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The map label for this gene is gpsA [H]

Identifier: 150397890

GI number: 150397890

Start: 2797393

End: 2798409

Strand: Reverse

Name: gpsA [H]

Synonym: Smed_2692

Alternate gene names: 150397890

Gene position: 2798409-2797393 (Counterclockwise)

Preceding gene: 150397891

Following gene: 150397885

Centisome position: 73.99

GC content: 66.37

Gene sequence:

>1017_bases
ATGGCAACCATCCTCATTCTCGGGGCGGGCGTGATGGGTACCGCCCTGGCGGTACCGGCAAGCGATAACGGCCACCGGGT
GCTGTTGGCGGGCACGCCGCTCGATGCCGTCCCGGTCGCCCGGATGAAAGCAGGCGGGATCCACCCGAAGCTCGGCGCGC
CGCTTGCGGGAACGGTCACGATCCTGACGGACGAAGAGCTCGGGCCCGAGCATGCCGAGGCGGCGGATCTGATTGTCGTC
GGCGTCAGCAGCCCGGGCATCGTCTGGGCGGTTGACCGGCTTAATGGCCTGCTGGGCCGGGAAAAGCCGGTCGCCTTCGT
AACGAAGGGGCTCGACCGCGAAGGCGACCGGGTCGTCACCTATGCCGAGACGCTGCCGCCACGGATCGCCGGCATGCAAA
GCTTCATCGGCATCGGCGGGCCCTGCATCGCGCGCGAGCTTGCCGAGCGATATCCGACGTCCAGCATCTATGCCAGCTGC
GACAGGGTTGCGGCGGACTTCGCCGCCGGCCTGATGCGGACACCCTATTACCGGCTTGCATCGAGCGAGGATGTGACCGG
CGTCGAGGCCTGCGCTGCGCTCAAGAACTTTTTCGCGATCGGCGTCAGCACCATGCAGACGCGCTATCCGGACAGGCTGC
GCGCCGATGGCCAATCCAAGAACCCGACGGCGGCCGCGTTCAACCAGGCGGCGCAGGAGATGGCCCTGCTTTGTGAGCGG
ATTGGCGGCAGCCGCGCCTCCGCTTTCGACCTCGCCGGGATCGGCGACCTGCATGTGACGGTCGGCGGCGGGCGCAATAG
CAGGCTCGGCCACGGCCTCGGCCTTGGCCGCACGGTCTCAGACGTCATGTCGGGTGAACTCGCTGGTGAAACGGTCGAAG
GCATCGACACCGCACGGATCGTAGGCTCCTTGTTGCGGCAAATTGAGAATGCCGAAACGCGTCTGCCTCTCGCGACCGCA
ATCACAAGCGCGGTAATGGACGGCGGCACCCTCGCCTTCGATTTTGACCGGATTTAA

Upstream 100 bases:

>100_bases
CCGGACCTCCACCGGAGCAGTCGTTACCGTCGACGGCGGCAACGTTGCCGCGATGATGCGTTGAGGGCGCGCGGGAACAG
GTAAGCGGAGAAACCGAAAG

Downstream 100 bases:

>100_bases
GCTCTTCCAGGAAAGGCCGTAACGGCCTTCCTTGCAGCTCACGATGTCTTTGGGTTGGTCTACCTAGTAGAGCCATCCCT
CCAATTCGCGGCGGACCACA

Product: NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [H]

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MATILILGAGVMGTALAVPASDNGHRVLLAGTPLDAVPVARMKAGGIHPKLGAPLAGTVTILTDEELGPEHAEAADLIVV
GVSSPGIVWAVDRLNGLLGREKPVAFVTKGLDREGDRVVTYAETLPPRIAGMQSFIGIGGPCIARELAERYPTSSIYASC
DRVAADFAAGLMRTPYYRLASSEDVTGVEACAALKNFFAIGVSTMQTRYPDRLRADGQSKNPTAAAFNQAAQEMALLCER
IGGSRASAFDLAGIGDLHVTVGGGRNSRLGHGLGLGRTVSDVMSGELAGETVEGIDTARIVGSLLRQIENAETRLPLATA
ITSAVMDGGTLAFDFDRI

Sequences:

>Translated_338_residues
MATILILGAGVMGTALAVPASDNGHRVLLAGTPLDAVPVARMKAGGIHPKLGAPLAGTVTILTDEELGPEHAEAADLIVV
GVSSPGIVWAVDRLNGLLGREKPVAFVTKGLDREGDRVVTYAETLPPRIAGMQSFIGIGGPCIARELAERYPTSSIYASC
DRVAADFAAGLMRTPYYRLASSEDVTGVEACAALKNFFAIGVSTMQTRYPDRLRADGQSKNPTAAAFNQAAQEMALLCER
IGGSRASAFDLAGIGDLHVTVGGGRNSRLGHGLGLGRTVSDVMSGELAGETVEGIDTARIVGSLLRQIENAETRLPLATA
ITSAVMDGGTLAFDFDRI
>Mature_337_residues
ATILILGAGVMGTALAVPASDNGHRVLLAGTPLDAVPVARMKAGGIHPKLGAPLAGTVTILTDEELGPEHAEAADLIVVG
VSSPGIVWAVDRLNGLLGREKPVAFVTKGLDREGDRVVTYAETLPPRIAGMQSFIGIGGPCIARELAERYPTSSIYASCD
RVAADFAAGLMRTPYYRLASSEDVTGVEACAALKNFFAIGVSTMQTRYPDRLRADGQSKNPTAAAFNQAAQEMALLCERI
GGSRASAFDLAGIGDLHVTVGGGRNSRLGHGLGLGRTVSDVMSGELAGETVEGIDTARIVGSLLRQIENAETRLPLATAI
TSAVMDGGTLAFDFDRI

Specific function: De novo phospholipid biosynthesis; glycerol-3 phosphate formation. [C]

COG id: COG0240

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI33695088, Length=261, Percent_Identity=26.4367816091954, Blast_Score=71, Evalue=1e-12,
Organism=Escherichia coli, GI1790037, Length=308, Percent_Identity=28.8961038961039, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR006168
- InterPro:   IPR006109
- InterPro:   IPR011128
- InterPro:   IPR016040 [H]

Pfam domain/function: PF07479 NAD_Gly3P_dh_C; PF01210 NAD_Gly3P_dh_N [H]

EC number: =1.1.1.94 [H]

Molecular weight: Translated: 35085; Mature: 34953

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATILILGAGVMGTALAVPASDNGHRVLLAGTPLDAVPVARMKAGGIHPKLGAPLAGTVT
CEEEEEEECCHHHHEEEECCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCEEE
ILTDEELGPEHAEAADLIVVGVSSPGIVWAVDRLNGLLGREKPVAFVTKGLDREGDRVVT
EEECCCCCCCCCCCCCEEEEECCCCCEEEEHHHHHHHHCCCCCHHHHHCCCCCCCCEEEE
YAETLPPRIAGMQSFIGIGGPCIARELAERYPTSSIYASCDRVAADFAAGLMRTPYYRLA
EHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEC
SSEDVTGVEACAALKNFFAIGVSTMQTRYPDRLRADGQSKNPTAAAFNQAAQEMALLCER
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
IGGSRASAFDLAGIGDLHVTVGGGRNSRLGHGLGLGRTVSDVMSGELAGETVEGIDTARI
HCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCHHCCCHHHHHHHHHH
VGSLLRQIENAETRLPLATAITSAVMDGGTLAFDFDRI
HHHHHHHHHCHHHCCHHHHHHHHHHHCCCEEEEECCCC
>Mature Secondary Structure 
ATILILGAGVMGTALAVPASDNGHRVLLAGTPLDAVPVARMKAGGIHPKLGAPLAGTVT
EEEEEEECCHHHHEEEECCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCEEE
ILTDEELGPEHAEAADLIVVGVSSPGIVWAVDRLNGLLGREKPVAFVTKGLDREGDRVVT
EEECCCCCCCCCCCCCEEEEECCCCCEEEEHHHHHHHHCCCCCHHHHHCCCCCCCCEEEE
YAETLPPRIAGMQSFIGIGGPCIARELAERYPTSSIYASCDRVAADFAAGLMRTPYYRLA
EHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEC
SSEDVTGVEACAALKNFFAIGVSTMQTRYPDRLRADGQSKNPTAAAFNQAAQEMALLCER
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
IGGSRASAFDLAGIGDLHVTVGGGRNSRLGHGLGLGRTVSDVMSGELAGETVEGIDTARI
HCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCHHCCCHHHHHHHHHH
VGSLLRQIENAETRLPLATAITSAVMDGGTLAFDFDRI
HHHHHHHHHCHHHCCHHHHHHHHHHHCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]