Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is 150398251

Identifier: 150398251

GI number: 150398251

Start: 3206770

End: 3207318

Strand: Direct

Name: 150398251

Synonym: Smed_3057

Alternate gene names: NA

Gene position: 3206770-3207318 (Clockwise)

Preceding gene: 150398248

Following gene: 150398255

Centisome position: 84.79

GC content: 65.39

Gene sequence:

>549_bases
ATGCGCAAGAAGGCGTCCGCAAGGAGATCGAGACCATCAACCGTCGTCGTGAAAACCGCCCCGCGCGACCGCCGGCGCGC
GCTCGTGCTTTTCGACGGACACGCGGAACAGGCCGCGATCGGACGAAACGGCATTACGGCGTTCAAGCGCGAAGGCGACG
GGGCGACCCCGCGCGCGGCAATGCGGCTCATCGGCGGCTACATACGGCGCGACCGCGTATCCTTACCCCCGACGCGCCTG
CCGATGCGGAGCGTCCGGCGTGACATGCTCTGGTGCGACGCTCCGCAACACGCGTGCTACAATCGCCCGGTCAGGGCGCC
TTTTCAGGCGGGACATGAAAGCATGATGCGCGAGGATGGGCTCTATGACATCTGCCTCGTCATGGACTGGAACGTCTCCT
GCCGCAGGCGCAATGCGGGCTCGGCCATTTTCTTCCACCTCATCCGCCCCGGTTACGAGCCGACCGAAGGCTGTGTCGCG
ATCAGTCTGACGGCGATGCGGCGACTGATCCGGAACATGCACCGCCGCACGATCGTGAAGGTCGTGTAG

Upstream 100 bases:

>100_bases
CGCGCTTCCGGTGAAACGCAGGCGCGTTAGCCATCGTCATATATGAAAACCCGCTTAAGGTCGCCGCGAGATCGCGGCAA
AACAAGAATTCGTGAGAACG

Downstream 100 bases:

>100_bases
GCTCCGCCCTTGAGTCGCGCTCGCTTTGGCTCCTCATCAGCCTTCCGGCAGACGGTCGTCATGATGCCGGGCGGGCTGAA
CTACGCTAAACCGGATTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MRKKASARRSRPSTVVVKTAPRDRRRALVLFDGHAEQAAIGRNGITAFKREGDGATPRAAMRLIGGYIRRDRVSLPPTRL
PMRSVRRDMLWCDAPQHACYNRPVRAPFQAGHESMMREDGLYDICLVMDWNVSCRRRNAGSAIFFHLIRPGYEPTEGCVA
ISLTAMRRLIRNMHRRTIVKVV

Sequences:

>Translated_182_residues
MRKKASARRSRPSTVVVKTAPRDRRRALVLFDGHAEQAAIGRNGITAFKREGDGATPRAAMRLIGGYIRRDRVSLPPTRL
PMRSVRRDMLWCDAPQHACYNRPVRAPFQAGHESMMREDGLYDICLVMDWNVSCRRRNAGSAIFFHLIRPGYEPTEGCVA
ISLTAMRRLIRNMHRRTIVKVV
>Mature_182_residues
MRKKASARRSRPSTVVVKTAPRDRRRALVLFDGHAEQAAIGRNGITAFKREGDGATPRAAMRLIGGYIRRDRVSLPPTRL
PMRSVRRDMLWCDAPQHACYNRPVRAPFQAGHESMMREDGLYDICLVMDWNVSCRRRNAGSAIFFHLIRPGYEPTEGCVA
ISLTAMRRLIRNMHRRTIVKVV

Specific function: Unknown

COG id: COG3786

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20771; Mature: 20771

Theoretical pI: Translated: 11.92; Mature: 11.92

Prosite motif: PS00063 ALDOKETO_REDUCTASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKKASARRSRPSTVVVKTAPRDRRRALVLFDGHAEQAAIGRNGITAFKREGDGATPRAA
CCCCCCHHCCCCCEEEEECCCCCCCEEEEEEECCCCHHHHCCCCCEEEEECCCCCCHHHH
MRLIGGYIRRDRVSLPPTRLPMRSVRRDMLWCDAPQHACYNRPVRAPFQAGHESMMREDG
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHCC
LYDICLVMDWNVSCRRRNAGSAIFFHLIRPGYEPTEGCVAISLTAMRRLIRNMHRRTIVK
CEEEEEEEECCCCEECCCCCCEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHH
VV
CC
>Mature Secondary Structure
MRKKASARRSRPSTVVVKTAPRDRRRALVLFDGHAEQAAIGRNGITAFKREGDGATPRAA
CCCCCCHHCCCCCEEEEECCCCCCCEEEEEEECCCCHHHHCCCCCEEEEECCCCCCHHHH
MRLIGGYIRRDRVSLPPTRLPMRSVRRDMLWCDAPQHACYNRPVRAPFQAGHESMMREDG
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHHHCC
LYDICLVMDWNVSCRRRNAGSAIFFHLIRPGYEPTEGCVAISLTAMRRLIRNMHRRTIVK
CEEEEEEEECCCCEECCCCCCEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHH
VV
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA