| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is aroK [H]
Identifier: 150397763
GI number: 150397763
Start: 2662646
End: 2663224
Strand: Reverse
Name: aroK [H]
Synonym: Smed_2565
Alternate gene names: 150397763
Gene position: 2663224-2662646 (Counterclockwise)
Preceding gene: 150397769
Following gene: 150397762
Centisome position: 70.42
GC content: 62.18
Gene sequence:
>579_bases ATGAACGATGTGACCGAACCGGTTTCCGCGACGCTGGTCGAAAGGGCCAAGCGCGCCCTCGGTAAGCGCAATCTCGTTTT CATAGGCCTCATGGGGGCAGGTAAATCGGCAATCGGGCGTCTGACCGCGCAGGCGCTTGGCGTCCCCTTCGTCGATTCCG ACCACGAGATAGAGCGCGTCTCGCGCATGACGATCAGCGATCTCTTCGCGACCTACGGCGAGGAAGAATTCCGGGCGCTC GAGGCTCGCGTGCTGAAGCGCCTGCTCAGGTCGGGTCCTCGGGTGGTGTCGACCGGCGGCGGCGCCTATATCAACGAACG CTCGCGGCGGCATATCAAAAGGGGCGGCCTGACGGTCTGGCTCAATGCCGAGCTCGACGTTCTCTGGGAGCGGGTGAACA AACGCGACACCCGGCCGCTTCTGAAGACCGAGAACCCGAAGCAGACGCTCGAAAACCTGATGCGCGCGCGCTATCCGATC TATGCCGAGGCGGATCTGACGGTCCTTTCGCGCGATGTGAAAAAAGAAGCGATGGTCGAGGAGGTTCTCGCCGCCATCGC CGATCACCAGAAAGCATGA
Upstream 100 bases:
>100_bases CCATGTCCCATTGATCGTCCGAGGTGGCCCCCAACGCCTGCGACTTGACGCTCCACCCCGATTTGTCGATACCGGGGGGG AATGGGGAAATTGAAGTGCA
Downstream 100 bases:
>100_bases AACCCATGACCAGCGATGTGATGCCAGCCGCCGAGCGTAAGGTCCGCGTCGATCTTGCGGAGCGTTCCTACGATATCCTC ATCGGCCCCGGCCTGATCGC
Product: shikimate kinase
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MNDVTEPVSATLVERAKRALGKRNLVFIGLMGAGKSAIGRLTAQALGVPFVDSDHEIERVSRMTISDLFATYGEEEFRAL EARVLKRLLRSGPRVVSTGGGAYINERSRRHIKRGGLTVWLNAELDVLWERVNKRDTRPLLKTENPKQTLENLMRARYPI YAEADLTVLSRDVKKEAMVEEVLAAIADHQKA
Sequences:
>Translated_192_residues MNDVTEPVSATLVERAKRALGKRNLVFIGLMGAGKSAIGRLTAQALGVPFVDSDHEIERVSRMTISDLFATYGEEEFRAL EARVLKRLLRSGPRVVSTGGGAYINERSRRHIKRGGLTVWLNAELDVLWERVNKRDTRPLLKTENPKQTLENLMRARYPI YAEADLTVLSRDVKKEAMVEEVLAAIADHQKA >Mature_192_residues MNDVTEPVSATLVERAKRALGKRNLVFIGLMGAGKSAIGRLTAQALGVPFVDSDHEIERVSRMTISDLFATYGEEEFRAL EARVLKRLLRSGPRVVSTGGGAYINERSRRHIKRGGLTVWLNAELDVLWERVNKRDTRPLLKTENPKQTLENLMRARYPI YAEADLTVLSRDVKKEAMVEEVLAAIADHQKA
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Homo sapiens, GI153792148, Length=174, Percent_Identity=28.1609195402299, Blast_Score=69, Evalue=3e-12, Organism=Escherichia coli, GI87082255, Length=164, Percent_Identity=35.9756097560976, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1786587, Length=167, Percent_Identity=26.9461077844311, Blast_Score=66, Evalue=1e-12,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 21525; Mature: 21525
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: PS00267 TACHYKININ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDVTEPVSATLVERAKRALGKRNLVFIGLMGAGKSAIGRLTAQALGVPFVDSDHEIERV CCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHH SRMTISDLFATYGEEEFRALEARVLKRLLRSGPRVVSTGGGAYINERSRRHIKRGGLTVW HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCEEEE LNAELDVLWERVNKRDTRPLLKTENPKQTLENLMRARYPIYAEADLTVLSRDVKKEAMVE ECCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH EVLAAIADHQKA HHHHHHHHCCCC >Mature Secondary Structure MNDVTEPVSATLVERAKRALGKRNLVFIGLMGAGKSAIGRLTAQALGVPFVDSDHEIERV CCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHH SRMTISDLFATYGEEEFRALEARVLKRLLRSGPRVVSTGGGAYINERSRRHIKRGGLTVW HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCEEEE LNAELDVLWERVNKRDTRPLLKTENPKQTLENLMRARYPIYAEADLTVLSRDVKKEAMVE ECCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH EVLAAIADHQKA HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]