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The map label for this gene is proX [H]

Identifier: 150398238

GI number: 150398238

Start: 3193751

End: 3194260

Strand: Direct

Name: proX [H]

Synonym: Smed_3044

Alternate gene names: 150398238

Gene position: 3193751-3194260 (Clockwise)

Preceding gene: 150398237

Following gene: 150398239

Centisome position: 84.45

GC content: 57.84

Gene sequence:

>510_bases
ATGAGCAAGGCAGAGCCGAAGACGGCGGAGGACCTGTTCCGTTTTCTGGACGAACTCGGAATCGAACACAGGACGACGCG
GCACGCGCCGGTCTTTACCGTCGCCGAGTCGGTGGCGCTGCGCGATGAAATCCCCGGCGGACATACAAAAAACCTGTTCC
TGAAGGACAAAAAGGACAATTATTTCCTTCTAACCGTCGAGGAGCACGCAACGGTGGACCTGAAGGCCGTTCACCAGATC
ATCGGCGCGGCAAGCAAGGTTTCCTTCGGCAGATCGGAGAAGCTGATGGAGTATCTGGGCGTGATACCGGGCGCCGTCAC
CGCCTTCGGGGCGATCAACGACACCGAAGGCAAGGTGAAGATCATTCTCGACGAGACCCTGATGGCTTTCGACACGATCA
ACTGCCATCCGCTCTCGAACGACCAGACGACCTCGATCGCGTCGAAGGACATGCTGCGCTTCATGGAAGCGACAGGACAC
GAGCCGCTTGTCTTGAAAGTAACGGCCTGA

Upstream 100 bases:

>100_bases
GGATGCCGTTGTTGCGGCGGCGCAATGCCGCGCATGAGATTGCGAAATCTTCCGCCCATCCTTAAACCATGCGGGATATC
GCACGGCAGAAAGGGTGACC

Downstream 100 bases:

>100_bases
CATACGATCTTTGGCGCGAATGCATGAAAACCGGACGCCCGAGTCCGCGAGGAGAGAAGAATGAGCGGTAGCGACAATCC
CTATCAAGGTTCCTTCGGCA

Product: YbaK/prolyl-tRNA synthetase associated protein

Products: NA

Alternate protein names: Prolyl-tRNA deacylase proX [H]

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MSKAEPKTAEDLFRFLDELGIEHRTTRHAPVFTVAESVALRDEIPGGHTKNLFLKDKKDNYFLLTVEEHATVDLKAVHQI
IGAASKVSFGRSEKLMEYLGVIPGAVTAFGAINDTEGKVKIILDETLMAFDTINCHPLSNDQTTSIASKDMLRFMEATGH
EPLVLKVTA

Sequences:

>Translated_169_residues
MSKAEPKTAEDLFRFLDELGIEHRTTRHAPVFTVAESVALRDEIPGGHTKNLFLKDKKDNYFLLTVEEHATVDLKAVHQI
IGAASKVSFGRSEKLMEYLGVIPGAVTAFGAINDTEGKVKIILDETLMAFDTINCHPLSNDQTTSIASKDMLRFMEATGH
EPLVLKVTA
>Mature_168_residues
SKAEPKTAEDLFRFLDELGIEHRTTRHAPVFTVAESVALRDEIPGGHTKNLFLKDKKDNYFLLTVEEHATVDLKAVHQII
GAASKVSFGRSEKLMEYLGVIPGAVTAFGAINDTEGKVKIILDETLMAFDTINCHPLSNDQTTSIASKDMLRFMEATGHE
PLVLKVTA

Specific function: Functions in trans to edit the amino acid moiety from incorrectly charged Ala-tRNA(Pro). Has weak activity on correctly charged tRNA(Ala), tRNA(Gly) as well as tRNA(Cys), tRNA(Met), tRNA(Pro), tRNA(Ser) and tRNA(Leu) [H]

COG id: COG3760

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prolyl-tRNA editing family. ProX subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007214 [H]

Pfam domain/function: PF04073 YbaK [H]

EC number: NA

Molecular weight: Translated: 18641; Mature: 18509

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKAEPKTAEDLFRFLDELGIEHRTTRHAPVFTVAESVALRDEIPGGHTKNLFLKDKKDN
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCC
YFLLTVEEHATVDLKAVHQIIGAASKVSFGRSEKLMEYLGVIPGAVTAFGAINDTEGKVK
EEEEEECCCCCCCHHHHHHHHCCHHHCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCCEEE
IILDETLMAFDTINCHPLSNDQTTSIASKDMLRFMEATGHEPLVLKVTA
EEEECHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEC
>Mature Secondary Structure 
SKAEPKTAEDLFRFLDELGIEHRTTRHAPVFTVAESVALRDEIPGGHTKNLFLKDKKDN
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCC
YFLLTVEEHATVDLKAVHQIIGAASKVSFGRSEKLMEYLGVIPGAVTAFGAINDTEGKVK
EEEEEECCCCCCCHHHHHHHHCCHHHCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCCEEE
IILDETLMAFDTINCHPLSNDQTTSIASKDMLRFMEATGHEPLVLKVTA
EEEECHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10085076 [H]