGCCACGCGAAAGAGCCCTATATGAAAATCTGATACGGATCACGAAATGAATTGCAC GCCGATTTAGGAACGAACCT
Downstream 100 bases:
>100_bases CGCCAGCGCTTAGCGACATCCACAGTTAAGATAAAGTTAACGTTCCTACGGAACAAATAATGGTTGCGTGCAGGTGCGAT GCGTGATTCGCTTCAAGCAT
Product: GDSL family lipase
Products: NA
Alternate protein names: Aryl-ester hydrolase [H]
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MALKDFLPFLFGLTMTIVLSAAARAEPVSLVGFGDSLMAGYQLPPEDAFPTRLEKALKGKGIDVTIANAGVSGDTTSGGL ARIDWSVPEGTDGVILELGANDALRGIPPEETRKNLEAMIVRLKKRGIAVLLAGMMAPPNMGPDYGERFNAIYPELAKEH DTVFYPFFLDGVVTEAGLKLEDGMHPNGEGIAVMVDRFLPTAETFIRTLQEGE
Sequences:
>Translated_213_residues MALKDFLPFLFGLTMTIVLSAAARAEPVSLVGFGDSLMAGYQLPPEDAFPTRLEKALKGKGIDVTIANAGVSGDTTSGGL ARIDWSVPEGTDGVILELGANDALRGIPPEETRKNLEAMIVRLKKRGIAVLLAGMMAPPNMGPDYGERFNAIYPELAKEH DTVFYPFFLDGVVTEAGLKLEDGMHPNGEGIAVMVDRFLPTAETFIRTLQEGE >Mature_212_residues ALKDFLPFLFGLTMTIVLSAAARAEPVSLVGFGDSLMAGYQLPPEDAFPTRLEKALKGKGIDVTIANAGVSGDTTSGGLA RIDWSVPEGTDGVILELGANDALRGIPPEETRKNLEAMIVRLKKRGIAVLLAGMMAPPNMGPDYGERFNAIYPELAKEHD TVFYPFFLDGVVTEAGLKLEDGMHPNGEGIAVMVDRFLPTAETFIRTLQEGE
Specific function: Favors the hydrolysis of several arylesters [H]
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDSL' lipolytic enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1786702, Length=191, Percent_Identity=36.6492146596859, Blast_Score=120, Evalue=7e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013830 - InterPro: IPR013831 - InterPro: IPR001087 - InterPro: IPR008265 [H]
Pfam domain/function: PF00657 Lipase_GDSL [H]
EC number: =3.1.1.2 [H]
Molecular weight: Translated: 22854; Mature: 22722
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: PS01098 LIPASE_GDSL_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKDFLPFLFGLTMTIVLSAAARAEPVSLVGFGDSLMAGYQLPPEDAFPTRLEKALKGK CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHCCC GIDVTIANAGVSGDTTSGGLARIDWSVPEGTDGVILELGANDALRGIPPEETRKNLEAMI CCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHH VRLKKRGIAVLLAGMMAPPNMGPDYGERFNAIYPELAKEHDTVFYPFFLDGVVTEAGLKL HHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCEE EDGMHPNGEGIAVMVDRFLPTAETFIRTLQEGE CCCCCCCCCEEEEEEEHHCCCHHHHHHHHHCCC >Mature Secondary Structure ALKDFLPFLFGLTMTIVLSAAARAEPVSLVGFGDSLMAGYQLPPEDAFPTRLEKALKGK CHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHCCC GIDVTIANAGVSGDTTSGGLARIDWSVPEGTDGVILELGANDALRGIPPEETRKNLEAMI CCEEEEECCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHH VRLKKRGIAVLLAGMMAPPNMGPDYGERFNAIYPELAKEHDTVFYPFFLDGVVTEAGLKL HHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCEE EDGMHPNGEGIAVMVDRFLPTAETFIRTLQEGE CCCCCCCCCEEEEEEEHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8141782 [H]