Click here to switch to the map view.

The map label for this gene is etfB [H]

Identifier: 150397730

GI number: 150397730

Start: 2630141

End: 2630890

Strand: Direct

Name: etfB [H]

Synonym: Smed_2532

Alternate gene names: 150397730

Gene position: 2630141-2630890 (Clockwise)

Preceding gene: 150397729

Following gene: 150397731

Centisome position: 69.55

GC content: 63.2

Gene sequence:

>750_bases
ATGAAAATACTTGTGACGGTGAAGCGGGTCGTTGACTACAACGTCAAGATCCGGGTGAAAGCGGACGGCAGCGGCGTCGA
GCTTGCCAATGTGAAGATGTCGATGAACCCGTTCGACGAGATCTCGGTGGAAGAAGCGCTGCGGCTGAAGGAAGCCGGCA
AGGCTTCGGAAGTGATCGTCGTCTCGATCGGCCCGGCCAAGGCGGAGGAAACGCTGAGGACGGCGCTTGCCATGGGCGCC
GACCGGGCGATCCTGGTCGAGACAGAGGATCAGGTGGAGCCGCTCGCGGTCGCCAAGATCGTCAAGGGTGTCGCAGAGGC
CGAACAGCCTGGGCTGATCATCGTCGGCAAGCAGGCGATCGACGACGATTCCAACCAGACCGGGCAGATGCTTTCGGCAC
TGCTCGGCTGGGCCCAGGGCACGTTCGCCTCCAAGGTCGAGATCGGCGACGGCAAGGTCAACGTCACCCGCGAGGTCGAT
GGCGGCCTGCAGACGGTGGAACTGAAGCTGCCCGCGGTGGTCACCACCGACCTGCGCCTCAACGAACCGCGCTATGCCTC
GCTGCCGAACATCATGAAGGCGAAGAAGAAGCCGCTCGACAAGAAGAGCCCGGCCGATTTCGGCGTTGACACCAGCCCGC
GGCTGAAGGTGTTGAAGACCGAGGAGCCGTCCGGCCGCAAGGCCGGCGTCAAGGTGAAGACGGTTGCCGAGCTCGTCGAG
AAGCTCAAGAACGAAGCCGGCGTGCTCTGA

Upstream 100 bases:

>100_bases
TGTCTACGGAGCAAAAACGCGTATCGATGTCGCCAACCGACAATCAGGCCGCCCTGTTAAGGCGCATTTTCCTGCGAACG
TTCTTGGAGGGAAAGAATCC

Downstream 100 bases:

>100_bases
GAACGGAAAGGGAGAACTAAACCATGGCCATTCTGCTTCTGGCTGACCACGATAACAGCCACCTTTCCGACCAGACGGCG
AAAGCGCTCACGGCGGCCGC

Product: electron transfer flavoprotein subunit alpha/beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKILVTVKRVVDYNVKIRVKADGSGVELANVKMSMNPFDEISVEEALRLKEAGKASEVIVVSIGPAKAEETLRTALAMGA
DRAILVETEDQVEPLAVAKIVKGVAEAEQPGLIIVGKQAIDDDSNQTGQMLSALLGWAQGTFASKVEIGDGKVNVTREVD
GGLQTVELKLPAVVTTDLRLNEPRYASLPNIMKAKKKPLDKKSPADFGVDTSPRLKVLKTEEPSGRKAGVKVKTVAELVE
KLKNEAGVL

Sequences:

>Translated_249_residues
MKILVTVKRVVDYNVKIRVKADGSGVELANVKMSMNPFDEISVEEALRLKEAGKASEVIVVSIGPAKAEETLRTALAMGA
DRAILVETEDQVEPLAVAKIVKGVAEAEQPGLIIVGKQAIDDDSNQTGQMLSALLGWAQGTFASKVEIGDGKVNVTREVD
GGLQTVELKLPAVVTTDLRLNEPRYASLPNIMKAKKKPLDKKSPADFGVDTSPRLKVLKTEEPSGRKAGVKVKTVAELVE
KLKNEAGVL
>Mature_249_residues
MKILVTVKRVVDYNVKIRVKADGSGVELANVKMSMNPFDEISVEEALRLKEAGKASEVIVVSIGPAKAEETLRTALAMGA
DRAILVETEDQVEPLAVAKIVKGVAEAEQPGLIIVGKQAIDDDSNQTGQMLSALLGWAQGTFASKVEIGDGKVNVTREVD
GGLQTVELKLPAVVTTDLRLNEPRYASLPNIMKAKKKPLDKKSPADFGVDTSPRLKVLKTEEPSGRKAGVKVKTVAELVE
KLKNEAGVL

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=247, Percent_Identity=59.1093117408907, Blast_Score=283, Evalue=1e-76,
Organism=Homo sapiens, GI62420877, Length=232, Percent_Identity=58.6206896551724, Blast_Score=260, Evalue=9e-70,
Organism=Caenorhabditis elegans, GI25141345, Length=253, Percent_Identity=54.1501976284585, Blast_Score=249, Evalue=8e-67,
Organism=Saccharomyces cerevisiae, GI6321646, Length=250, Percent_Identity=51.6, Blast_Score=244, Evalue=7e-66,
Organism=Drosophila melanogaster, GI24651147, Length=246, Percent_Identity=57.3170731707317, Blast_Score=262, Evalue=1e-70,
Organism=Drosophila melanogaster, GI24651145, Length=246, Percent_Identity=57.3170731707317, Blast_Score=262, Evalue=1e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 26649; Mature: 26649

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVTVKRVVDYNVKIRVKADGSGVELANVKMSMNPFDEISVEEALRLKEAGKASEVIV
CEEEEEEEHHHCCCEEEEEEECCCCEEEEEEEEECCCCHHCCHHHHHHHHHCCCCCCEEE
VSIGPAKAEETLRTALAMGADRAILVETEDQVEPLAVAKIVKGVAEAEQPGLIIVGKQAI
EEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECHHC
DDDSNQTGQMLSALLGWAQGTFASKVEIGDGKVNVTREVDGGLQTVELKLPAVVTTDLRL
CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEECCCCEEEEEEEECEEEEECEEE
NEPRYASLPNIMKAKKKPLDKKSPADFGVDTSPRLKVLKTEEPSGRKAGVKVKTVAELVE
CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEHHHHHHHHH
KLKNEAGVL
HHHHHCCCC
>Mature Secondary Structure
MKILVTVKRVVDYNVKIRVKADGSGVELANVKMSMNPFDEISVEEALRLKEAGKASEVIV
CEEEEEEEHHHCCCEEEEEEECCCCEEEEEEEEECCCCHHCCHHHHHHHHHCCCCCCEEE
VSIGPAKAEETLRTALAMGADRAILVETEDQVEPLAVAKIVKGVAEAEQPGLIIVGKQAI
EEECCCCHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEECHHC
DDDSNQTGQMLSALLGWAQGTFASKVEIGDGKVNVTREVDGGLQTVELKLPAVVTTDLRL
CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEECCCCEEEEEEEECEEEEECEEE
NEPRYASLPNIMKAKKKPLDKKSPADFGVDTSPRLKVLKTEEPSGRKAGVKVKTVAELVE
CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEHHHHHHHHH
KLKNEAGVL
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8599534; 12597275 [H]