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The map label for this gene is slyA [C]

Identifier: 150398255

GI number: 150398255

Start: 3209812

End: 3210291

Strand: Direct

Name: slyA [C]

Synonym: Smed_3061

Alternate gene names: 150398255

Gene position: 3209812-3210291 (Clockwise)

Preceding gene: 150398251

Following gene: 150398256

Centisome position: 84.87

GC content: 62.5

Gene sequence:

>480_bases
ATGCCCAGGAAACTCGAGTCCGATACGATCGGGATGCTCCTCACCGATGTTTCACGCCTGTTGCGCGGAGCCTTCGATCG
CAAGGTCAACGCGATGAACCTTGGGATCACCCCCGGCGAAGCGCGCACACTGGTCCAGGTGGCCGTTACCGAAGGCATCA
AGCAGGCGGAGATCGCGACCCGGATGGGAATCGAGCCCATGACGCTCTCGGCCTATCTCGACCGGCTCGAAGCAATGGGT
CTTGTCATGCGGATACCGGATCCCGCGGACCGGCGCGCCAAGAACGTCGTCGTAACGGACAAGGCCGACCCGCTCATCAC
CGAGCTGATGTCCGGTCTGCGGGAGATGATGAAAGCCTACACGGAGGATCTGGGGGACGAAGGACGCGAGGTCCTGCGTG
CAAACCTGAGGATTCTCCGTGACAGTCTCCACCGCCTCGATCCATGCCTCGCCGGCAAGGGGAAGGGGGAGGCCGAATGA

Upstream 100 bases:

>100_bases
GACGACTGCAGTGTCTCACAGGAGGAGGGGGTTTGAGCGCGTTGAACGCCCGGAAGGGGTATGATAAGCAAAACTTATTA
TTTTGAACACGATCGGTCAA

Downstream 100 bases:

>100_bases
CGCTCCGGATGAGCGAACGGCGCACGAGCATCATCGGCGCCTTTCTGGTGGCACTCGGCCCTATATCGATGGCGCTCTAC
ACGCCGGCAATGCCGGAGCT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Transcriptional Regulator Protein

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MPRKLESDTIGMLLTDVSRLLRGAFDRKVNAMNLGITPGEARTLVQVAVTEGIKQAEIATRMGIEPMTLSAYLDRLEAMG
LVMRIPDPADRRAKNVVVTDKADPLITELMSGLREMMKAYTEDLGDEGREVLRANLRILRDSLHRLDPCLAGKGKGEAE

Sequences:

>Translated_159_residues
MPRKLESDTIGMLLTDVSRLLRGAFDRKVNAMNLGITPGEARTLVQVAVTEGIKQAEIATRMGIEPMTLSAYLDRLEAMG
LVMRIPDPADRRAKNVVVTDKADPLITELMSGLREMMKAYTEDLGDEGREVLRANLRILRDSLHRLDPCLAGKGKGEAE
>Mature_158_residues
PRKLESDTIGMLLTDVSRLLRGAFDRKVNAMNLGITPGEARTLVQVAVTEGIKQAEIATRMGIEPMTLSAYLDRLEAMGL
VMRIPDPADRRAKNVVVTDKADPLITELMSGLREMMKAYTEDLGDEGREVLRANLRILRDSLHRLDPCLAGKGKGEAE

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17548; Mature: 17417

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRKLESDTIGMLLTDVSRLLRGAFDRKVNAMNLGITPGEARTLVQVAVTEGIKQAEIAT
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHCHHHHHHHH
RMGIEPMTLSAYLDRLEAMGLVMRIPDPADRRAKNVVVTDKADPLITELMSGLREMMKAY
HHCCCCHHHHHHHHHHHHCCHHEECCCCHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHH
TEDLGDEGREVLRANLRILRDSLHRLDPCLAGKGKGEAE
HHHHCHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCC
>Mature Secondary Structure 
PRKLESDTIGMLLTDVSRLLRGAFDRKVNAMNLGITPGEARTLVQVAVTEGIKQAEIAT
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHCHHHHHHHH
RMGIEPMTLSAYLDRLEAMGLVMRIPDPADRRAKNVVVTDKADPLITELMSGLREMMKAY
HHCCCCHHHHHHHHHHHHCCHHEECCCCHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHH
TEDLGDEGREVLRANLRILRDSLHRLDPCLAGKGKGEAE
HHHHCHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA