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The map label for this gene is abgB [H]

Identifier: 150397635

GI number: 150397635

Start: 2514061

End: 2515506

Strand: Reverse

Name: abgB [H]

Synonym: Smed_2435

Alternate gene names: 150397635

Gene position: 2515506-2514061 (Counterclockwise)

Preceding gene: 150397636

Following gene: 150397631

Centisome position: 66.51

GC content: 62.93

Gene sequence:

>1446_bases
ATGAACCGGGATGACGTGATGTCGATTGCCGCAGCAATCGAATCGATGAAGCCGGATTTCGTCAGCTTGAGCGACAGCAT
CTGGGATTTCGCCGAGCTCAAATTCGATGAGTGGCGTTCGTCCGGCTTGCTTGCCGCGAGGCTCGAAGACAATGGCTTCT
CCGTTCGGCGCGGCATCGCAGGCATGGACACGGCCTTCATCGGCGAGTGCGGCAGCGGCAAGCCGGTGATCGCTTTCCTG
GGCGAATTCGATGCGCTGGCGGGCATGAGCCAGGCAGCCGGGGTCGCCGAGGCGAAGCCGCTTGTCGACGGGGCAAGCGG
CCATGGCTGCGGCCATAACCTGCTGGGCGTCGGTTCCCTGATGGCGGCGATCGCGCTCGCCCGGCATCTGGAGGCCAACA
ATCTGCCCGGTACTGTTCGCTATTACGGCTGCCCGGGCGAGGAGGGCGGTTCGGGCAAGACCTTCATGGTGCGCGCCGGT
CTGTTCGACGATGTCGACACGGCGCTCACCTGGCACCCGGCACCGTTCAACGGCGTGCGCTCGACAAACAACCTTGCGGT
TCTCGAATATTTCTATCGCTTCAAGGGTGTCGCCGCGCACGCCTCAAATGCTGCCCATCTCGGTCGTTCGGCGCTCGATG
CCGTCGAGCTCATGAATGTCGGCGTCAACTTTCTGCGCGAGCACATGCCACAGGATTGCCGTGTGCATTACGCGATCACC
GATGCAGGCGGCAGGGCGGCGAACGTCGTGCAGGCGAGCGCCGAAGTGCTTTACCTGATCCGCGCACCGGGAATGCCGGA
GGCGCTCAACCTCGCCAAACGGGTCGAGAAGGTCGCCCGTGGTGCAGCCATGATGACCGAGACCGAAGTGGAAATCGTCT
TCGAGACGGCCTCCACCAACCTCTTGCCGAACATCACACTCGAGACGGCCATGCACGAGAATATGGTGGCGCTCGGCCCT
GTCGCCTTCGACACGTCCGATCTGGCTTTCGCCAGATCCATTCAGGAGACCTTCACGGAAGAGGCAATCAAAAGCAGCAT
CCGTCTCTACCAGATCAAGGGCGACGTATTTTCCAATGCCGGCGCCGGCGCGTCGACACCACTGCACCTCGGCCTGCGCG
AATTTGAAGGCCATTCGCACTTCCGTGCGGGCTCGACCGATGTCGGCGATGTCAGCTGGGTTACGCCGACGGCGCAGTGC
TGGACGCCGGCTTGGGCGATCGGCACGAACCCGCATACCTGGCAGGTCGTTGCGCAGGGCAAGAGCCCCATCGCCCACAA
GGCCATGGCGCATGCCGCCAAGACACTTGCAACGACGGGTCTGTCACTGGTCACGTCTCCGGAGCTGGTTGCCGCCGCTA
AGGCGGAATGGTTGGAGAAGACCGGCGGCAAAGCCTATGTCTGTCCCATTCCGGCGGACGTCATGCCGGGGTCTGCGCAT
GCATGA

Upstream 100 bases:

>100_bases
CCCGACGCCGGCCCTTCCATCATTCATAGATTCGCTCCGGCACGCCGGGCGGTCTCCTGCGCCTTTCGAGAGGGTGCATC
GCAATGCGAGGACATGGCCC

Downstream 100 bases:

>100_bases
TCGGCGGCTCGTCTCACTGGCGGCGTTCACGATTTTTCGTCAGGCATCGATCTTTCCCGCCACTTCCATCCGTGGATTGC
GAAATCCCATCGCGATCCAT

Product: amidohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MNRDDVMSIAAAIESMKPDFVSLSDSIWDFAELKFDEWRSSGLLAARLEDNGFSVRRGIAGMDTAFIGECGSGKPVIAFL
GEFDALAGMSQAAGVAEAKPLVDGASGHGCGHNLLGVGSLMAAIALARHLEANNLPGTVRYYGCPGEEGGSGKTFMVRAG
LFDDVDTALTWHPAPFNGVRSTNNLAVLEYFYRFKGVAAHASNAAHLGRSALDAVELMNVGVNFLREHMPQDCRVHYAIT
DAGGRAANVVQASAEVLYLIRAPGMPEALNLAKRVEKVARGAAMMTETEVEIVFETASTNLLPNITLETAMHENMVALGP
VAFDTSDLAFARSIQETFTEEAIKSSIRLYQIKGDVFSNAGAGASTPLHLGLREFEGHSHFRAGSTDVGDVSWVTPTAQC
WTPAWAIGTNPHTWQVVAQGKSPIAHKAMAHAAKTLATTGLSLVTSPELVAAAKAEWLEKTGGKAYVCPIPADVMPGSAH
A

Sequences:

>Translated_481_residues
MNRDDVMSIAAAIESMKPDFVSLSDSIWDFAELKFDEWRSSGLLAARLEDNGFSVRRGIAGMDTAFIGECGSGKPVIAFL
GEFDALAGMSQAAGVAEAKPLVDGASGHGCGHNLLGVGSLMAAIALARHLEANNLPGTVRYYGCPGEEGGSGKTFMVRAG
LFDDVDTALTWHPAPFNGVRSTNNLAVLEYFYRFKGVAAHASNAAHLGRSALDAVELMNVGVNFLREHMPQDCRVHYAIT
DAGGRAANVVQASAEVLYLIRAPGMPEALNLAKRVEKVARGAAMMTETEVEIVFETASTNLLPNITLETAMHENMVALGP
VAFDTSDLAFARSIQETFTEEAIKSSIRLYQIKGDVFSNAGAGASTPLHLGLREFEGHSHFRAGSTDVGDVSWVTPTAQC
WTPAWAIGTNPHTWQVVAQGKSPIAHKAMAHAAKTLATTGLSLVTSPELVAAAKAEWLEKTGGKAYVCPIPADVMPGSAH
A
>Mature_481_residues
MNRDDVMSIAAAIESMKPDFVSLSDSIWDFAELKFDEWRSSGLLAARLEDNGFSVRRGIAGMDTAFIGECGSGKPVIAFL
GEFDALAGMSQAAGVAEAKPLVDGASGHGCGHNLLGVGSLMAAIALARHLEANNLPGTVRYYGCPGEEGGSGKTFMVRAG
LFDDVDTALTWHPAPFNGVRSTNNLAVLEYFYRFKGVAAHASNAAHLGRSALDAVELMNVGVNFLREHMPQDCRVHYAIT
DAGGRAANVVQASAEVLYLIRAPGMPEALNLAKRVEKVARGAAMMTETEVEIVFETASTNLLPNITLETAMHENMVALGP
VAFDTSDLAFARSIQETFTEEAIKSSIRLYQIKGDVFSNAGAGASTPLHLGLREFEGHSHFRAGSTDVGDVSWVTPTAQC
WTPAWAIGTNPHTWQVVAQGKSPIAHKAMAHAAKTLATTGLSLVTSPELVAAAKAEWLEKTGGKAYVCPIPADVMPGSAH
A

Specific function: Required but not essential for aminobenzoyl-glutamate utilization. May participate in hydrolysis of aminobenzoyl- glutamate to aminobenzoate, either alone or in combination with AbgA [H]

COG id: COG1473

COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI58082085, Length=465, Percent_Identity=27.0967741935484, Blast_Score=117, Evalue=4e-26,
Organism=Escherichia coli, GI1787598, Length=472, Percent_Identity=50, Blast_Score=446, Evalue=1e-126,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017145
- InterPro:   IPR010168
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 50942; Mature: 50942

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRDDVMSIAAAIESMKPDFVSLSDSIWDFAELKFDEWRSSGLLAARLEDNGFSVRRGIA
CCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCCCC
GMDTAFIGECGSGKPVIAFLGEFDALAGMSQAAGVAEAKPLVDGASGHGCGHNLLGVGSL
CCCHHHCCCCCCCCCEEEEECCHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHH
MAAIALARHLEANNLPGTVRYYGCPGEEGGSGKTFMVRAGLFDDVDTALTWHPAPFNGVR
HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCC
STNNLAVLEYFYRFKGVAAHASNAAHLGRSALDAVELMNVGVNFLREHMPQDCRVHYAIT
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
DAGGRAANVVQASAEVLYLIRAPGMPEALNLAKRVEKVARGAAMMTETEVEIVFETASTN
CCCCCHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHCHHHEEECEEEEEEEECCCC
LLPNITLETAMHENMVALGPVAFDTSDLAFARSIQETFTEEAIKSSIRLYQIKGDVFSNA
CCCCCCHHHHHHCCEEEECCEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHCCC
GAGASTPLHLGLREFEGHSHFRAGSTDVGDVSWVTPTAQCWTPAWAIGTNPHTWQVVAQG
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEECCCCHHHCCCCEEECCCCCEEEEEECC
KSPIAHKAMAHAAKTLATTGLSLVTSPELVAAAKAEWLEKTGGKAYVCPIPADVMPGSAH
CCCHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHCCCCEEEECCCHHCCCCCCC
A
C
>Mature Secondary Structure
MNRDDVMSIAAAIESMKPDFVSLSDSIWDFAELKFDEWRSSGLLAARLEDNGFSVRRGIA
CCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCCCC
GMDTAFIGECGSGKPVIAFLGEFDALAGMSQAAGVAEAKPLVDGASGHGCGHNLLGVGSL
CCCHHHCCCCCCCCCEEEEECCHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHH
MAAIALARHLEANNLPGTVRYYGCPGEEGGSGKTFMVRAGLFDDVDTALTWHPAPFNGVR
HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCC
STNNLAVLEYFYRFKGVAAHASNAAHLGRSALDAVELMNVGVNFLREHMPQDCRVHYAIT
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
DAGGRAANVVQASAEVLYLIRAPGMPEALNLAKRVEKVARGAAMMTETEVEIVFETASTN
CCCCCHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHCHHHEEECEEEEEEEECCCC
LLPNITLETAMHENMVALGPVAFDTSDLAFARSIQETFTEEAIKSSIRLYQIKGDVFSNA
CCCCCCHHHHHHCCEEEECCEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCHHCCC
GAGASTPLHLGLREFEGHSHFRAGSTDVGDVSWVTPTAQCWTPAWAIGTNPHTWQVVAQG
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEECCCCHHHCCCCEEECCCCCEEEEEECC
KSPIAHKAMAHAAKTLATTGLSLVTSPELVAAAKAEWLEKTGGKAYVCPIPADVMPGSAH
CCCHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHCCCCEEEECCCHHCCCCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 9829935 [H]