Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is 150397656

Identifier: 150397656

GI number: 150397656

Start: 2538036

End: 2539391

Strand: Reverse

Name: 150397656

Synonym: Smed_2456

Alternate gene names: NA

Gene position: 2539391-2538036 (Counterclockwise)

Preceding gene: 150397657

Following gene: 150397655

Centisome position: 67.15

GC content: 61.06

Gene sequence:

>1356_bases
ATGAAATCAATGCTGAAAAAGGGCTTGCTCGCCGCGGCGCTGATGGCCTCGACCGCGCCTGCGGCCATGGCGCAGGAATG
CGCGGATGCGGATCGCGTGCCGATCACCTGGTCGACGATTGCCGGCTTCTACACCGATGCGATGGCAGAGCTGGTATCGG
GCTTCGAGGCAGGCCATTGCGTGAAGGTCAATGTCGTCAACATAGACAACTCACAGCTCTACAACAAGCAGGTCATCGAG
ATGGTCGGCCAGACCGGTGCCTATGATGTCGTGACCCTCGAAACCTCGGAGAAGGCGGAATTCGCAGAGAACGGTTTCAT
CCTGCCGATGACCGAATATTTCGCGGACAAGAAGGCGCAGCTCGACGACGTCGCGCCGACGCTCGCTGCTCTGACGACGC
AGTACAAGGATGATGTCTGGGGTCTGCCTTATTACACCTATACGGCCGGATATATCTATCGTGCCGACCTGTTCGACGAT
CCCACGGAAAAGGAGGCCTTCAAGAAGCGCTTCAACTACGACCTGGCCGTGCCGACCACCTGGGCGCAGCACCGCGATAT
CGCCGAGTTCTTCACGCGTAAGGCCGGTGAGACGCTGAAGGGCGAAAAGCTCACCAAGGACTTTTACGGCGTCGGCCTGA
TGGCCGGTCCTTTCCCGGAAATCCAGGACGAGATGTCCGGCGTGCTCTGGTCGCAAGGCGCGGACTGGCTCACCGACGAG
GGCAAGGTGCCGGTCGATGCCGTCGAAAAGGCGATGAACGACTATCTGGAACTGGTCAAGTATGCGCCGCCCGCCGCGCT
CACCGTTACCTATGACGGCGTCATGAACCAGATGAAGGACGGGCAGATCGCCCAGACCTATTCCTTCTTCCTCGACCAAT
GGCCGAATGCAGTGCAGACCGAAACCAGCGTGGCCGGCGCCAAGATGGGCGTCGCCGAGGCGCCGGAGAAGAAGGCCTAT
ATCGGCGGCTTCCTGCTGGCGGTTTCCGCATCCTCCGCCCACCCGAAGGAGGCGATGGACTTCGTCGCCCACATCGGCGG
ACATGATGCGCAGATGGAGTTCGCCAAGGCCGGCGGTACCTCGACGCTGATGAGCGTTCTTTCCGATCCGGCCTTTGCCG
CGCCGGAAAGCCGCGGGAAGACCGGCCACTTTTCAACGCTCCTGGAGATCTTCGACTCGATGAAGGGTTTCCGCTCGAAC
CTGTTCGATACGCCGTTCGGCGCGAAGATCTACAACACGATGCAGATCCCGCTGCAATCGGCCGCTGCCGGTCAGATTTC
GGCGCGCCAGGCCGCCGAACGGCTTGCCGTCGAAGTCGAGAAGATTTGCGGCGGCCCGTGCCCGATCGGCAAGTGA

Upstream 100 bases:

>100_bases
TCGCGGAGCCCGGCCGCACCGGCCGGAAATGCCGGGGAGAACTAGTCTCATAGCCGTGCCGGGGCAGGGAGTCTCCGGCC
AACAACAGGGAGGGAACAAT

Downstream 100 bases:

>100_bases
TCGGACACGTCGCTCAAAGCCTTGCATGGCGGGCGCTCTGCCCGCCATGCGCTTGACCGAAAGGCGCGGGCGGTCCCGCG
CAATCTTCTGGAGGAGTTTG

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: ABC Transporter; Sugar ABC Transporter

Number of amino acids: Translated: 451; Mature: 451

Protein sequence:

>451_residues
MKSMLKKGLLAAALMASTAPAAMAQECADADRVPITWSTIAGFYTDAMAELVSGFEAGHCVKVNVVNIDNSQLYNKQVIE
MVGQTGAYDVVTLETSEKAEFAENGFILPMTEYFADKKAQLDDVAPTLAALTTQYKDDVWGLPYYTYTAGYIYRADLFDD
PTEKEAFKKRFNYDLAVPTTWAQHRDIAEFFTRKAGETLKGEKLTKDFYGVGLMAGPFPEIQDEMSGVLWSQGADWLTDE
GKVPVDAVEKAMNDYLELVKYAPPAALTVTYDGVMNQMKDGQIAQTYSFFLDQWPNAVQTETSVAGAKMGVAEAPEKKAY
IGGFLLAVSASSAHPKEAMDFVAHIGGHDAQMEFAKAGGTSTLMSVLSDPAFAAPESRGKTGHFSTLLEIFDSMKGFRSN
LFDTPFGAKIYNTMQIPLQSAAAGQISARQAAERLAVEVEKICGGPCPIGK

Sequences:

>Translated_451_residues
MKSMLKKGLLAAALMASTAPAAMAQECADADRVPITWSTIAGFYTDAMAELVSGFEAGHCVKVNVVNIDNSQLYNKQVIE
MVGQTGAYDVVTLETSEKAEFAENGFILPMTEYFADKKAQLDDVAPTLAALTTQYKDDVWGLPYYTYTAGYIYRADLFDD
PTEKEAFKKRFNYDLAVPTTWAQHRDIAEFFTRKAGETLKGEKLTKDFYGVGLMAGPFPEIQDEMSGVLWSQGADWLTDE
GKVPVDAVEKAMNDYLELVKYAPPAALTVTYDGVMNQMKDGQIAQTYSFFLDQWPNAVQTETSVAGAKMGVAEAPEKKAY
IGGFLLAVSASSAHPKEAMDFVAHIGGHDAQMEFAKAGGTSTLMSVLSDPAFAAPESRGKTGHFSTLLEIFDSMKGFRSN
LFDTPFGAKIYNTMQIPLQSAAAGQISARQAAERLAVEVEKICGGPCPIGK
>Mature_451_residues
MKSMLKKGLLAAALMASTAPAAMAQECADADRVPITWSTIAGFYTDAMAELVSGFEAGHCVKVNVVNIDNSQLYNKQVIE
MVGQTGAYDVVTLETSEKAEFAENGFILPMTEYFADKKAQLDDVAPTLAALTTQYKDDVWGLPYYTYTAGYIYRADLFDD
PTEKEAFKKRFNYDLAVPTTWAQHRDIAEFFTRKAGETLKGEKLTKDFYGVGLMAGPFPEIQDEMSGVLWSQGADWLTDE
GKVPVDAVEKAMNDYLELVKYAPPAALTVTYDGVMNQMKDGQIAQTYSFFLDQWPNAVQTETSVAGAKMGVAEAPEKKAY
IGGFLLAVSASSAHPKEAMDFVAHIGGHDAQMEFAKAGGTSTLMSVLSDPAFAAPESRGKTGHFSTLLEIFDSMKGFRSN
LFDTPFGAKIYNTMQIPLQSAAAGQISARQAAERLAVEVEKICGGPCPIGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48990; Mature: 48990

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSMLKKGLLAAALMASTAPAAMAQECADADRVPITWSTIAGFYTDAMAELVSGFEAGHC
CHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCE
VKVNVVNIDNSQLYNKQVIEMVGQTGAYDVVTLETSEKAEFAENGFILPMTEYFADKKAQ
EEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHCCEEEEEHHHHCCCCCH
LDDVAPTLAALTTQYKDDVWGLPYYTYTAGYIYRADLFDDPTEKEAFKKRFNYDLAVPTT
HHHHHHHHHHHHHHHCCCCCCCCHHHHHCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCC
WAQHRDIAEFFTRKAGETLKGEKLTKDFYGVGLMAGPFPEIQDEMSGVLWSQGADWLTDE
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
GKVPVDAVEKAMNDYLELVKYAPPAALTVTYDGVMNQMKDGQIAQTYSFFLDQWPNAVQT
CCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHCCCCHHHHHHHHHHHCCCHHHH
ETSVAGAKMGVAEAPEKKAYIGGFLLAVSASSAHPKEAMDFVAHIGGHDAQMEFAKAGGT
HHHHHHHHCCCCCCCCCHHHHHEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHCCCH
STLMSVLSDPAFAAPESRGKTGHFSTLLEIFDSMKGFRSNLFDTPFGAKIYNTMQIPLQS
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEEECCHHH
AAAGQISARQAAERLAVEVEKICGGPCPIGK
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKSMLKKGLLAAALMASTAPAAMAQECADADRVPITWSTIAGFYTDAMAELVSGFEAGHC
CHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCE
VKVNVVNIDNSQLYNKQVIEMVGQTGAYDVVTLETSEKAEFAENGFILPMTEYFADKKAQ
EEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHCCEEEEEHHHHCCCCCH
LDDVAPTLAALTTQYKDDVWGLPYYTYTAGYIYRADLFDDPTEKEAFKKRFNYDLAVPTT
HHHHHHHHHHHHHHHCCCCCCCCHHHHHCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCC
WAQHRDIAEFFTRKAGETLKGEKLTKDFYGVGLMAGPFPEIQDEMSGVLWSQGADWLTDE
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC
GKVPVDAVEKAMNDYLELVKYAPPAALTVTYDGVMNQMKDGQIAQTYSFFLDQWPNAVQT
CCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHCCCCHHHHHHHHHHHCCCHHHH
ETSVAGAKMGVAEAPEKKAYIGGFLLAVSASSAHPKEAMDFVAHIGGHDAQMEFAKAGGT
HHHHHHHHCCCCCCCCCHHHHHEEEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHCCCH
STLMSVLSDPAFAAPESRGKTGHFSTLLEIFDSMKGFRSNLFDTPFGAKIYNTMQIPLQS
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEEECCHHH
AAAGQISARQAAERLAVEVEKICGGPCPIGK
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA