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The map label for this gene is yliB [C]

Identifier: 150397636

GI number: 150397636

Start: 2515634

End: 2517178

Strand: Reverse

Name: yliB [C]

Synonym: Smed_2436

Alternate gene names: 150397636

Gene position: 2517178-2515634 (Counterclockwise)

Preceding gene: 150397637

Following gene: 150397635

Centisome position: 66.56

GC content: 59.74

Gene sequence:

>1545_bases
ATGAAAACGCTTCTTCTTGCGGGCACCGCCCTGCTTGCCATGACCGGTATCGCAACGGCACGCGACATCACCGTCGCGCA
AAGTTCTGACCTGCGCAGCAATAATCCGGGCGTCAATCGCGACGGCAATACCGATAGCGTCATCCTGCACATCGTCGAGG
GACTCGTCGGCTACAACAATGTCGGCGAAGTGAAGCCGCTGCTCGCCGAGAGCTTCGAGATGTCTGCCGATGGGCTGACC
TATACGTTCAAGCTGCGCAGCGACGTGAAATTTCACAACGGCAAAGCGATGACGGCCGACGACGTGGTGTGGAACTGGAC
GCGCTACCTGAAGCCAGAGACGAAATGGACCTGCCTGAAAGATTTCGTGGAAGGCGGGGCCGCGCCTGTGACAGGCGTCA
AGGCAATCGACGCCTCGACCGTCGAGATCACGCTGGCGAAGCCGTCGGCTGTCTTCCTCGGCATGATGTCGCGTCCCGAA
TGCGGCTTCACCGGCATCATCTCGAGCGAATCCCTCGGTGCGGACGGCAGCTTCGTTCAGCCGATCGGGACCGGCCCCTT
CATGTGGGACGAATGGAAGAAGGGCGAATACGTCCATCTCAAGAAATTTGCCGACTATGTCTCGCCGGAAAACGAAGGAA
AGCCGGATGGCATGGTCGGTTCGAAGCGGCCGCTTGCCGACGGCGTCAAGTTCATGGTCATTCCGGACGCTTCGACCGTG
AAGGCAGGTCTGGAATCCGGCGTGCTGGACACGGCTGAAATCTCGCCGGATCTCATTCCCGAATTCCAGGCAAGCGAGAC
GATGCAACTGATTGTCGCGCGCAATAACGGCAAGAACCTCTTTTACATCCAGACTCGGGACAAGGTCCTGAGCAATCCGG
GCGTGCGCCGCGCCATGGCGATGGCGCTCGATCTGGATGAGCTCGTTGCCGCCGCCTCAAACGGTACGGGTGAGGCGAAC
GGCTCGATGGTGTCGCAGGATTCGGTCTTTTTCAGCGACACGCAGAAGAAGCGTCTGCCCTATGACGTCGAAGCCGCCAA
AAAGGAGCTGGCGGATGCCGGCTACAATGGCGAGCCGATCTCGATCATAGCCAATAAGCGCGGCAACGTGCCGAGCTTCC
CGGCTGCGGTCATGGCGCAGGCCATGATGCAGCAGGCCGGCCTCAACGTTCAGATCGAGGTGCTGGACTACGCGACGCAG
GTCGACCGCCGTCGGTCCGGCAATTACCAGGTGATTTCCCAGTCGGTGGCGCCGCGTCTCGACCCGGCCCTCATGTATTC
CTTCTATGTCGGCGACAAGGACAAGAACGCTTCCCTGATGTGGGACGATCCGAAGGCGATCGAGCTGATGAACGCAGCCT
ATGCCGAGGCTGACCAGGCCAGACGCCAGAAGATATTCGATGAGTTTCACGAGCTCATGCTGAAGGAAATGCCGGGGATA
TTCCTCTACGACATGGTCGATGTCTGGGGCGCGACCAGGAAATTGAAGGGCCAGCCCGTCTGGCAGTCGAACGCCCGCCT
TTGGGAAGTGTCAGTCGACGATTGA

Upstream 100 bases:

>100_bases
GGCACGCCGGGTTACACGGTGGCGCTCGAGACCATCGGCAGGCTCTCGCGGGCCTGCTGGGACGGATTCAGTCATAACGA
TCAATAAGAGGGTAGAACAA

Downstream 100 bases:

>100_bases
TCCATCACAGCCGGGCCGGCGGCGATCCCCGACGCCGGCCCTTCCATCATTCATAGATTCGCTCCGGCACGCCGGGCGGT
CTCCTGCGCCTTTCGAGAGG

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 514; Mature: 514

Protein sequence:

>514_residues
MKTLLLAGTALLAMTGIATARDITVAQSSDLRSNNPGVNRDGNTDSVILHIVEGLVGYNNVGEVKPLLAESFEMSADGLT
YTFKLRSDVKFHNGKAMTADDVVWNWTRYLKPETKWTCLKDFVEGGAAPVTGVKAIDASTVEITLAKPSAVFLGMMSRPE
CGFTGIISSESLGADGSFVQPIGTGPFMWDEWKKGEYVHLKKFADYVSPENEGKPDGMVGSKRPLADGVKFMVIPDASTV
KAGLESGVLDTAEISPDLIPEFQASETMQLIVARNNGKNLFYIQTRDKVLSNPGVRRAMAMALDLDELVAAASNGTGEAN
GSMVSQDSVFFSDTQKKRLPYDVEAAKKELADAGYNGEPISIIANKRGNVPSFPAAVMAQAMMQQAGLNVQIEVLDYATQ
VDRRRSGNYQVISQSVAPRLDPALMYSFYVGDKDKNASLMWDDPKAIELMNAAYAEADQARRQKIFDEFHELMLKEMPGI
FLYDMVDVWGATRKLKGQPVWQSNARLWEVSVDD

Sequences:

>Translated_514_residues
MKTLLLAGTALLAMTGIATARDITVAQSSDLRSNNPGVNRDGNTDSVILHIVEGLVGYNNVGEVKPLLAESFEMSADGLT
YTFKLRSDVKFHNGKAMTADDVVWNWTRYLKPETKWTCLKDFVEGGAAPVTGVKAIDASTVEITLAKPSAVFLGMMSRPE
CGFTGIISSESLGADGSFVQPIGTGPFMWDEWKKGEYVHLKKFADYVSPENEGKPDGMVGSKRPLADGVKFMVIPDASTV
KAGLESGVLDTAEISPDLIPEFQASETMQLIVARNNGKNLFYIQTRDKVLSNPGVRRAMAMALDLDELVAAASNGTGEAN
GSMVSQDSVFFSDTQKKRLPYDVEAAKKELADAGYNGEPISIIANKRGNVPSFPAAVMAQAMMQQAGLNVQIEVLDYATQ
VDRRRSGNYQVISQSVAPRLDPALMYSFYVGDKDKNASLMWDDPKAIELMNAAYAEADQARRQKIFDEFHELMLKEMPGI
FLYDMVDVWGATRKLKGQPVWQSNARLWEVSVDD
>Mature_514_residues
MKTLLLAGTALLAMTGIATARDITVAQSSDLRSNNPGVNRDGNTDSVILHIVEGLVGYNNVGEVKPLLAESFEMSADGLT
YTFKLRSDVKFHNGKAMTADDVVWNWTRYLKPETKWTCLKDFVEGGAAPVTGVKAIDASTVEITLAKPSAVFLGMMSRPE
CGFTGIISSESLGADGSFVQPIGTGPFMWDEWKKGEYVHLKKFADYVSPENEGKPDGMVGSKRPLADGVKFMVIPDASTV
KAGLESGVLDTAEISPDLIPEFQASETMQLIVARNNGKNLFYIQTRDKVLSNPGVRRAMAMALDLDELVAAASNGTGEAN
GSMVSQDSVFFSDTQKKRLPYDVEAAKKELADAGYNGEPISIIANKRGNVPSFPAAVMAQAMMQQAGLNVQIEVLDYATQ
VDRRRSGNYQVISQSVAPRLDPALMYSFYVGDKDKNASLMWDDPKAIELMNAAYAEADQARRQKIFDEFHELMLKEMPGI
FLYDMVDVWGATRKLKGQPVWQSNARLWEVSVDD

Specific function: Probably part of an ABC transporter complex that could be involved in peptide import [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787052, Length=393, Percent_Identity=26.7175572519084, Blast_Score=131, Evalue=9e-32,
Organism=Escherichia coli, GI1789966, Length=517, Percent_Identity=26.6924564796905, Blast_Score=124, Evalue=2e-29,
Organism=Escherichia coli, GI1789397, Length=495, Percent_Identity=22.8282828282828, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1789887, Length=493, Percent_Identity=25.7606490872211, Blast_Score=96, Evalue=7e-21,
Organism=Escherichia coli, GI1787762, Length=496, Percent_Identity=21.7741935483871, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1787551, Length=480, Percent_Identity=25, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1787495, Length=517, Percent_Identity=22.6305609284333, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI87081878, Length=482, Percent_Identity=22.6141078838174, Blast_Score=82, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 56193; Mature: 56193

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLLLAGTALLAMTGIATARDITVAQSSDLRSNNPGVNRDGNTDSVILHIVEGLVGYNN
CCEEEEHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
VGEVKPLLAESFEMSADGLTYTFKLRSDVKFHNGKAMTADDVVWNWTRYLKPETKWTCLK
CCCHHHHHHHHHCCCCCCEEEEEEEECCCEECCCCCCCCCHHHHHHHHHCCCCCCHHHHH
DFVEGGAAPVTGVKAIDASTVEITLAKPSAVFLGMMSRPECGFTGIISSESLGADGSFVQ
HHHCCCCCCCCCEEEECCCEEEEEEECCCEEEEECCCCCCCCEEEEECCCCCCCCCCEEC
PIGTGPFMWDEWKKGEYVHLKKFADYVSPENEGKPDGMVGSKRPLADGVKFMVIPDASTV
CCCCCCCCCCCCCCCCEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHH
KAGLESGVLDTAEISPDLIPEFQASETMQLIVARNNGKNLFYIQTRDKVLSNPGVRRAMA
HHHHHCCCCCHHHCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCHHHCCCCHHHHHH
MALDLDELVAAASNGTGEANGSMVSQDSVFFSDTQKKRLPYDVEAAKKELADAGYNGEPI
HHHCHHHHHHHHCCCCCCCCCCEEECCCEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCE
SIIANKRGNVPSFPAAVMAQAMMQQAGLNVQIEVLDYATQVDRRRSGNYQVISQSVAPRL
EEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCEEEEEHHHCCCC
DPALMYSFYVGDKDKNASLMWDDPKAIELMNAAYAEADQARRQKIFDEFHELMLKEMPGI
CHHHEEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
FLYDMVDVWGATRKLKGQPVWQSNARLWEVSVDD
EEHHHHHHHCCHHHCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MKTLLLAGTALLAMTGIATARDITVAQSSDLRSNNPGVNRDGNTDSVILHIVEGLVGYNN
CCEEEEHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
VGEVKPLLAESFEMSADGLTYTFKLRSDVKFHNGKAMTADDVVWNWTRYLKPETKWTCLK
CCCHHHHHHHHHCCCCCCEEEEEEEECCCEECCCCCCCCCHHHHHHHHHCCCCCCHHHHH
DFVEGGAAPVTGVKAIDASTVEITLAKPSAVFLGMMSRPECGFTGIISSESLGADGSFVQ
HHHCCCCCCCCCEEEECCCEEEEEEECCCEEEEECCCCCCCCEEEEECCCCCCCCCCEEC
PIGTGPFMWDEWKKGEYVHLKKFADYVSPENEGKPDGMVGSKRPLADGVKFMVIPDASTV
CCCCCCCCCCCCCCCCEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHH
KAGLESGVLDTAEISPDLIPEFQASETMQLIVARNNGKNLFYIQTRDKVLSNPGVRRAMA
HHHHHCCCCCHHHCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCHHHCCCCHHHHHH
MALDLDELVAAASNGTGEANGSMVSQDSVFFSDTQKKRLPYDVEAAKKELADAGYNGEPI
HHHCHHHHHHHHCCCCCCCCCCEEECCCEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCE
SIIANKRGNVPSFPAAVMAQAMMQQAGLNVQIEVLDYATQVDRRRSGNYQVISQSVAPRL
EEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCEEEEEHHHCCCC
DPALMYSFYVGDKDKNASLMWDDPKAIELMNAAYAEADQARRQKIFDEFHELMLKEMPGI
CHHHEEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
FLYDMVDVWGATRKLKGQPVWQSNARLWEVSVDD
EEHHHHHHHCCHHHCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA