Click here to switch to the map view.

The map label for this gene is 150398240

Identifier: 150398240

GI number: 150398240

Start: 3195455

End: 3196135

Strand: Direct

Name: 150398240

Synonym: Smed_3046

Alternate gene names: NA

Gene position: 3195455-3196135 (Clockwise)

Preceding gene: 150398239

Following gene: 150398241

Centisome position: 84.49

GC content: 64.02

Gene sequence:

>681_bases
ATGCATGTCGGAAATGCGCGCTATCTCGGTCCGAAGGACTTGCCGGAGATTCTTCCGGTGTTTCCCTTGACGGGCGCGCT
GCTGCTTCCCGCCGCGCAGCTGCCGCTCAACATTTTCGAGCCCCGCTATCTCGCAATGCTCGACGACGCGCTCGCCGGCA
ATCGTCTGATCGGCATCGTCCAGCCCTCCTTCGCGGAAGGCCGCAACGACATCGATTCCTCGCCGGTCCCGGCCCTTTGC
CAGGTGGGCTGCATCGGCCGCATCACCTCTTTCGCCGAAACCGGCGACGGCCGATACATCACTTCGCTAACCGGCGTCTG
CCGTTTCCGGCTCTTCTCCGAGGTCGCCGGCGCCCGCGGCTATCGGCGCTTCCGCATCGGCCCCTTTGCCAGCGATCTCG
AAAACGCGGACGATGAGAGCCTTGTCGACCGGGGCGCCCTTCTGGCGGCCTTCCGTGCCTATCTCGACGCCAACAAGCTC
GAGGCCGACTGGGAAAGCGTGGAACGGGCAAGCAACCGTACCCTCGTCAATTCCATGGCGATGATGTCGCCCTATGGGCC
GGCGGAAAAACAGGCCCTGCTGGAGGCACCCGACCTCAAGACGCGCGCCGAAACGCTGATCGCCATCACCGAGATCGTGC
TCGCCAGGGATTTCGGCGATCTCGACAACATCCTGCAGTGA

Upstream 100 bases:

>100_bases
GGTGCACTCCTTCTTGAGAATTCGGAGTACCGCACCATTTTTTGGTCCTACAGCGCCGCGTGTCGACGAGGCGCGGCCGC
CATCTGCAGGGTCTGTCGGA

Downstream 100 bases:

>100_bases
AAAGAGCATGGACGTCAACGCAAGCAAGGTCGACCCGAAACTCCTGGAACTGCTCGTCTGCCCCCTGACCAAGGGCCGCC
TCAGCTACGATCCGGAAGCC

Product: peptidase S16 lon domain-containing protein

Products: NA

Alternate protein names: ATP-Dependent Protease La Domain Protein; ATP-Dependent Protease La; ATP-Dependent Protease; ATP-Dependent Protease La Domain Subfamily; Peptidase S; ATP-Dependent La Family Protease; ATP-Dependent Proteinase; ATP-Dependent Protease LA 2 Protein; Lon-Like ATP-Dependent Protease La; ATP-Dependent Protease La Domain Protein LonD; Lon-Like Peptidase; ATP-Dependent Protease Lon; ATP-Dependent Protease Family Protein; Lon Family ATP-Dependent Protease; S16 Family Peptidase; ATP-Dependent Endopeptidase Lon

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MHVGNARYLGPKDLPEILPVFPLTGALLLPAAQLPLNIFEPRYLAMLDDALAGNRLIGIVQPSFAEGRNDIDSSPVPALC
QVGCIGRITSFAETGDGRYITSLTGVCRFRLFSEVAGARGYRRFRIGPFASDLENADDESLVDRGALLAAFRAYLDANKL
EADWESVERASNRTLVNSMAMMSPYGPAEKQALLEAPDLKTRAETLIAITEIVLARDFGDLDNILQ

Sequences:

>Translated_226_residues
MHVGNARYLGPKDLPEILPVFPLTGALLLPAAQLPLNIFEPRYLAMLDDALAGNRLIGIVQPSFAEGRNDIDSSPVPALC
QVGCIGRITSFAETGDGRYITSLTGVCRFRLFSEVAGARGYRRFRIGPFASDLENADDESLVDRGALLAAFRAYLDANKL
EADWESVERASNRTLVNSMAMMSPYGPAEKQALLEAPDLKTRAETLIAITEIVLARDFGDLDNILQ
>Mature_226_residues
MHVGNARYLGPKDLPEILPVFPLTGALLLPAAQLPLNIFEPRYLAMLDDALAGNRLIGIVQPSFAEGRNDIDSSPVPALC
QVGCIGRITSFAETGDGRYITSLTGVCRFRLFSEVAGARGYRRFRIGPFASDLENADDESLVDRGALLAAFRAYLDANKL
EADWESVERASNRTLVNSMAMMSPYGPAEKQALLEAPDLKTRAETLIAITEIVLARDFGDLDNILQ

Specific function: Unknown

COG id: COG2802

COG function: function code R; Uncharacterized protein, similar to the N-terminal domain of Lon protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24629; Mature: 24629

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVGNARYLGPKDLPEILPVFPLTGALLLPAAQLPLNIFEPRYLAMLDDALAGNRLIGIV
CCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHCCCHHHHHHHHHHCCCEEEEEE
QPSFAEGRNDIDSSPVPALCQVGCIGRITSFAETGDGRYITSLTGVCRFRLFSEVAGARG
CCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
YRRFRIGPFASDLENADDESLVDRGALLAAFRAYLDANKLEADWESVERASNRTLVNSMA
CEEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHH
MMSPYGPAEKQALLEAPDLKTRAETLIAITEIVLARDFGDLDNILQ
HHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCC
>Mature Secondary Structure
MHVGNARYLGPKDLPEILPVFPLTGALLLPAAQLPLNIFEPRYLAMLDDALAGNRLIGIV
CCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHCCCHHHHHHHHHHCCCEEEEEE
QPSFAEGRNDIDSSPVPALCQVGCIGRITSFAETGDGRYITSLTGVCRFRLFSEVAGARG
CCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
YRRFRIGPFASDLENADDESLVDRGALLAAFRAYLDANKLEADWESVERASNRTLVNSMA
CEEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHH
MMSPYGPAEKQALLEAPDLKTRAETLIAITEIVLARDFGDLDNILQ
HHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA